Ammodytes marinus (lesser sand-eel): 307249531
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Entry
307249531 CDS
T12006
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b isoform 1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307249531 (scn8ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ammm04040
]
307249531 (scn8ab)
Ion channels [BR:
ammm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
307249531 (scn8ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
HpsJ
IQ
GPHH
DUF6739
Motif
Other DBs
NCBI-GeneID:
307249531
NCBI-ProteinID:
XP_079882419
LinkDB
All DBs
Position
4:complement(30734156..>30778306)
Genome browser
AA seq
1984 aa
AA seq
DB search
MAAPLMAPPGPDSFKLFTPESLSNIEKRIAEEANKKPPKPRSDSSHRDTSDENEVKPNSD
LEAGRGLPFIYGDVPPGYFATPLEDLDPYYLNKKTFIVINRGKTIFRFSATSSLYIIPPF
NLFRRIAIKILIHSYPFNMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLTKI
VARGFAIDGFTFLRDPWNWLDFMVISMAYITEFVNLGNVSALRTFRVLRALKTISVIPGL
KTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINMTEQYLSNGT
RGFDWGEYIMNDTNFYFLPNQLDGLLCGNSSDSGRCPEGFTCMKAGRNPNYGYTSFDSFG
WAFLTLFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQ
NQATIEEAEKKEEEFKAMLEQLKRQQEETQAAAMATSAGTVSEAALEEEGGGQLSRSSSE
VSKLSSKSAKERRNRKKKSRQKEQEKEKGDSEKVVKSESDDGSKKSTIRFPGSRLGRKTS
IMNQSLLSIPGSPFMSRHNSRSSIFSFKGRSKDMGSENEFADDEHSTVEESEERRGSLFI
PYRRNSYSGFSQGSSRIHPLAAQQSGGKRNSTVDCNGVVSLIGPGTGRRLLPEVKIDKAA
TDDIQTDVEIKKKHSGSLMVSVDQLNSSFKEKDRANSQMSVVTNTLLEELEESQRKCPPF
WYKFANIFLIWECFPFWLKIKHVVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFE
GVLSVGNLVFTGIFAGEMFAKLVAMDPYYYFQGGWNCFDGFIVTLSLVELGLADVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
DCVCKIALDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEPNNLQLAMARIKIGIAWFKVNMRLFMDTV
IKKQPIEDEQKPLDEMYEKKLNCIANHTVDINRELDYAKNGNGTTSGIGSSVGKYMIDED
YMSFIHNPNLTVCVPIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDV
DDVAVVEVVEEYLDPSACWTPECIAKYPCCDTPITFGWGKHWWFLRKTCYLIVEHNWFET
LIIFMILLSSGALAFEDVYIEQRKTIKIILEYADRVFTYIFILEMLLKWVAYGFHKYFTN
AWCWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCYNATSQENFLPDEVNNKTECFNLINA
NHSEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAIDSRRVEDQPIYEDNLYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPANKVQGMVFDFVTQQVFDISIMILICLNMVTMMVETDDQSDETEEVLYWVNFFFI
VVFTGEFLLKIFSLRQYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLA
RIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVRHGAGI
DDMYNFETFGNSMIILFMITTSAGWDGLMLPILNYPPDCDPLLENSGTPNQGDCGNPSVG
IFFFVMYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFATFYEIWEKFDLDACQF
ITYSKLSDFADALEHPLRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGEL
DMLRQQMEERFVAANPSKVSYEPITTTLRRKQEEVSARIIQRSFRAYLARKGFVFKRKRV
NNKVENGGNDKEPEKKEGTPSTASLPSYDSVTKPGKEKQDDNNEGKGGKKEKGRNQKDIR
ESKC
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcccttaatggcacccccaggacctgacagcttcaagttattcaccccggag
tcgctcagtaacatcgagaagcgcatcgccgaagaggcaaacaagaagccacccaagccc
cggtcggacagtagtcaccgtgacacgtctgacgagaatgaggtcaagcccaacagtgac
