Ammodytes marinus (lesser sand-eel): 307253111
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Entry
307253111 CDS
T12006
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
ammm
Ammodytes marinus (lesser sand-eel)
Pathway
ammm00310
Lysine degradation
ammm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
307253111 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ammm03000
]
307253111 (prdm16)
03036 Chromosome and associated proteins [BR:
ammm03036
]
307253111 (prdm16)
Enzymes [BR:
ammm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
307253111 (prdm16)
Transcription factors [BR:
ammm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
307253111 (prdm16)
Chromosome and associated proteins [BR:
ammm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
307253111 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
SET
zf-H2C2_5
zf-C2H2_11
zf-C2H2_jaz
zf-BED
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
307253111
NCBI-ProteinID:
XP_079887114
LinkDB
All DBs
Position
7:complement(8211635..8391203)
Genome browser
AA seq
1330 aa
AA seq
DB search
MRSKARARKLAKNDSEPVDSMYDTETDLAGLAASSSGGGGGAYSPEEDAEDGTVNNINNM
SPLPSPTSPSHTNNNNHSHHLLLHPHMYASHHHNHHNSHPHHQHLLHNSNSNSSNEQDFT
TPKEGSPYEAPVYIPDDIPIPGDLELRESTVPGAGLGVWAKTRIDAGERFGLHSSTLHHG
AASKDSSFGWEQMMNDHEDASPNSCVKKVVDDMGNVKFAPDTSLEAGNSSWLKYVRSAPS
FEEQTLAACHLTGDQMYYKAVRDIEAGEELLVYMKDGIFPEGSMAPHLQDEQMYRCEDCD
ELFSSTLELRRHQKYSCTSTGSLFDSLREDFKQEREDSDEPVHECKDCEKIFPNEYSLGQ
HMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCDKVQHTRHVFTDPSNL
QRHIRSQHVGARAHTCPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRH
KRMHADCRTQIKCKDCGQLFSTTSSLNKHRRFCEGKNHYGSPAGMFNPGIPMSSSPIMAK
VKSHHPHLAGLNQSGLTFADYFPSRPHPHAGLTFSPGPHGFPSLSHGFPGMFNPSLYPRP
PLLPASPLIKSPLGSSSQEVKLPRSPLDGPPMSLVSSTNSNGGNILSQLEDKEKENKLDL
SSSGEAKPKSKMVDMSDGSDLEDVNTTSGTDLDTTTGTASGDGSDLDSDGESERERSGKR
RKPSGAVSSQEGHQLEDTNSALISAVSSSGNFGINRPFFSSASSQHSFFPPPDEQALPPT
TSNANAVTTDSIKAIASIAEKYFGPGLIGLHQEKKMGPMPYHSMFPFQFLPNFHNSLYPF
SANRGALNPSMFFKAEPKSPREQLHKMVGAPGAPASTAESPFDLTTQSKESKLAPPTPTR
PSNPNSSTGSSSGPLAVSSSEEQPLDLSIGRRSRGGHNGVAAEAHNRKNHMFGIGKGVCI
KDEALVGFPHPHSQLLHQSAMAQHQHQQAQPHQPPPLHYAKPSAFFMDPIYSRVEKRKLL
DPVGALKEKFLRPSPSLFHPQMSAMENMTEKLENFGALKLDAPPNSLQHSAHPLFNFRSP
PPSLSDAILRKGKERYACRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQ
RHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGMLSNLGTTISSPN
SEPDNHALLDEKEDSYFSEIRNFISNSEMNQASSSTDKRSEQAEEEHPAGHSLSNSKLGL
RGLEEEEEEVEGDDEEEEEGSLTEKSHDEAPESPSPVTTGAYEEEEEEEEEETDTTPLAM
SYEHTRRLMQ
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgagccagtggacagc
atgtacgacacagagacggacctcgcgggcttagcggcctccagcagcggaggaggaggc
