Ammodytes marinus (lesser sand-eel): 307252741
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Entry
307252741 CDS
T12006
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform 1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
307252741 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ammm04040
]
307252741 (scn8aa)
Ion channels [BR:
ammm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
307252741 (scn8aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
HpsJ
FraC
Motif
Other DBs
NCBI-GeneID:
307252741
NCBI-ProteinID:
XP_079886631
LinkDB
All DBs
Position
7:<11425900..>11468134
Genome browser
AA seq
1985 aa
AA seq
DB search
MAAALLPPGPDSFRYFTSESLATLEQRINEEKNKKPPKQDSSYRDDDDDNKPKPNRDLET
GKSLPYIYGDIPKGMVATPLEDLDPFYRNTQKTFIVLNRGKTIFRFSANPALYFISPFNL
LRRIAIKILIHSYPFKCCLNCKDKVFFFTMIIMCTILTNCIFMTFSDPPEWSKQVEYTFT
GIYTFESLVKICARGFCIDGFTFLRDPWNWLDFMVISMAYITEFVNLGNVSALRTFRVLR
ALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVVWPI
NITEPHLPNGSKGFDWNEYIMNDTNFYFLPGQLDALLCGNSSDSGRCPEGFTCMKAGRNP
NYGYTSFDSFGWAFLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLI
LAVVAMAYEEQNQATMEEALQKEEEFKAMLEQLKRNQEDAQAAAMATSAGTCSEDAVEDD
EGGRLSCSSSEMSKLSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGIKKSRFR
FPDNRLGRKSSIMNQSLLSIPGSPFLSRHNSKSSIFSFKGRGKDSENEFADDEHSTVEEF
EERRGSLFSPYRRNSYSGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAADDSPTT
EVEVKKKLSGSLMVSVDQLNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFAN
TFLIWNCFPGWLKIKETMNMIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFEEVLSVG
NLVFTGIFAGEMFFKLMAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLALIVFIFAVVGMQLFGKSYKDCVCKI
ALDCELPRWHMNDFFHSFLMVFRVLCGEWIETMWDCMEVAGQGMCLLVFMMVMVIGNLVV
LNLFLALLLSSFSADNLAATDDDGELNNLQISVIRIKKGIAWFKANMRIVMASLLKKPLM
EDEQKPLDDMYDKKLNCIANHSGVDINRDLDYVKNGNGTTSGIGSSIGKYLIDEDHMSFI
HNPNLTVCVPIAVGESDFENLNTEDFSSESENENSKEVSERSTCILLDDTSSSEGSTIDI
KPDVEEVVVVEAVEEYLDPDACWTDGCVAKYPCCDVSITMGWGKPWWFLRKTCYLIVEHN
WFETLIIFMILLSSGALAFEDVYIEQRKTIRFILEYADRVFTYIFILEMLLKWVAYGFVK
YFTNAWCWLDFFIVDVSIVSLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVN
ALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNQTAEEYFPVDVVNNKTQCEA
LISQNFTEVRWKNVKINFDNVGAGYLALLQIATFKGWMDIMYAAVDSRNVEDQPDYEVNI
YMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSK
KPQKPIPRPQNMIQGMVFDFVTQQVFDISIMILICLNMVTMMVETDDQSDEAEGVLYWVN
FIFIVVFTTEFLLKLFALRHYYFANGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRV
IRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKH
GAGIDDLYNFETFGNSMIILFMITTSGGWDGLLLPILNYPPDCDPTWENPGTNVKGDCGN
PSVGIFFFVMYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPT
ASQFITFTKLTDFADTLEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGD
SGELDMLRQQMEERFVAANPSKVSYEPITTTLRRKQEDVSSRIIQNAYRTHLIRRGIIFR
RHLFRNNKLENGGTNQEKESTPSTASLPSYDSVTKPDKEKRDENKEEWARKDKDKNQKDE
WESKC
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcccttcttccgccaggacctgatagcttcaggtatttcacttcggaatct
ttggcgacccttgagcagcgcatcaatgaggagaagaacaaaaagccacccaagcaggac
