Ammodytes marinus (lesser sand-eel): 307250661
Help
Entry
307250661 CDS
T12006
Symbol
LOC307250661
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform 1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307250661 (LOC307250661)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ammm04131
]
307250661 (LOC307250661)
Membrane trafficking [BR:
ammm04131
]
Exocytosis
Others
Others
307250661 (LOC307250661)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
307250661 (LOC307250661)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
Rod_CreS
RBD-FIP
CCDC192
CCDC18_1st
DUF5798
Motif
Other DBs
NCBI-GeneID:
307250661
NCBI-ProteinID:
XP_079883922
LinkDB
All DBs
Position
5:22427668..22451795
Genome browser
AA seq
1109 aa
AA seq
DB search
MYGSARSVGRGDANQSGGRDGSGTGSQGSGRSPRLPRSPRMGHRRTNSTGGSGGGPGGAG
GKTLSMENIQSLNAAYATSPMYLSDNEVAMPGDHIPKSGVTVPTMGRQRVTYGSRGSSGG
VVAASTPNISSLGPGNAMLPAGMMAGDALAFGDHHMASTVPHSLRQARDNTILDLQAQLK
EVLRENEMLRRDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVIQ
DEAQHLQMTVQALQDELRIQRDLNQLLQQDPASQSRDLALTSEPTEENYRRLHAEHERQA
KELFLLRKTLEEMELRIDTQKQTMGARDESIKKLLEMLQSKGPSAKASDEDQERTRRLAD
AEMHRHHLESLLDQRDREITALREELYRRYEGTPESTKTKALQTVIDMKDAKINSMDRSL
RDMEEELLMLKSNGLLSCEERQEEMKQMEVYRSHTKFMKNKMEQVKQDLSRRDSELLGLR
TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKKSKQIQ
EVSEEKGTLNGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSNLKDRVKSLQA
DTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEELDCNKKELKELKERLSLLQG
DLSDRETSLLDLKEHASSLASSGLKKDSKLKSMEINLEQKKEECLKLENHLKRAQNATLE
AKANTELAERIKNLEQDVARHKEDSGKAQAEVDRLLEILREMENEKNDKDKKINELERNM
KDQSKKVASLKHKEQVEKSRNARLVEEARKREDNMSESSQQVKDTLRQKSDRIEELEEAL
RESVQITAEREMVLAQEESARSHQERQMEELLGAMEKVKQELESMRAKLASTQQSLGEKE
AHLSTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVALLKREK
DRLVQQLKQQTQNRMKLMADNYEDDHLKTAPDQTNHKPSPDQMIPPLLALSQNRSKLKLY
IAHLTDLCHDRDPSILSQLTPPAHYHHSDPEDWEEELQKMSVEQLERELEVCEKESGELQ
EYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagtgcccgctctgttggcagaggggatgccaaccaaagtggcggtagagat
ggaagtggcactggtagccagggatctggccgctcccctcgccttccccgctcccctcgg
atgggacaccgtcgcaccaacagcaccggtggcagtggagggggtcctggaggagcagga
ggcaagacactgtccatggagaacattcagtctctcaacgctgcctatgccacctcaccc
atgtacctgagtgacaatgaggtcgccatgccaggggaccacattcccaaaagtggtgtg
acggtgccgaccatggggagacagagggtgacgtatgggtcgaggggcagcagtggtgga
gttgtggccgctagcacccccaacatctcctccttagggcctggcaatgctatgctgcca
gctggcatgatggcaggtgatgctctagcttttggggaccaccacatggcgtccactgtg
ccccattctctgaggcaggcccgagacaacaccatacttgacctgcaggcccaactgaaa
gaggttttgcgtgagaatgagatgctgcgacgagatgtggaagtcaaggagagcaagctc
agttcctccatgaattccatcaagactttctggagcccggaattaaaaaaggagcgagct
ctcaggaaagatgaagtttctaagatcactgtctggaaggaacaataccgtgtgatccaa
