Ammodytes marinus (lesser sand-eel): 307252729 Help Entry 307252729         CDS       T12006                                  Symbol col2a1a Name (RefSeq) collagen, type II, alpha 1a   KO K19719   collagen type II alpha Organism ammm  Ammodytes marinus (lesser sand-eel) Pathway ammm04510   Focal adhesion ammm04512   ECM-receptor interaction ammm04518   Integrin signaling Brite KEGG Orthology (KO) [BR:ammm00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     307252729 (col2a1a)    04518 Integrin signaling     307252729 (col2a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     307252729 (col2a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ammm00536]     307252729 (col2a1a) Glycosaminoglycan binding proteins [BR:ammm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    307252729 (col2a1a) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Frataxin_Cyay Motif Other DBs NCBI-GeneID:  307252729 NCBI-ProteinID:  XP_079886614 LinkDB All DBs Position 7:<19198271..>19219267 Genome browser AA seq 1482 aa AA seqDB search MFGFVDSRTVLLLVASQVVLLSVVRCQEEDDQEAGGCIQDGQLYNDKDVWKPEPCRICVC DSGAVLCDEIICEEIKECANPIFPSGECCPICPAEPVPPLVGQKGEPGDIADVVGPKGPP GPMGPSGEQGQRGVAGAKGDTGNIGPRGRDGEPGTPGNPGPAGPPGPAGLGGNFAAQMAG GFDEKSGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGSAGEAGEPGPAGALGPRGPP GPSGKPGSDGDAGKPGKAGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKGENGAA GAKGETGTAGENGAPGPMGARGLPGERGRPGAAGSAGARGNDGLPGPAGPPGPVGPSGAP GFPGSPGSKGEAGPTGARGSEGQQGPRGEAGTPGSPGPAGASGNPGTDGIPGSKGSAGGA GIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGVPGFKGEAGPKGELGPAGLQGAPGPA GEEGKRGARGEPGSAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVPGAAGPKGAG GDPGRTGESGLPGARGLTGRPGDAGAQGKGGPSGAAGDDGRPGPPGPQGARGQPGVMGFP GPKGANGEAGKAGEKGLLGRPGLRGLSGKDGETGSSGPPGPAGPAGERGEQGQPGPNGFQ GLPGPSGSPGEAGKPGDQGVPGEGGAPGAVGARGERGFPGERGGAGAQGLQGPRGLPGTP GTDGPKGAIGPNGAAGSQGPPGLQGMPGERGNGGIPGAKGDRGDNGAKGPEGASGKDGGR GLTGPIGPPGPSGPNGAKGETGPSGPTGASGARGAPGDRGEGGPPGPAGFAGPPGADGQP GAKGELGEGGQKGEGGAPGPQGPSGAPGPVGPTGVSGLKGARGAQGAPGATGFPGAAGRV GSPGPNGNPGAAGPAGGSGKDGPKGARGDGGSPGRQGDAGLRGPAGTSGEKGEAGEDGPP GADGPSGPMGLGGSRGIVGLPGQRGERGFAGLPGPSGEPGKQGSPGSAGDRGPPGPVGPP GLTGPSGETGREGTPGSDGPPGRDGSAGVKGERGNTGPGGAPGLSGAPGAPGPVGPLGKQ GDRGESGAQGPAGPSGPAGARGMAGPQGPRGDKGEAGETGERGQKGHRGFTGLQGLPGPP GSAGDSGASGPAGPSGAKGPPGPTGPAGKDGSNGMLGPIGPPGPRGRSGESGPAGPPGNS GPPGPPGPPGPGIDMSAFAGLGQTEKSTDPLRYMRADEASSSLRQHDVEVDSTLKSLNNQ IENLRSPDGSQKNPARTCRDLKLCHPEWKSGNYWVDPNMGSTADAMKVFCNMESGETCVY PSIAKVPQKNWWTSKSKERKHIWFGETMNGGFHFDYAQEGPAAIAASVQLTFLRLLSTEA SQNLTYHCKNSIAYMDQATGNLKKALLLQGSNDVEIRAEGNSRFTYSVLEDGCKKHTDRW GKTVFEYKTQKTSRLPIVDIAPMDIGGADQEFGVDVGAVCFL NT seq 4449 nt NT seq  +upstreamnt  +downstreamnt atgtttggctttgtggattcaaggactgttctgctacttgtagcatcccaggttgtttta ctatccgtggtcagatgtcaggaagaggacgaccaggaggcaggtggctgcatccaggac ggccagctgtataatgataaggatgtgtggaagcccgagccgtgtcgtatctgtgtgtgt gacagcggagcggttctgtgcgatgagataatctgcgaggagatcaaagagtgtgccaac cctatcttcccatctggagagtgctgtcccatctgccctgctgagccagtgcccccattg gttggccagaaaggtgaaccaggagatattgctgatgttgttggaccaaaaggaccaccc ggacctatgggcccctcaggtgagcagggacaacgcggagtagctggcgctaagggtgat acgggaaatattggacctcgtggtagagatggtgagcccggcacacccggaaaccccgga cccgccggcccacctggaccagcagggcttggaggaaactttgctgctcagatggccgga ggttttgatgagaagtctggaggcgctcagatgggtgtgatgcaagggccaatgggtcct atgggtccccgtggtccccctggaccttctggagctcctgggccacagggtttccaaggt tccgctggtgaggctggagagcctggacctgctggagcactgggacctcgtggaccacct ggaccttctggaaaacctggaagtgatggtgatgctggtaaacctggaaaagctggtgag cgtggacctgcagggcctcagggagctcgtggattccctggaactcctggacttcctgga atcaaaggacacagaggtcatcctggtctggatggagctaagggagaaaatggtgctgca ggagccaagggcgagaccggtactgctggagagaatggcgcaccagggcccatgggtgca