Ammodytes marinus (lesser sand-eel): 307248612
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Entry
307248612 CDS
T12006
Symbol
LOC307248612
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ammm
Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ammm03021
]
307248612 (LOC307248612)
Transcription machinery [BR:
ammm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
307248612 (LOC307248612)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
307248612
NCBI-ProteinID:
XP_079881173
LinkDB
All DBs
Position
3:complement(20334416..20354709)
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AA seq
2121 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKTINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLSEDHLSLAQQSSSPLQVILSPYGLNGAITGQAFKMSDHPTQKLIEEWRQFY
PISPNRKEAQEDKMEETDWEDDSLAAVEVLVAGVRMVYPSCLVLFPLSELPAVVPQGSAN
TSGSLCGAQQGQAAHRDPAMSSVTLTPPTSPEETHTDYQPAHRWLKLSSASDGNSSNNTL
HGGKIPRRLATQMVESVWQEYNINRTGHKRKFTTLTNGTCEEESDKTGLWDFVEPAHRPH
CNCSRHKNPKQRSSSTSGHLPSSGQPAQPAPKHKLGDKLEKGDKQQKRPQTPFHHRNSVS
EDQSMEPQTQRLCLRSQEDSSYPSLHHVDTVPSKAPTLHTHGTPADLVGSPPPPPLSPHP
CDHGEGDMTPGGMKNSSTPIHQAFYPPSVEPCLLPQKGSSEGPQLENMPMPLPFPPAYNE
TLEPTVFVGSAINPNEDSTHNPWKYFNLPRKKASSFLTPQLPVDKIRDDSGGGGGTETVV
SVTELMSGSTRPLKVSQELVNTYAQRRNSHLASATGDGERGDEADPYAFVEGDEEFSFTE
KKDKAGAERDGSKKNKGDDGSAGSGDDGQGPSGNKPVASTSLIHENDLAVSYSDLDKIFN
SDEDELAPGSKRAGVGTEDKFGKDAKAALDQLSCISSADLHQMFPTPPSLEQQGYSPMNS
GSKDSLEAGTGLTLLDGSQLNNHFKMEVEEGFCSPKPSEIKDFSFVYKPETCQLLIGCSM
YAPLKMLPSQCMLPIKLPEDCVYTPSWTMGTMGKMELMPSVTNVNLLTKDSNVPSVEPDY
SQTYTPQTHTPFISSAPPSNSATTGILPSPATPRFSVPTPRTPRTPRTPRGPASVQGSLK
YDNSDLYSPASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCV
CVCNMNIRGADVGVYLKDNGEAQYPCTCGFSAVANRRFGQSAGLFLEDELDVVGRGSDSS
RDTERCFEELRASATHKAGSLTEKPPDELILLLQDQCTNPFAPMAGVEYPKPGSATSSFL
RVEERDCYNDCYMALEHGRQFMDNMSGGKVDETLVKTTCLHQWPKCKSTVMSKLFSQDVL
RVLLSLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVG
YEYDFVVLSPFGLPYWEKLLLDPFGSQRDVGYVIICPENEALLGRAKTFFKDLSAIYEAC
QLGQHRPICKSHPEGVLKVGTTEGRSMTEQPLSDWFLKMAARDGNNEAFNKLKLFAQVCR
YDLAPYLSEQSLDSSLLSQRSPVVASPQTSSSSSSSSGPPSTNTTSSSTSSAQPAQINST
PPSSSSGPQTIGGMASGKPSSYTPFGPSGLQGGASQNGPQSNPQGAGGAPENGTSANQAS
VAAEILESTMDRDKVGKPTDGESHAVSYPPAIVVYIVDPFSYEDAEGEVHSSNYTLGLLR
CYMEMLQFLPARIRNAVSVQIVPCQYLLQPVHSGERHLYGQHLKSLAFSVFTQCRRPLPN
STNFKALTGFGPGLAIDMALKDPERPECLRLYTPPFILAPIKDKQTELGETFGEAAQKYN
VLFVGYCLSHDQRWLLASCTDQHGELLETCIISIDVPNRARRKKGSARRVGLQKLWEWCL
GLVQVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRLCGISAADTPS
ILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAM
VQVNTNTSEPIDINFNPINPDGSDGMGLFDLFDNDMVDPDLINILPNSPTTSPVHSPGSH
YHQGGDGSKGQSADRMESHEEALNILQQPMALGYFVSTAKAGPLPDWFWSACPQAQNQCP
LFLKASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRR
SCLPVHFVVLTQMYNFIMNML
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggattgccactccaacctcttc
tgtctggccgatttgactggaataaaatggcgacgttttgtgtggcaaggacccacctct
tcgcccatccttttccctgtgaccgaagaggaccctatattgtgtagtttcagccgatgc
ctggcggcagacgtgctgagtgtgtggagaaggcaccacaccccaggtcgcagagagctc
tggcttttctggtggggggatgaccctagttttgccgagctgatccacaatgagctctca
agtgaggaggatggcgagtgggagagcggcctgtcctatgagtgtcggacactcctgttc