agtagctaccgcgacgatgacgacgacaacaagcccaagcccaacagagacttggagact
gggaagagcttgccctacatctacggggacatccctaaaggaatggtggcgacaccactg
gaggacctggacccattctaccggaatactcagaaaacatttatagtgctaaataggggg
aagaccatattccgttttagtgccaaccctgccttgtacttcataagtccttttaatctg
cttaggcgaatagctattaaaattttgatacattcatatcctttcaaatgctgtcttaac
tgcaaagacaaagttttttttttcaccatgatcattatgtgtactattttgaccaactgt
atattcatgacctttagtgatcctccggaatggtcaaaacaagtcgagtacacattcacg
gggatttacacatttgaatctcttgtaaaaatctgtgctcgaggattctgtatagacggg
tttacattccttagagatccatggaactggctggatttcatggtcatttcaatggcgtat
ataacagagtttgtaaacctaggcaatgtctcagctctgcgcacgttcagagtgttgagg
gcattgaaaactatttctgtaattccaggcctaaagaccattgtgggcgccctgatccag
tctgtgaagaagctttcagatgtgatgatcctgaccgtcttctgcctgagtgtctttgcc
ctgatcggcctccagctctttatgggcaacttgcgccaaaagtgtgtggtctggccaatc
aacatcactgagcctcacctgcccaacggcagcaagggctttgactggaatgagtacatc
atgaacgacactaatttctacttcctgcctggccagctggatgctcttctctgtgggaac
agctctgactctggccgctgcccggagggcttcacatgcatgaaagctgggaggaatccg
aactatggctacaccagctttgacagcttcggctgggccttcttggctctcttcagactc
atgacacaggacttctgggagaacctttacatgctgaccctgagggcggcagggaagacc
tacatgatcttctttgtgttggtgatctttgttggttcgttctacctggtgaatctgatc
ttggctgtggtggcaatggcctacgaggagcagaatcaggccaccatggaagaggctctg
cagaaggaggaggaattcaaggccatgctggagcaactcaagaggaatcaggaagatgcc
caggctgctgccatggcaacctcggcgggcacgtgttcagaggatgcggtagaggacgat
gagggagggcgtctgtcatgcagttcctccgagatgtccaagctcagctccaagagcgcc
aaagaacgacgcaatcgcaagaagaagtggcggcagaaagagcaggagaaagagaaaggc
gacagtgagaagtttgtgaagtccgagtcggacgacggcatcaagaagagccgcttccgc
ttccccgataatcgcctcggccgaaagtcttccattatgaaccagtccctcctcagtata
cccggctcgcctttcctgtcccgccacaacagcaagagcagcatcttcagtttcaagggc
cgcggtaaggactctgagaacgaatttgcagacgatgaacacagcacagtggaggagttt
gaggagcgccgggggtccctattcagcccataccggcggaacagctacagtggcttccac
gggaagaggaacagcacggtggattgcaacggcgtggtgtcgctcatcggccctgggccc
ggtggacgccttctgcctgaggtgaaaatagataaggcagctgacgacagtccgactact
gaggttgaggtgaagaagaagctgtctggctccctgatggtgtctgtggaccagctcaat
acctcctttgggcggaaagagcgggccaacagtgtcatgagcgtcattaccaacacacta
gtggaggaactggaggagtctcagcgcaagtgtccgccatgctggtataagtttgctaac
acattcctgatctggaactgcttccccggatggcttaagatcaaggagactatgaacatg
attgtcatggatcccttcgtggacttagccatcaccatctgtattgtcctcaacaccctc
ttcatggccatggagcactaccccatgaccccccactttgaggaagtgctgtctgtcggc
aatctggtgtttacggggatatttgcaggcgagatgtttttcaagctgatggctatggat
ccgtactactacttccaggaggcctggaactgtttcgatggtttcatcgtgacgctgagt
ttagtggagctggcactggctgacgtcgaaggcctctctgtcctgcggtcattccgattg
ctgagagtttttaagctggccaagtcatggcctaccctcaacatgctgatcaagatcatt
ggtaactctgtgggagccttgggaaacctgactctggtgttggccctcatcgtattcatc
tttgctgttgtgggcatgcagctgtttggcaagagctacaaagactgtgtgtgtaagatt
gctttagactgtgagcttccccgctggcacatgaatgacttcttccactccttcttgatg
gtcttccgggtgctgtgcggtgagtggatcgagaccatgtgggactgcatggaagtggcg
ggccagggcatgtgcctcctcgtcttcatgatggtcatggtcattggtaacctggtggtg
ttgaacctgttccttgccttgctgctgagctccttcagcgctgacaacttggctgcaaca
gatgacgacggcgagctcaacaacctgcagatttccgtcatacgcatcaagaaaggcatt
gcgtggtttaaagccaatatgcgcatagtgatggctagtctgctgaagaagccgctgatg
