Ammodytes marinus (lesser sand-eel): 307253108 Help Entry 307253108         CDS       T12006                                  Symbol itga5 Name (RefSeq) integrin alpha-5   KO K06484   integrin alpha 5 Organism ammm  Ammodytes marinus (lesser sand-eel) Pathway ammm03266   Virion - Herpesvirus ammm04145   Phagocytosis ammm04510   Focal adhesion ammm04512   ECM-receptor interaction ammm04517   IgSF CAM signaling ammm04518   Integrin signaling ammm04810   Regulation of actin cytoskeleton ammm04820   Cytoskeleton in muscle cells ammm05100   Bacterial invasion of epithelial cells ammm05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ammm00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     307253108 (itga5)  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     307253108 (itga5)    04517 IgSF CAM signaling     307253108 (itga5)    04518 Integrin signaling     307253108 (itga5)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     307253108 (itga5)   09144 Cellular community - eukaryotes    04510 Focal adhesion     307253108 (itga5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     307253108 (itga5)    04810 Regulation of actin cytoskeleton     307253108 (itga5)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     307253108 (itga5)   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     307253108 (itga5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ammm04147]     307253108 (itga5)    04515 Cell adhesion molecules [BR:ammm04515]     307253108 (itga5)    04090 CD molecules [BR:ammm04090]     307253108 (itga5) Exosome [BR:ammm04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    307253108 (itga5) Cell adhesion molecules [BR:ammm04515]  Integrins   Integrin alpha subunits    307253108 (itga5) CD molecules [BR:ammm04090]  Proteins   307253108 (itga5) SSDB OrthologParalogGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3 Motif Other DBs NCBI-GeneID:  307253108 NCBI-ProteinID:  XP_079887107 LinkDB All DBs Position 7:complement(6837524..6875744) Genome browser AA seq 1061 aa AA seqDB search MGLERRLRVKTPGIADHLAGSLLCIIGLLLTFSQPLCEAFNLDVENPAVYSGPNGSYFGY SVDFYLADSSSKSVVIGAPKANTTQVKITEGGSVFYCPWSLSQSDCHPIEFDTSGDRHML INNTEHQVDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDTPRSDATGTCYLSAHNFTK FVEYAPCRTEISDAVGQGYCQGGFSADFTTDGKVVLGGPGSYFWQGQVISAAKEDIIKSY YPGYHIQYVESQIQTKQIHAQNDDSYQGYSVAAGEFSGDQVEDFVAGLPKGLMLYGSVSI LNGTDLKTMINYTGEQMGSYFGYAVATTDINGDGMADLLVGAPMFMVRGSDGRLEEMGRV YVYLQRGPVDLEPRLPHFTGTQVYGRFGSTIAALGDLNQDGFNDVAISCPFGGEEQQGLV YIYNGYSEGLREKPSQVITGQWAAGTIPSSFGFALRGAKDLDMNGYPDLIVGAFGVDKAL LYRSRPIVDTSASLTVYPTMINPEEKNCILTNGNSSTPVSCVNLSFCITADGKHLPDALD FQVEVKLDSHKHKQKSAVKRALFLDTQQPLLQRSVRLRHGERVCNHTKIYLRDEKDFRDK LSSIYVALNFSLDPTAAADSHGLRPILNYQATNLIEQKTQILLDCGEDNICVPDLKLAVQ GNRKEVYLGDDNSLTLTFNARNEGEGGAYEAELYVVLPPEADYSGISRNNESLTQLTCSY ETDQNQTRYLSCDLGNPMKSGTNLWAGLRFTVPRLKDTHKTVQFEIQIRSKNENNSHSEV VPYKLEVVVQADVILQGVSRPDKVFFPPANWKVTKVYEDEQDVGPSVEHVYELVNNGPSR ISHTLLELRCPFSVQGQTLLYPLEFSTEGPINCTADKHMNHRDLKLQRLPSDPPILALKA HEHHVERRDVHKNQLAHLTNLSCSNADCWAVQCNVGLLEKGTTAILKVRSRVWAETFMER SYKQYVLECLARYSVLKMPYAILPRYAPSGHKKVVTPVIWNKPDIENSVPLWIIILAILA GLLLLALLIYVLYKLGFFKRSLPYGTAMEKAQLKPQAASEA NT seq 3186 nt NT seq  +upstreamnt  +downstreamnt atgggcttggaacgacgacttcgcgtaaagacgccggggatagcggaccatctcgccggc