Ammodytes marinus (lesser sand-eel): 307250237
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Entry
307250237 CDS
T12006
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm02010
ABC transporters
ammm04145
Phagocytosis
ammm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
307250237 (cftr)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
307250237 (cftr)
09144 Cellular community - eukaryotes
04530 Tight junction
307250237 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ammm02000
]
307250237 (cftr)
Enzymes [BR:
ammm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
307250237 (cftr)
Transporters [BR:
ammm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
307250237 (cftr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
DUF87
RsgA_GTPase
SMC_N
AAA_29
AAA_16
AAA_22
nSTAND_NTPase5
T2SSE
MMR_HSR1
nSTAND3
FtsK_SpoIIIE
Zeta_toxin
nSTAND1
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
307250237
NCBI-ProteinID:
XP_079883389
LinkDB
All DBs
Position
5:complement(<4647183..4712519)
Genome browser
AA seq
1511 aa
AA seq
DB search
MQKSPVEDANFFSKYFFCWTSPLLRKGFRKKLELTDVYKAPSFDLADNLSERLEREWDRE
VVSAKKQPKLLRALARCFIGPFAFFGFLLYLGEASKTVQPQLLGRIIASFDPFHAPERDQ
GYFLALGLCLLFTARFLLLQPALFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGE
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLLWELIEVNGFCALATLTLLGIIQAW
LSQKMGPHRAKRSAMINRRLALTSEIVENIHSVKAYGWEDVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIVSAIVPLALSKGVILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVKKIEEFLMKEEYRVLDYNLTTTDLEMVNVSASWDEGIGELFEKIRQENKAN
GHLNGDAGLFFTNLYVTPVLKNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTSWIMPGTIRDNILFGLTYDEYRYTSVIKACQLEEDFALLPDKDKTLL
IEGGVTLSGGQRARLGMARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCVCKLMASKTRI
VVTSKLEHLKRADKILLLHNGDCYFYGTFSELQAQRPDFSSLLLGMEAYDNINAERRSSI
LTETLRRVSIDETAGFRGPETIRQSFRQPPPPIIVNGSTQGHPGNEGYPEKRKQSLILSP
LAAARKFSFIGNSQQTNGNNNTQSEDGARDVSERKFSVVPEDEQVEEVLPRGNMSYHGLQ
HLNGQRRQSVLAFITNSQGQERREQMQSSFRRKLSLAPQCDLGSELDIYARRLSKDSVYD
ITEEVDEEDMEQCFADERENIFETTSWSTYLRYITTNKSLVYVLIFIVIVFMLEIGGSVV
GIFLITDKIWTDSANPNSPNFIDDQHPNTSSPPVHLAVIVTPTSAYYIIYIYVATSESVL
ALGFFRGLPLVHTLLTVSKRLHEQMLSAVLRAPMAILNTMKTGRIMNRFTKDMATIDDML
PLVLFDLIQLTLIVTGAIFTVSIIRPYIFIAAIPLAVIFAILRKYFLRTGQQLKLLEAEA
RSPIFSHLIISLKGLWTIRAFGRQSYFETLFHKSLNTHTATWFHYLATLRWFLFRCDMIF
VLFFTAAAFIAVGTNQDKPGEVGIIVALAMLILGTFQWAVITSITVDGLMRSVDRVFKFI
DLPSEEPLPGGGKGGTDLIIDNPHAQDIWPNRGHMDVKGLTVKYTSAGRSVLSDISFSVD
GGHSMGLLGRTGSGKSTLLSALLRLADTDGDISIDGVSWSSVPLHTWRKAFGVVPQKVFI
LTGTFRMNLDPHGRHSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDRGNVLSNGHKQLLC
LARSILSKARILLLDEPSSYLDPITLQVLRKTLKQAFSDCTVILSEHRVEALLECQSFMM
IEGSSVKNYDTIQKLLNETSHLKQAMSPAERSRLFPQLHRLNSSKRPNATQPVKISSLPE
EAEDDVHDTRL
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcaccagtggaagatgcaaacttcttctccaaatatttcttctgttggacg
tccccgctgctgaggaaaggcttcaggaagaagttggagctgacagacgtgtataaagct
ccttcctttgacctggcagacaacctctcagagagactagaacgagaatgggacagggag
gtggtgtcggccaagaagcagcccaagctactgagagcgctggcacgatgcttcatagga
cccttcgccttctttgggttcctgctctacttaggggaggcctccaagacggttcagcct
cagcttctcgggcgcatcatcgcatcgtttgacccgttccatgcaccggagcgggaccag
ggttacttcctggctttaggtctctgtctgctcttcactgcacggttcctcctgctgcag
ccggccctcttcggactgcaccatctgggcatgcagatacgcattgccctgttcagcctc
atatacaagaagaccctgaagctgtccagccgagtgttggataagatcagtaccggggag
ctggtcagtctcatgtccgcccatctcaacaaactggacgagagcctgggtctggcccac
tttgtgtggatcacgcccctgcagtgcatcctgtgtgtgggtctgctgtgggagctgatc
gaggtgaatggattctgtgccctggctactctcactctgctgggcatcatacaggcctgg
ctgtcccagaagatgggcccgcaccgagcaaagcgcagcgcgatgataaaccggcggctg
gctctgacctcggagatcgtagagaacattcactctgtgaaggcgtacggctgggaggac
gtcatggagaccatcatcaagaacatcaggcaggacgagatgacgctgacgagaaagatc