cgtggtttgcccggtgagagaggacgtcccggagctgctggatctgcaggtgcccgtggt aatgatggcttgcctggtcccgctggtccccctgggcccgttggtccttctggagcaccc ggtttcccaggatctccaggatctaagggagaagctggtcccacaggagcccgcggatct gaaggacaacagggaccccgcggagaggccggcacaccaggatcccctggacccgccgga gcatcgggtaaccccggaactgatggtatccctggatctaaaggatctgctggtggtgct ggtattgctggcgctcctggtttccccggcccccgtggcccacccggaccacagggagct actggacctctggggccaaagggacagtctggagaccccggtgttcccggattcaaaggt gaagctggacccaagggagagcttggccccgctggtcttcaaggtgcccccggcccggct ggagaagaaggaaagagaggagccagaggagagcctgggtctgctggaccacttggacct cccggagagagaggagctcctggtaaccgtggtttcccaggtcaggatggtcttgctggt gctaagggtgcccctggtgaccgtggcgttcccggtgctgctgggcctaaaggtgctggt ggagaccccggacgcacaggagagtctggtctccccggagcaagaggtcttactggtcgt cccggagatgctggtgctcaaggcaaaggtggaccttctggtgccgctggtgatgacggt cgccccggcccacctggccctcagggagcccgtggacagcctggagtgatgggattcccc ggaccaaagggagccaatggtgaagctggaaaggcaggagagaagggtcttttgggtcgt cctggtctgagaggtctgtctggaaaagatggtgagactggatcttctggacctcccggc cctgctggacctgctggagagagaggagagcaaggacagcccggacctaatggcttccag ggtctccctggaccatctggttcccccggagaagctggcaaacctggagaccagggtgtt cctggagagggtggagctcccggtgctgttggagctagaggtgaacgtggtttccctgga gagagaggaggtgctggagctcagggtctgcagggacctcgtggactccctggcacacct ggaactgatggacccaagggagcgattggacccaatggtgctgctggatcccaaggaccc cccggcctgcagggaatgcccggagagagaggaaatggtggcatcccaggagctaaggga gacagaggtgacaatggagccaagggacctgagggagcttctggaaaggacggtggcaga ggtttgactggtcccattggtcctcctggcccatctggacccaacggcgccaagggtgaa actggaccttctggcccaactggtgcttccggtgcccgtggtgcccctggtgaccgtggt gagggcggacctcctggacctgctggttttgctggacctcctggtgcagatggtcagcct ggtgctaagggagagcttggagagggtggacagaagggagaaggtggtgctcctggccct cagggaccttctggggctcctggacctgtgggaccaactggtgtatctggacttaaagga gcccgtggtgctcagggagctcctggtgctactggtttccctggtgctgcaggcagagtt ggatctcccgggcctaatggaaaccccggtgctgctggccctgctggtggaagtggtaag gacggacccaagggtgctcgcggtgacggtggatccccaggtagacagggagacgctggg ctccgcggaccagcaggtacatcgggagagaagggagaggctggagaggatggaccacct ggtgctgatggtccttcaggtcctatgggtcttggtggatctcgtggtattgttggtttg ccaggtcagcgcggagagagaggattcgctggtctccccggaccttctggtgaacctggt aaacaaggatctcccggctctgctggagaccgtggaccccctggacccgtcggacctccc ggactcactggaccttctggagagactggacgcgagggaacccctggatcagatggacct cctggtagagatggatctgctggagtcaagggagagcgaggaaacaccggtcctggtggt gcccccggattatctggagcccctggtgcccccggacccgtcggacccctcggcaagcag ggagacagaggagagtctggtgctcaaggacctgcaggaccttcaggacccgctggcgct agaggaatggctggaccccaaggaccacgtggagacaagggagaggctggtgagaccgga gagaggggacagaagggacaccgtggcttcaccggtctgcagggtcttcctggacctccc ggttccgctggagactctggagcttccggacctgctggacccagcggtgcaaagggacca cctggcccaaccggacctgctggaaaagatggatcaaatggaatgctcggccccatcgga ccccctggacctcgtggtcgttctggagaatctggtcctgctggtcctcctggtaactcc ggaccccctggccctcctggtccccctggccctggcatcgacatgtctgccttcgccggt ctgggtcagactgagaaatccaccgatccactcaggtacatgagggctgatgaggcctcc agctccctgaggcagcacgacgtggaggtggactccacactcaagtcccttaacaaccag atcgagaacctgcgcagccccgacggcagccagaagaaccccgctcgcacctgcagagac ctgaaactgtgccaccccgaatggaagagcggcaactactgggtggatcccaacatgggc agcacagctgatgccatgaaggtgttctgtaacatggagagcggagagacctgcgtctac cccagcattgccaaggtaccacagaagaactggtggaccagcaagagcaaggagcgcaaa cacatctggttcggagagaccatgaacggaggattccacttcgactatgctcaggaaggc cccgccgccattgctgccagtgtccagctgaccttcttgaggcttctgtccactgaggca tcccagaacctcacctaccactgcaagaacagcattgcctacatggaccaggcaacgggc aacctgaagaaggctttgctgctgcagggctccaacgatgtggagatccgtgcagagggc aacagtcgcttcacatacagtgtgttggaggatggctgcaagaaacatacagaccgatgg ggcaagactgtcttcgagtacaaaacacagaaaacctcccgtctgccaatcgtggacatt gctcctatggacatcggaggagcggatcaggagttcggagtggatgtaggcgccgtctgc ttcttgtaa

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