ttggaggccgggaggggcctgccgttcatctacggcgatgttcctcccgggtattttgcc
acaccgctggaagatttggacccgtactatttgaacaagaaaacatttatagtcataaac
agagggaaaacaatcttccgcttcagtgccacgtcctccttgtacatcataccccctttt
aatttatttaggcgaatagctattaagatcttgatacactcatatcctttcaacatgatc
atcatgtgtacgattttgaccaactgtatattcatgacctttagtgaccccccagagtgg
tccaaacaagtagagtataccttcacgggtatctatacgtttgagtcgctcacaaaaatt
gttgctcgaggcttcgctatagatgggttcacctttctcagagacccatggaactggctg
gatttcatggtcatctccatggcgtatataacagagtttgtaaacctaggcaatgtgtca
gctctgcgtacgttcagggttctgagggctttgaaaacaatttcagttatcccaggcctg
aagaccattgtgggtgctctgatccagtctgtgaagaagctttcggatgtgatgatcctg
accgtcttctgtctcagcgtcttcgctctgatcggactgcagctcttcatggggaacctg
cggaacaagtgtgtcatctggcccattaacatgaccgagcaatatctctccaacggtacc
aggggctttgactggggagaatacatcatgaatgacactaatttctacttcctacctaat
cagctagatggtctactctgtggtaatagttctgactctggacgatgtccagagggcttt
acatgtatgaaagcaggaaggaaccccaactatggttacaccagctttgacagcttcgga
tgggctttcctcaccctctttcgcctcatgactcaagacttctgggaaaatctctacatg
ctgactctgcgggctgcggggaagacctacatgatcttctttgtgctggtcatcttcgtg
ggctccttctacctggtgaatctcatcctggctgtggtggccatggcttatgaggagcag
aaccaggccaccatcgaggaggcggagaagaaggaggaagaattcaaggccatgctggag
cagctcaagaggcagcaggaggagacacaggctgctgccatggcgacgtctgcaggcacg
gtgtcggaggctgcgttagaggaggaaggaggggggcagttgtcccgtagctcgtccgag
gtctccaaactgagctccaagagcgccaaggagcggcgaaatcgcaagaagaaatcgcgt
cagaaagagcaggagaaagagaaaggagacagtgagaaagtcgttaagtctgagtcggac
gacggcagcaagaaaagcaccattcgtttcccgggaagccgactggggaggaaaacatcc
atcatgaaccagtcactactcagcatcccaggctcgcccttcatgtcacgccacaacagc
cggagcagcatcttcagcttcaaaggccgctccaaggacatgggctccgagaacgagttc
gccgacgacgagcacagcacggtggaggagagcgaggagcgccgaggctccctgtttatc
ccgtaccgccgcaacagctacagtggcttcagtcaaggctcgtcacgcatccacccactg
gcagcccaacagtctggaggcaagaggaacagcacagtggactgcaatggcgtggtgtcg
ctcatcggccctgggaccggcagacgacttctgcctgaggtgaaaatagataaggcagcc
actgatgacatacagacggacgtggagattaagaagaagcactctggctctctcatggta
tctgtggaccagctcaactcctcctttaaagagaaggaccgtgccaacagtcagatgagc
gtggtcaccaacacactgctagaggagttggaggagtctcagagaaagtgtcctcccttt
tggtacaaatttgccaacatcttcctcatctgggagtgcttccccttttggctaaagatc
aagcacgttgtctacttgattgtcatggacccatttgttgacctggccatcaccatctgt
atcgtcctcaacaccctcttcatggccatggagcactacccaatgactgaacaatttgag
ggggtcttgtctgttggcaacctggttttcacaggaatctttgccggggagatgtttgcc
aagctggtggctatggatccttactactacttccaggggggctggaactgctttgacggc
ttcattgtgaccctgagtttagttgagctgggactggctgacgtggaaggtctgtcagtg
ctcaggtcattccgattgttgagagtgttcaaactggccaaatcgtggcccaccctcaac
atgctgatcaagatcatcggtaactcggtgggagctctgggtaacctgaccctggtgctg
gccatcattgtcttcatcttcgccgtggtgggcatgcagctgtttggcaaaagctacaag
gactgcgtgtgtaagatcgccctggactgtgaactgcctcgctggcacatgcacgacttc
ttccactccttcctgattgtgttcagagtgctgtgtggcgagtggatcgagaccatgtgg
gactgtatggaggtggccggacagaccatgtgcctcaccgtcttcatgatggtcatggtc
attggaaacctggtggtgttgaacctgttcctggctctgctgctgagctctttcagcgcg
gacaacctcgccgccacagatgacgacggtgagcccaacaacctccagctcgccatggcc
cgcattaagatagggatcgcctggttcaaggttaacatgcgcctctttatggacacagtc
atcaagaagcagcccatagaggatgaacagaagcctctggatgagatgtacgagaagaag