ggttccctgcgttacttctacagcgcttcctatttcttctcggccatcctggtcatcgtg
tcggccattgttcctctggcgctcagtaaaggagttatcctgcgccgtattttcaccacc
gcgagctactgcatggtgctgagaatgaccctcacacggcagctaccggggtccattcag
atgtggtacgatacgctggcactggtcaagaagatagaggaattcttaatgaaggaggaa
tacagagttctggattacaacctgacgaccacggacctcgagatggtcaacgtgtcggca
tcctgggacgagggcattggtgagctgtttgagaagatcaggcaggagaacaaagctaac
ggccacctgaacggagacgcgggtttgttcttcaccaacctgtacgtcacgcccgtcctc
aaaaacatcagcctctacctggagaaggggaagatgctggcagtggctgggtccactggc
tctgggaagagttccctgctgatgatgatcctgggagagctggttccatcggagggaaag
atcagacacagcgggcgcatctccttctcccctcagacgtcctggataatgcccgggacc
atccgggacaacatcctgtttggtctgacctacgacgagtatcgctacacctctgtcatc
aaggcctgtcagctggaagaggactttgcgttgctgccggacaaagacaagacgctgctg
atcgagggaggggtcactctgagcggagggcagagggctcgactcggcatggccagggcc
gtgtataaggatgcggacctgtacctgcttgatgcacctttcacccacctggacatcgtg
acggagaaagagatctttgagaaatgcgtgtgtaaactgatggcctctaagacgcgcatc
gttgtcaccagcaaacttgagcatctgaaacgggccgataaaatcctgctgcttcacaac
ggagactgttacttctacgggaccttctccgagctccaagcccaacggcccgacttcagc
tcccttctgctgggcatggaggcttacgacaacatcaacgcagaacgacggagctccata
ctcaccgagaccctgcgtagagtgtctatagacgagaccgccggcttccgagggcccgaa
actatccgccagtccttccgccagccccctccccctattatagtcaacggttcgacccaa
gggcatccggggaacgaaggatatccggaaaaacgcaagcaatcgctaattctgagtcca
ctggcggccgctcgcaagttttctttcatagggaattcgcagcagacaaacgggaacaac
aacactcagtcggaggatggggcgcgggacgtctcggagaggaagttctcggtagttcca
gaggacgagcaggtcgaagaggtgttaccgcgcggcaacatgtcctaccacgggctgcag
catctcaacgggcagcgcaggcagtctgtcctggcctttatcaccaactcacaggggcag
gagcgcagggagcagatgcagtcttccttcaggagaaagctttccctcgctccgcagtgc
gacctgggctcagagctcgacatctacgcacgccgcctgtccaaagacagcgtgtacgac
atcacagaggaggtggatgaagaggacatggagcaatgctttgcagatgagcgcgagaac
atctttgagacgacctcctggagcacgtacctccgctacatcaccaccaacaagagcctc
gtctacgtgctcatattcatcgttatagtcttcatgctcgagatcggtggctcagtcgtt
ggcattttcctcattactgataagatctggacggacagcgctaacccgaactcgcccaac
ttcatagacgaccagcatcccaacacctccagcccccccgtccacctggccgttatcgtc
acgccaaccagcgcttattacatcatatacatctacgtggcgacatcggagagcgttctg
gccctgggattcttcaggggtctgccgttagtgcacacgctactgaccgtgtcaaaacgg
cttcacgaacagatgctaagcgccgtgctacgagcgccaatggctattctcaacactatg
aagacaggtcggatcatgaacagattcacgaaggacatggccaccatagacgacatgctt
cctctggtgctgtttgatctcatacagttgactctgatagtaacgggggccatctttact
gtgtccatcatacgaccgtacatctttatcgctgcgatcccattggccgtcatcttcgct
atcctcaggaagtacttcctacgcaccggacagcaactcaagctgctggaggctgaagct
cgcagcccaatcttctcccacctgatcatctcactgaagggcttgtggaccattcgggcg
ttcggacgtcagtcgtacttcgagactctgttccacaaatctctgaacacacacacagcg
acatggttccattacctagcaacgctccgatggttcctgttcagatgtgacatgatattc
gtactgttcttcaccgcggccgccttcatcgccgtgggaaccaaccaggataaaccgggg
gaggttggcatcatagttgccttggcgatgctgatcctgggaacgttccaatgggccgtc
atcaccagcatcactgtagacggactgatgcgttcagtggatcgagtgtttaagtttata
gacctgccgtcagaggagcctctcccaggtggaggtaaaggcggtaccgacctgatcata
gataaccctcatgcccaggacatctggcccaaccgcgggcacatggacgtcaaggggctg
accgtcaaatacacctccgccggccgctctgtgctcagcgatatctcattctctgtggac
ggagggcacagcatgggtctcctgggcaggacgggctcgggtaagagcacgctgctctct
gctctgctgcgtctggccgacacagacggagacatctccatagacggggtctcctggagc
tctgtgcccctgcacacctggaggaaggccttcggggtcgtgccacagaaagttttcatt
ctgacgggaacgttccgcatgaacctggatccacacggtcgccatagtgacgaggagctg
tggagggtcgcagaggaggttggtctgaagtcggtgatcgagcagttccctgataagcta
gacttccagctggaggacagagggaacgtgttgagcaacggccacaagcagctgctgtgt
ctggcccggtccatactcagcaaggcccgaatactactgctggatgaaccctcctcttac
ctggacccaataacgttacaggtcctgaggaagacgttgaaacaggcgttctcagattgc
accgtcatcctgtcagagcacagagtggaggcgctgctcgagtgtcagtcgttcatgatg
atcgagggcagctccgtaaagaactacgatacaatccagaagctgctgaatgagacgagc
cacctgaagcaggccatgagcccggcggagagatcgcgtctcttcccccagctgcaccgc
ctcaactccagcaagagacccaacgcaacccagcccgtcaagatctcatctctaccggag
gaggcagaggatgacgtgcatgataccaggctttaa
DBGET
integrated database retrieval system