tcactcctttgtatcatcgggctattactcactttttctcagcctctctgcgaggcgttc aacttggacgtggagaacccagctgtttacagcggacctaacgggagctacttcggatat tccgttgacttttatttggctgattcttccagcaagagtgtggtgatcggagctcccaag gccaatacaacgcaagttaaaatcacggagggaggatctgtcttctactgtccgtggagc cttagccagtcggattgtcaccccatcgagtttgatacttcaggggatcgccacatgttg atcaacaacacggaacatcaggtcgatttcaagtcccaccaatggttcggcgccactgtg cgttctcatggtgacacaattctggcttgtgcacctctctactcctggaggactgaaaag gataccccccgctccgacgccacaggaacctgctacctctcagctcataatttcaccaaa tttgttgagtacgctccgtgtcgcacagagatcagtgacgcggtgggacaaggctactgt cagggaggattcagcgccgactttacaacggatggcaaagtggtattaggagggccgggc agctacttctggcaaggtcaggtgatctctgcagctaaggaggacattatcaaatcatac tacccaggctaccatatacagtatgtggagagccagatccagaccaaacagatccatgct caaaatgatgacagctaccaaggctactctgttgctgctggcgaattcagtggtgatcag gtggaagattttgtggctggccttcccaaaggactcatgctttacggttcggtgtctatt ctgaatggtacggatctgaagaccatgattaactacactggtgagcagatgggatcctat ttcggctacgcagtggcaacgactgacatcaacggtgatgggatggctgacctgcttgtg ggagctccaatgtttatggtccgtggttccgatggccgtctggaagagatgggccgggtc tatgtttacctacagcgtggccctgttgacctggagcctcgcctgcctcactttaccggt actcaggtgtatgggagatttggcagcaccattgcagcattgggagacttaaaccaggac ggtttcaatgacgtggctattagctgtccgtttggaggtgaggagcagcagggactggtt tacatctataatggatactcagaaggtctcagggaaaagccttctcaggtgatcactggc cagtgggctgctggcactattccttccagctttggatttgccctcagaggagctaaggac ctggacatgaatggatacccagatctcattgttggtgcatttggagttgataaggcactt ctctatagatcccggcctatagttgacaccagtgcatctctgaccgtttaccccaccatg atcaaccccgaggagaagaactgcatactcaccaatggaaacagcagcactcctgtttcc tgtgtcaacctgagtttctgcataaccgcagatgggaagcacctaccagacgcactagat ttccaggtggaggtgaagctggacagtcacaagcacaagcagaaaagtgcagtgaagagg gctttgttcctggatacccagcagcccctgctccagaggagtgtgaggctgcgccatggg gagcgtgtgtgcaaccacacaaagatctacctcagagatgagaaagacttcagggataaa ctttcctccatttacgtggccttgaacttcagtttggatccaacagcagcagcagactcc cacggcctgaggcccatcctcaactatcaggccaccaacctgatcgagcagaagactcag attctgctggactgtggagaggacaacatctgcgttcccgacttaaagctggcagtccaa gggaacaggaaggaagtctacctgggtgatgacaactcgctgaccttgactttcaatgcg cggaatgagggtgagggaggggcgtacgaggcagagctgtatgtggtgttgccccccgaa gccgactacagcggtatctcccgcaataatgagagcctgacccagctgacctgcagctat gagacggaccagaaccagacccgctacctcagctgtgatctgggcaaccccatgaagtct ggcactaatctgtgggcaggactgcgcttcacggtgccacggctgaaggacacgcacaaa acggttcagtttgagattcagattcgcagtaaaaacgagaataattcccacagtgaggtc gtaccctacaagctggaggtggttgttcaggctgatgtcattctgcaaggtgtgtcccga ccagataaggtcttcttcccaccggccaactggaaggtgaccaaagtctacgaggatgag caggatgttgggccttcagtggaacacgtctatgagctggtgaacaacgggcccagtcgg atcagccacacccttcttgagctgcgctgccccttcagtgtccagggtcagactctcctc tacccgttggagttctccacggaaggccccataaactgcaccgccgacaaacacatgaac cacagagacctcaaactccagcgcctgccgtcagatccacctattcttgcactgaaggca catgagcaccatgtcgaaaggagggacgtccacaagaatcaactggctcatctcactaac ttgtcctgttctaatgcggactgctgggcggtccagtgcaacgtgggtctgctggagaag ggcaccaccgccatcctcaaagttcgatcccgcgtctgggccgagaccttcatggagaga tcctacaagcagtatgtgctggagtgcctggctagatacagtgtgctgaagatgccttac gccatcctaccaagatatgctcccagtggacacaaaaaggtggtgaccccggtgatatgg aacaagcctgatattgaaaactcagttcctctgtggatcataatcttggccattctggct ggtttactgcttctggctctactcatctatgtcctatacaagcttggcttcttcaagcga tccctaccttacggcacggccatggagaaggctcaactcaaaccacaggctgcctcagag gcctag

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