ctcaactgcatcgcgaaccacacagtggacatcaaccgtgaactggactatgctaagaat
ggcaacggcaccaccagcggcattggaagcagtgtgggaaagtatatgatcgacgaggac
tacatgtccttcatccacaaccccaacctcactgtctgtgtccctatcgcggtcggcgag
tcagactttgaaaacctaaacacggaagacttcagcagtgaatcggacgtggagaacagt
aaagatctggatgacaccagttcatctgagggcagcaccatagacatcaagcctgatgtg
gacgatgttgcggtggtggaggtagtggaagagtatcttgacccatcggcctgttggaca
cctgagtgtattgccaaatacccgtgttgtgatactcccatcacgttcggctggggaaaa
cattggtggttcctgaggaagacctgctacctgattgtggaacacaactggtttgaaacc
ctcatcatcttcatgatcttgctcagcagtggagccctggcctttgaggatgtgtacatt
gagcagaggaagaccatcaaaatcattttggagtatgctgaccgagttttcacctatatc
ttcatcctggagatgttgctaaaatgggttgcctacggctttcacaagtacttcactaac
gcttggtgctggttggacttctttattgtggatgtgtcaatagtcagccttatagctaat
gcattgggctactccgatctagggccgattaaatcactcaggacactgagggccttgaga
cccctcagggccctgtcacgttttgaagggatgagggttgtggtgaacgccctggtgggt
gccatcccctccatcatgaatgtactgctggtgtgtcttatcttctggctcatcttcagc
atcatgggtgtgaacctgtttgctggaaagtattactactgttacaacgctacatctcag
gagaacttcctccctgacgaagtcaacaacaaaacagagtgtttcaatctcatcaatgca
aaccacagtgaagtcagatggaaaaacgtcaagatcaattttgacaatgtgggtgcggga
tacctggccctcctgcaagtggcgacattcaaaggatggatggatattatgtacgcagca
attgattctaggagggttgaagaccagcctatctatgaggacaacttatacatgtacatc
tactttgtcatcttcatcatctttggctcgttcttcaccttaaacctcttcattggtgtc
atcatcgataacttcaaccaacagaagaaaaagttcggaggtcaggatatcttcatgacg
gaagagcagaaaaaatactacaatgccatgaagaaactagggtcgaagaagccacagaaa
ccaatacccaggcctgcgaacaaagttcagggcatggtgtttgactttgtgacgcagcag
gtgttcgacatctccatcatgatcctcatctgtctcaacatggtcaccatgatggtggag
acagatgaccagtctgatgagactgaggaggtgctttactgggtcaacttcttcttcatc
gtggtcttcactggcgagtttttactaaagatcttctcactgcgtcagtactacttcacc
aacggctggaacatctttgatgtggtggtggtcatcctttcaatcgtgggaatgtttctg
gctgacctgattgagaagtacttcgtgtcaccaacactcttcagggtgattcgtctcgcc
cgtatcggcagaatcctgcgtctcatcaagtcggccaaaggaatcagaactttactgttt
gccctgatgatgtcacttcctgccttgttcaacattggcctactacttttcctggttatg
ttcattttctccatctttggcatgtccaactttggctatgtgagacacggggctggaatc
gacgacatgtacaactttgagaccttcggcaacagcatgattatcctgtttatgatcacc
acgtctgctggctgggacggtctaatgctgcccattctcaactaccctccagactgcgac
ccgttgctggagaacagtggcaccccaaaccagggagactgcggaaacccttctgtgggc
atcttcttctttgttatgtacatcatcatctcttttcttattgtggtcaacatgtacatc
gccatcatcctggagaacttcagtgtggccacggaggagagtgccgacccgctcagcgag
gacgactttgcgaccttttatgagatttgggagaagtttgacctcgatgcctgccagttc
atcacctattccaagctttctgactttgctgatgcacttgaacaccccctccgagtcccc
aagcccaacaccattgaactgatcgccatggacatgcctatggtgagtggtgaccgcatc
cactgcctggacatcctgtttgccttcactaagcgtgtgctgggagacagtggagagctg
gacatgctgaggcaacaaatggaggagcgttttgtggcagccaatccatccaaggtctct
tatgagcctatcaccaccactctgaggcgcaagcaggaggaagtgtcagccagaatcatt
caaaggtccttccgtgcctacctggccaggaagggatttgtctttaagcgcaaacgagtc
aataacaaagtagagaacggcggtaacgataaggaaccggaaaagaaggagggcactccc
tcgactgcatccctgccatcttatgacagtgtaaccaaacctggcaaggagaagcaggat
gacaacaatgagggcaagggagggaagaaagagaaaggaagaaaccaaaaagacatcagg
gaatctaaatgttag
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