aaggccatccacaacctgctggagcgctgtctcatgaaccgcggcttcgttcgcatcggg
aagtggtttgtcaagccataccagaaggaggagaagaccattaataaaagcgagcacttg
tcttgcgcattcaccttcttcgtacacggtgacagcaacgtgtgcacgagtgtggagatc
gcccaacatcagcctcttcagcgactgagcgaggatcatctcagcctcgcccagcagagc
tccagccctctgcaagtcatcctgagcccgtacggattgaatggggccatcaccggacag
gcctttaagatgtcagaccaccccactcagaagctcatagaagagtggaggcagttttac
cccatcagccccaaccgcaaggaagcccaggaggacaagatggaggagacggactgggag
gatgactccttggcagctgtggaggtccttgttgcgggagttaggatggtgtacccttcc
tgcctggtgctcttccccctgtcggagctgcctgctgtggtccctcagggctcggccaac
acctcaggaagcctgtgtggagctcagcagggccaggccgctcacagagaccccgccatg
tcctctgtcactctgactccgcccacgtcaccagaggagactcataccgactatcagccc
gcccaccggtggctcaagttgtcctctgcgtccgatggcaacagctccaacaacactctg
cacgggggtaaaatccctcgcaggctggccacacagatggtggagtccgtgtggcaggag
tataacataaaccgtacaggacacaagaggaagtttacaacattgaccaatgggacctgt
gaggaagagtcagacaaaactggactttgggatttcgtggagcctgctcacaggccacat
tgcaactgctcaagacataagaatccgaagcagcgatccagcagcacctcaggacacctg
ccctcatcgggccagcccgcacagccggcccccaagcacaagctgggcgacaagctggag
aagggcgacaagcagcagaagaggccgcagacgcctttccaccaccgcaactctgtgagc
gaagatcagtctatggagccgcagacccagaggctgtgtttacgatcccaggaggacagc
tcctatcccagcctgcaccacgtggacacggtcccttccaaagccccaacgctgcacaca
cacggcacgcccgccgacctggtgggctccccgccgccccctcccctcagcccgcacccc
tgcgatcacggcgaaggagacatgaccccgggcggcatgaagaactcatccacacccatt
caccaagcgttctacccgccgtcagtggagccctgtctgctaccgcaaaagggctcgtct
gaggggccccagctggagaacatgcctatgcccctgcccttccccccagcctataacgaa
accctggagcccacggtctttgtgggctcagccatcaaccccaacgaggactccacccac
aacccctggaagtacttcaacctgcccaggaagaaggcctccagcttcctgacgccccag
ctacctgtggataaaatacgagatgattctgggggaggcggaggaacggaaactgtggtg
tcggtcactgaattgatgtcgggctccacaaggccccttaaggtgtcccaggagctggtc
aatacttacgcccagcggagaaacagccatctggcctcggccacgggagacggagaacgc
ggcgatgaggccgacccgtacgccttcgtagagggagacgaggagttcagcttcacagag
aagaaagacaaggccggagccgagagggacggcagcaagaagaacaagggggacgatgga
tctgcaggctcgggagacgatggtcagggtccatcaggtaataaacctgtagcctcgacc
agcctcatccacgagaacgacttggccgtgtcctacagcgacctggataaaatcttcaat
tccgacgaagatgaactagcgcctggatccaaaagagctggagttggcacagaggacaag
tttggcaaagacgcgaaagcagcgttggaccagctgtcttgcataagctcggcagacctg
caccagatgtttcccaccccgccctctctagagcagcaaggttactctcccatgaactcc
gggagcaaggatagcctggaagcagggacgggcctcacactgttggacggcagccagctc
aacaaccacttcaagatggaggtggaggagggattctgcagccctaagccatctgaaata
aaggacttctcctttgtgtacaagccggagacgtgtcaattgttgattggctgctccatg
tacgcacccctgaagatgctacccagccagtgtatgttgcctatcaaactgccagaagac
tgtgtatacacgcccagctggaccatgggtaccatgggtaaaatggaactgatgccatca
gtgacgaatgtcaatctcctcaccaaagacagtaacgtccctagtgtggagcccgactac
agccagacctacacccctcagacccacacacccttcatcagcagtgcgccccccagcaac
agcgcgaccacaggcatcctgccctcgccggccacgccgcgcttctccgtgcccacgccg
cgcacaccacgcactccgcgcacgccccgcggccccgccagcgtccagggctcgctcaag
tacgacaactctgacctgtactcccccgcctccaccccttccacctgccgaccactcagc
tcggtggagccggccaccgtcccctccatccccgaggctcacagtctctacgtcaccctc
atcctctccgagtcggtcatgaacctcttcaaggactgcaactttgacagctgctgcgtg
tgcgtctgcaacatgaacatcagaggagcggacgtgggcgtgtacctaaaagacaacggc
gaggcccagtacccctgcacttgtggcttcagcgcagtcgccaaccgacgcttcggtcag
