KEGG   Ammodytes marinus (lesser sand-eel): 307249239
Entry
307249239         CDS       T12006                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein isoform 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ammm  Ammodytes marinus (lesser sand-eel)
Pathway
ammm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ammm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    307249239 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ammm03000]
    307249239 (tbp)
   03021 Transcription machinery [BR:ammm03021]
    307249239 (tbp)
Transcription factors [BR:ammm03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    307249239 (tbp)
Transcription machinery [BR:ammm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     307249239 (tbp)
  RNA polymerase III system
    TFIIIB
     307249239 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     307249239 (tbp)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 307249239
NCBI-ProteinID: XP_079882008
LinkDB
Position
1:complement(24672507..24678024)
AA seq 301 aa
MDQNNSIAGFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVQNTNSLSILEEQQRLQQQ
QQAQQANAGLPGTSGQTPQLYNSQAVGGSTTTALPGNTPLYNTPLTPMTPITPSTPASES
SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK
MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ
QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atggaccaaaacaacagcatcgcaggatttcaggggctggcctcccctcagggtgccatg
actcctggcatgccaatcttcagtcccatgatgccatatggctcaggtcttacaccccag
cctgtccagaacaccaacagtttgtctatactggaggagcagcagaggctacagcagcaa
caacaggcacaacaggcaaacgcaggccttcctggaacgtcggggcagacccctcagctt
tataactcccaggcggtaggaggctcgaccaccacagcactgccaggaaatacccccctc
tacaacaccccgctcacccccatgacccctatcacgccaagtacaccagcctcagaaagc
tctggaatcgtaccacagctacaaaacatagtgtctactgtaaatctgggctgtaaacta
gatttgaagaccatcgccctgagagccaggaatgcagagtacaacccaaagcgttttgct
gccgtcatcatgagaatacgagaacccaggacgactgctctcatctttagctctgggaag
atggtctgcactggagccaagagtgaggaacagtcaaggttagctgccagaaaatatgct
cgtgtggtgcagaagctcggttttcctgctaagttcctggacttcaagattcagaacatg
gtgggaagctgcgatgtgaagttccccattcggttggagggattagtcctcacacatcaa
cagtttagcagctatgaaccagagctttttcctggactgatttacagaatgatcaaaccc
aggatcgtcctgctcatctttgtttctgggaaagttgtacttacaggtgccaaagtgaga
gcagagatctacgaggcgtttgaaaacatctatcccatcctgaaaggtttccgcaagacc
acgtag

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