Ammodytes marinus (lesser sand-eel): 307252817
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Entry
307252817 CDS
T12006
Symbol
clstn1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
ammm Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules
307252817 (clstn1)
Cell adhesion molecules [BR:
ammm04515
]
Cadherins
Cadherin related
307252817 (clstn1)
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Other DBs
NCBI-GeneID:
307252817
NCBI-ProteinID:
XP_079886743
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Position
7:complement(9983963..10022886)
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AA seq
954 aa
AA seq
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MRFRGNKQFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAGEICGFRIHGQNVPFEAVVLDKSTGEGVIRTKEKLDCELQKEHTFTIQAYDC
GEGPDGENMKKSHKATVHIQVNDINEYAPVFKEKSYKATVIEGKKYDSILKVEAVDADCS
FQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKEHMYKLTVTAYDCGKNRASEDVLV
KISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRATIELETNHIGKG
CDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVFEFNGTQAIKV
PDGMVSTSLKEPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVHNCRLILLLRQ
DPSETENYKPAEFHWKLDQACDKEWHHYVLNVEFPTVSMFVDGTTFEPFLVTEDYPLHTS
KIETQLTIGACWQGGNARMAQFFRGNLAGLMIRTGKLENKKVIDCLYTCKEGLDVQLPEE
VASAVKVEFNPNQSSLTVEGDDINAFDKVMQHISYLNSRQFPTPGIRHLRISTTVKCFNE
EPCVTVPDAEGYVMVLQPEEPKISLSGIDHFARSAAEFESQEGVTLFPEMRIVSTITREV
EADTESEAAEGGDDDPTVQETVVSEEIMHNLDTCEVSVVGDELDGEHESLEVDMSQLQQH
GLEMSSSNLGLVVTGVNTMANYEQVLHLIRYKNWHTEALFDRKFKLVCSELNGRYISNDF
KVEVNVIHTANPVEQANNAMVQPNFINPVHHASVDLSGHNLVNAHQASVVPSAATIVIVV
CVSFLVFMIILGVFRIRASHQGTIRDTEGGKENEMDWDDSALTITVNPMETYEDQHSSEE
EEEEEEESEDGEEEDDITSAESESSEDEEAGEPEDQQAASRQQQLEWDDSTLTY
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaataaacaatttgcatccgcagtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataagcacaaaccatggatcgagacgacgtaccac
gggatcgtaacggaaaatgacgacaaagtgcttctggacccgcctctgattgctctggac
aaggatgctcctctacgctacgcaggtgagatttgcggcttcaggatccacgggcagaat
gtccccttcgaggctgtggtcctggacaagtccactggcgagggggtcatcaggaccaag
gaaaagctggactgtgagctgcagaaggagcacaccttcaccatccaagcttatgactgt
ggagaaggtcctgacggggaaaacatgaagaaatcccacaaggccactgtgcacatccag
gtgaacgacatcaacgagtatgccccggtgttcaaggagaagtcctacaaagccacggtc
atcgaggggaagaagtatgacagcatcctgaaggtggaggcagtggacgccgactgctct
ttccaatttagccagatctgcaattatgagatcgtcacccccgatgtgcccttcactgtc
gacaaagacggcttcatcaagaacacagagaaactgagctacggcaaagagcacatgtac
aagctgactgtgaccgcctacgactgtggaaagaatcgggcctccgaggacgttctggtc
aagatcagcgtcaagcctacctgcaaacccagctggcaaggcttcaataagaggattgaa
tacgaacctggcacaggcagcctggcccttttccccagcatgcacttggagacctgtgat
gagccaatcacgtccatccgagccactattgaactggaaaccaaccatattgggaagggc
tgcgaccgtgacacctactctgagaagtcgctgcacaagctgtgcggagccagctccggc
accgtggagcttctaccggcacccagcagctctgccaactggacggtagggctgcccacc
gataacgggcatgacagcgaccaggtctttgagttcaacggcacacaggccatcaaggtt
cccgatggcatggtgagcaccagcctgaaggagcccttcaccatctctgtgtggatgaga
catggccccggggcccatgagaaggagaccatcctctgcaactctgacaagacagaaatg
aacagacaccactactcactctacgtccacaactgccggctgatccttctccttcgccag
gatccctccgagactgagaattacaaaccagcagagtttcactggaagctggaccaggcc
tgtgacaaagagtggcatcactatgtgctgaatgtagagttccccaccgtgtccatgttt
gtggatggaaccacctttgagcccttcctggtaacagaggattacccactgcacacctcc
aagatcgaaactcaactcaccattggtgcctgctggcaaggcggaaatgctcggatggct
cagtttttccgtgggaacctcgcggggctgatgatccgcactggcaagctggagaacaag
aaggtgatcgactgtttgtacacctgcaaggagggactggacgtgcaactgcctgaggag
gtagcttcagctgtcaaggtggagttcaaccccaaccagtcctctctgaccgtggagggc
gacgacattaacgcctttgacaaggtcatgcagcacatctcctacttgaactctcgccag
ttccccacccctggcatcagacaccttcgcatctccaccaccgtcaaatgtttcaacgag
gagccctgcgtgacggtgcccgatgctgaaggctacgtgatggtgctgcagcccgaggag
cccaagatcagcctgagtggcatcgaccactttgcccgcagcgccgccgagttcgagagc
caggagggcgtgaccctgttccccgagatgcgcatcgtgagcaccatcacccgagaggtt
gaggccgataccgagtctgaggccgcagaagggggtgacgatgaccctacagtccaagag
acagtggtgtcagaagagatcatgcacaacctggacacatgtgaagtgagtgtggtggga
gacgagctggacggagagcacgagagtctggaggtggacatgagccagctgcagcagcat
ggcctggagatgagctcctctaacctgggcctcgtcgtcactggtgtgaacaccatggcc
aactatgagcaggtcctgcatctcatccgttacaagaactggcacaccgaggcgctcttc
gacaggaaattcaaactggtctgctctgaactcaacgggcgctacataagcaacgacttc
aaggtcgaggtgaatgtgatccatacagccaatcctgtggagcaagccaacaacgccatg
gtgcagcccaacttcattaaccctgtgcatcatgcctccgtggacttgtctggtcataac
ctggtcaatgctcaccaggcctcagtggttcccagcgctgccaccattgtcatcgtagtg
tgcgttagcttcctggtgtttatgatcatcctgggcgtgttccgcatccgagcttcacac
cagggcaccatcagagacactgagggaggcaaggagaatgagatggactgggacgactcg
gccctcaccatcaccgtcaaccccatggagacgtatgaggaccagcacagcagtgaggaa
gaggaggaagaggaggaggagagcgaggacggagaggaggaagatgacatcaccagcgcc
gagtcggagagcagcgaggacgaggaggccggagagccagaggaccagcaggcagccagc
agacagcagcagctggagtgggacgactccaccctcacctactaa
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