gatgaagcacagcatctccagatgaccgttcaggcacttcaggatgagctgaggatccag
agggatctgaaccagctgctacagcaggacccggccagccaaagccgggacctggccctg
acctctgaacccacggaggagaactaccgaaggctccacgccgagcacgagaggcaggcc
aaagaactcttcctcctcaggaagaccctggaggagatggagctgaggatcgacacgcag
aagcaaaccatgggagccagggacgagtccatcaagaaactcctggagatgctgcagagc
aaagggccgtctgccaaggcatcagacgaggatcaggagagaaccaggagactggctgat
gcagagatgcacaggcatcatcttgagagcttattagaccagagagacagagagattact
gcattaagagaggagctgtaccgtcgttatgagggaaccccagagtcaaccaaaactaag
gctctgcagaccgttatagacatgaaggatgccaaaataaattcaatggaccggagcctg
cgagacatggaagaggagctgctaatgttgaaatccaatggacttctcagctgcgaggag
cgtcaggaggagatgaagcagatggaggtctaccgcagtcacaccaagttcatgaagaac
aagatggagcaggtgaagcaggacctctccaggagggacagtgagttgcttggtttgcgg
accaagctggagacgctcaccaaccagttctcagacagcaagcagcacattgaagtcctc
aaggagtccctcacagccaaggagcagcgagcggccatcttacagacagaggtggatgcc
ttgcgtctgcgcttggaagagaaggagacgactctcaacaagaagagcaagcagatccaa
gaagtgtccgaagagaagggcacgctcaacggggagatccacgacctcaaagacatgctg
gatgtcaaggagcgcaaagtcaacgtgctacagaagaagattgagaacctgcaggagcag
ctgagggacaaggagaagcagatgagcaacctgaaggacagagtcaagtctctgcaggcg
gacacctccaacacggacactgctctcaccacactggaagagtctcttgcagaaaaggag
cgcatcattgagcgtctaaaggagcagcgagaccgagacgaccgcgagaagacggaggag
ctcgactgtaacaagaaagaactgaaagagttgaaggagagactgagcctactgcaggga
gacctgtcagacagagagacctctctgttggacctgaaggagcatgcatcatccctggcc
tcatcggggctgaagaaggactccaagctcaagagcatggagatcaatttggagcagaag
aaggaggagtgcctcaaactggagaaccatcttaagagagctcaaaatgcaaccctggag
gctaaggccaacacagagctggccgagcgcattaagaacctggagcaggacgtggcccgc
cacaaagaggattctgggaaggcccaggctgaggtggaccgtctgctggagatcctgcgg
gaaatggagaatgagaagaatgacaaagacaagaagatcaatgagctggagaggaatatg
aaggaccagtcaaagaaggtggcgtctctcaagcacaaggagcaggtggagaagagcagg
aacgctcgactggtggaggaggccaggaagagggaggacaacatgtctgaaagctcccag
caggtcaaggacacactgcgtcagaagtctgatcgcatagaggagctggaggaggcgctg
agagagagcgttcagatcactgctgagcgagagatggtactggcacaggaggaatctgcc
aggtcccaccaagagagacagatggaggagctgctgggtgctatggagaaggtgaagcag
gagctggagtccatgagggccaagctggcttcaacccagcagtctcttggtgagaaagag
gcccacctctcaaccttacgagccgagcgcaggaaacacttggaggaggtgctggagatg
aagcaggaggcactgttggccgctatcagtgagaaggatgccaacattgccctgctggag
ctgtcctcctctaagaagaagaagacccaggatgaggtggctctgctcaagcgggagaag
gaccgactggtgcaacagctcaaacagcagactcaaaaccgaatgaaactgatggcagac
aactacgaggatgaccatctgaagactgcccctgaccagacaaatcacaagccctctcca
gatcagatgataccccctctgttagccctgtcccagaaccgcagtaagctcaagctttac
attgcccacctgacagacctgtgccatgaccgggaccccagcatcctcagccagctcaca
ccgcccgctcactatcaccatagcgaccctgaagactgggaggaggagctccagaagatg
agcgtggaacagttggagcgggagctggaggtgtgtgagaaggagagcggggagctgcag
gagtacgctaactctgtcctgcagcagatcgcagactactgccccgatatcctggaacag
gtcgtcaacgccctggaagagtcatgctga
DBGET
integrated database retrieval system