gaggatgagcagaaacctttggatgacatgtatgacaagaagctgaactgcatcgccaac
cactccggcgtggacatcaaccgggacctggactatgtaaagaatggtaacggcaccacc
agtggcattggcagcagcattggcaagtacttgatcgacgaggaccacatgtcgttcatc
cacaaccccaacctgaccgtctgcgtgccgatagccgttggagagtctgactttgagaac
ctcaacacggaggacttcagcagcgagtctgaaaatgagaacagcaaagaggtcagtgag
aggagcacatgtatattactggatgacaccagttcatcagagggcagtaccatcgacatc
aagccagatgtggaagaggtggtggtggtggaggcggtggaggaatacttggacccagat
gcgtgttggacagatggttgcgtggccaagtatccgtgttgtgatgttagcattactatg
ggctgggggaagccctggtggttcctgagaaaaacctgctacctgatcgtggaacacaac
tggttcgagaccctcatcatattcatgatcctcctcagcagtggtgccctggcctttgag
gatgtgtacattgagcagaggaagacaattcgcttcattttggagtacgccgacagggtc
ttcacctacatcttcatcctggagatgttgctgaaatgggttgcctatggttttgtcaag
tattttaccaatgcctggtgttggctggacttcttcattgtggatgtgtctatagtcagc
cttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcaggacacta
agggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtcaac
gccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttttgg
ctgattttcagtatcatgggggtcaacttgtttgcgggcaagtactactactgtttcaat
cagacagcagaggaatactttcctgtggacgtggtcaacaacaagacccagtgtgaggcc
ctcataagtcaaaacttcaccgaggtcaggtggaagaatgtcaagattaactttgacaat
gtgggcgcgggatacttggccctgttgcaaatagccacattcaaaggctggatggacatt
atgtacgctgctgtggattccagaaatgtggaagaccagcctgactatgaagtcaacatc
tacatgtacatctactttgtggttttcatcatatttggctccttcttcactctaaacctc
ttcattggtgtgatcattgacaacttcaaccagcagaagaaaaagtttggaggtcaggat
atcttcatgacagaggaacagaaaaagtactacaatgcgatgaaaaaattgggttccaaa
aagcctcaaaaacctattcctcgaccacagaacatgatccagggcatggtttttgacttt
gtgacacagcaagtctttgacatatccatcatgatactcatctgcctcaacatggtgacc
atgatggtggaaacagacgatcagtcagatgaagcggagggcgtcctctactgggttaac
ttcatcttcattgtagtcttcaccacagagttcctgttgaaactctttgcccttcgacac
tattacttcgcaaatggttggaatatctttgacgtggtggtggtcatcctttctattgtc
ggcatgttcttggctgacatcattgagaagtactttgtgtcaccaaccctgttcagggtg
atcaggttggctcgtattggccgtatcctccgtctgatcaaaggagctaagggcatcagg
actttactatttgctctgatgatgtcactgcctgccctgttcaacattggcctactgctc
ttccttgtcatgttcatcttctctatttttggcatgtctaactttggctatgtaaaacat
ggagcaggcattgacgacttgtacaactttgaaacctttggcaacagcatgatcatcctg
ttcatgatcaccacgtcgggtggctgggatggcttgctgctgccgatcctaaactaccca
ccggattgtgatcctacttgggagaaccctggtacaaacgtaaagggcgactgtggtaac
ccgtcagtgggcatattcttttttgtcatgtatatcatcatttctttcctgattgtggtc
aacatgtacattgccattatcttggagaacttcagtgtggccacagaggaaagtgcagat
cccctgagtgaggacgactttgagaccttctatgaaatctgggagaagtttgaccccact
gcttctcagttcattacttttaccaagctgactgactttgctgacacactggagcaccct
cttcgtgtgccaaaacccaacactatagaactaattgccatggacctgcccatggtgagc
ggcgatcgcattcactgcctggacattctgtttgccttcacgaagcgagtcctgggtgac
agtggtgagttggacatgctaaggcaacaaatggaggagcgttttgtggcagccaacccc
tccaaggtgtcttatgaacccatcaccaccactcttcgccgcaaacaggaggatgtgtct
tccagaattatccagaatgcttaccgtacccacctcataaggcgcggcatcattttccgg
cgacacctttttaggaacaataagctcgagaacggtgggacaaaccaagagaaggagagc
acaccatctacagcctctctcccctcttatgatagcgtgaccaaacctgacaaagagaag
cgggacgaaaacaaggaggagtgggccaggaaagacaaggacaaaaaccaaaaagatgaa
tgggaatcaaagtgttag
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