tcggccgggctgtttctggaggacgagctggacgtggtgggacgtggctccgactctagt
cgggacacggagcgctgctttgaagagctgcgagcttccgccacgcacaaagcaggcagc
ctgacggagaaacctcccgacgagctgattctgctgttgcaggaccagtgcaccaaccct
tttgccccgatggcgggtgtggagtacccaaagcccggctcagccaccagttcatttctg
cgggtggaagagagagactgttataatgactgttacatggcacttgagcatggcaggcaa
ttcatggacaatatgtcaggaggcaaagtagacgaaacactagtgaaaaccacctgtctt
catcagtggccaaaatgcaaatcaacagtgatgagcaagctgttctctcaggacgtcctg
cgggtgttgttgtccctccagcctgttttgcaggacaccattcagaagaagaggagtgtg
cgctcgtggggcgttcagggaccgctcacctggcaacagttccacaagatggctgggagg
ggatcatatggtacagatgagtctcctgagcctctgcccatccccacctttttggttggt
tacgagtatgattttgtggtgctgtctccttttgggttgccctactgggaaaagcttctt
ctggatccttttggttcccagagagatgtaggatacgttatcatctgcccagaaaacgaa
gctctgctcgggagagcaaagaccttcttcaaagatctgagtgccatatatgaggcatgc
cagcttgggcaacacaggcccatctgtaagagtcacccagagggtgtattgaaggtcggt
accacagaaggcaggagcatgacagagcagccccttagtgactggttccttaagatggct
gccagagacggaaacaatgaagcctttaataaactcaaactctttgctcaagtgtgccgc
tatgatctagctccatacctgtcagaacagtcattggatagctctctgttgtcgcagcgc
agccccgttgttgcctccccccagacctccagctcttccagcagctcctcaggacccccg
agcaccaacaccaccagctccagcaccagctctgcccagcctgcccagatcaacagcacc
cctccctcctcctcctcaggcccccagactattgggggaatggcctctggcaagccaagc
tcttacacgccttttgggccgtcaggcttgcagggcggcgcctctcagaacggaccccag
tctaatccgcagggcgcagggggggcgccagaaaacggaacctctgccaaccaggcttca
gtggccgctgaaatactagagagcacaatggatagggacaaggtggggaagccaacggac
ggagagtcccacgctgtgtcttacccacctgccatcgtggtctacatcgtggaccccttc
agttacgaggacgcagagggagaggtccactccagcaactacacactgggcctgctgcgc
tgctacatggagatgctccagttcctgcctgctcgcatcagaaacgctgtctcagtacag
atcgttccctgccagtatctgctgcagcccgtgcacagtggcgagcgtcacctctacggc
cagcacctcaagtcgctggccttctccgtcttcactcagtgccggcggcctctgcccaac
tccaccaacttcaaggctctgacgggctttggccctggtctggccatcgacatggccctc
aaggacccggagcggcccgagtgtctgcgtctgtatacgccacccttcattttggctccg
ataaaagacaagcagactgagctcggggagacgtttggcgaggcggcccaaaagtacaac
gtcctgtttgtgggctactgcctgtcacacgaccagcgctggctgctggcttcctgcacc
gaccaacacggagagctgctggagacctgcatcattagtatcgatgtacccaatagggcc
cgcaggaaaaagggttcagcaaggagagtgggtttgcagaagctgtgggagtggtgtctc
ggcctggtgcaggtgacatcgctgccatggagggtggtgattggacggcttggtagaatg
ggccatggcgagctgagagactggagtattctgctgagcaggaggaacctgcagtctctc
agtaaacgtctgaaggagacatgtcggttgtgtggcatctccgctgccgatactcccagc
atccttagcgcttgtctggttgccatggagccccagggttcctttgtcatcatgccagat
tctgtgtccacgggttcagtgtttggccgcagcaccacactcaacatgcagacgtcgcag
ctgagcacgcctcaggacacgtcctgcacacacatcctggtgttccccacctcggccatg
gtgcaggtcaacactaacacgtcggagcccatcgacatcaacttcaaccccataaatcct
gatggttctgatggaatgggcctctttgacctgtttgacaacgacatggtggatccagac
ctcatcaacatcctgcccaactcccccaccacctcgcccgttcactctcccggctcccac
taccaccagggaggggacggaagcaagggtcagagtgcagatcgtatggagtcccacgag
gaggctctgaatatcctgcagcagccgatggctcttggctacttcgtctccacagccaag
gctggaccactgcctgactggttctggtcggcctgccctcaagcccagaaccagtgtcca
ctcttcctcaaggcctctctgcacctgcacgtgtcttctgtccaatcagacgagcttctg
cacagtaagcactcccaccccctggactccaaccacacttccgatgtgctcagatttgtt
ctggagcaatacaacgccctctcctggctgacgtgcgaccctgcgacccaggaccggcgc
tcctgtctgcccgttcactttgtggtgctcacccagatgtacaactttatcatgaacatg
ctctga
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