ggagcttacagcccagaagaggacgcggaggacggcacggtcaacaacatcaacaacatg
tccccgctgccctcacccacctcaccttcccacacaaacaacaacaaccacagccatcac
ctgctgctgcacccacacatgtatgccagccaccaccacaaccatcacaacagccacccc
caccatcaacacctcctgcataacagcaacagcaacagcagcaatgagcaggacttcact
acacccaaggaaggctcgccctacgaggcgcccgtctacattccagatgacattcccatc
cccggggacctggagctgagggagtccacggtgcccggcgcaggcctgggcgtctgggcc
aagacccgcatcgacgccggagagaggttcggtctacacagcagcacgctgcatcacggg
gccgcaagcaaagacagttccttcggatgggagcaaatgatgaatgaccatgaagatgcc
tccccgaacagctgcgtcaaaaaggtggtggacgacatgggcaacgtgaagtttgcgccg
gacacaagcctggaagccggcaacagcagctggctcaaatatgtccgctcggccccctca
tttgaggagcagaccctcgccgcctgtcacctcaccggagaccagatgtattataaagct
gtccgggacattgaagcaggggaggagcttttagtgtatatgaaggacggtattttcccc
gagggatccatggcacctcacctacaagacgagcagatgtaccgctgtgaagactgtgac
gagctgttctcctccacgctggagctgcggcggcaccagaagtattcatgtaccagcaca
ggctccctctttgactcactgagagaggacttcaaacaggaacgagaggacagcgacgag
cccgtccacgagtgtaaagactgtgagaagatcttcccaaatgagtacagtctgggccaa
cacatgatagtacatactgaggagagggagtacaagtgtgaccagtgccccaaagccttc
aactggaagtccaacctcatccgtcaccagatgtcacatgacagtggcaagcgttttgag
tgtgaaaactgtgataaggtacagcatacccggcacgttttcacagatcccagcaacctt
cagcgccacatccgctcccagcatgtgggggcgcgcgcacacacatgtcctgagtgtggc
aagacctttgccacctcgtcagggctcaagcagcataagcacatccatagcagtgtcaaa
ccctttatctgcgaggtgtgccacaagtcctacacccagttctccaacctctgccgccac
aagcgtatgcatgctgactgccgtacccagatcaaatgcaaggattgtggacagctgttc
agcactacctcctccctcaacaagcaccgccgcttctgtgagggcaaaaaccattatggc
tctccagcagggatgttcaaccctggcatccccatgagctccagccctattatggccaag
gtcaagtcccaccatccccaccttgctggtctaaaccagtcaggtttaaccttcgctgac
tactttccctcccgacctcacccccatgctggcttgaccttctccccaggacctcatggc
ttcccatccctctcacacggtttcccaggtatgttcaacccttcactatatccacgaccg
cctttattgccagccagtccattgataaagagcccactgggcagcagcagtcaggaggtg
aagctgcctcggagtcccctagatggccctccgatgtcccttgttagctccacgaacagc
aatggaggtaacattttgagtcagctggaggacaaagagaaagagaacaagctggatttg
tcttcaagtggtgaagccaagcccaaatctaaaatggtagacatgtctgacggcagtgac
cttgaagacgttaacaccacaagtgggacagatttggacaccaccactggtactgcttca
ggtgatggttctgacctggacagcgatggagagagtgaacgtgagcgatctggtaaaaga
aggaagccgtcgggggctgtatcaagtcaagaaggccaccagttagaagacacgaacagt
gcattgatatcagccgtgtctagttcggggaactttggtatcaatcgtccctttttctct
tctgcctcgtcccagcactccttcttccctccacctgatgagcaagccctcccgcccacc
acctcaaatgccaatgcagtcaccacagattccatcaaagccattgcctccattgcggag
aaatattttggtccaggtttgattggtcttcatcaggaaaagaagatgggtccaatgccc
taccattccatgtttcccttccagttcctgcccaactttcacaactccctctatcccttc
agtgctaatcgaggtgccctcaatcctagtatgttctttaaggcagagcccaagtcacct
cgtgagcagctgcacaagatggtcggtgccccaggagctcctgcttcaacagcggagtca
ccatttgatctcaccacacagtccaaggagagcaagttagctccccccactcccacacgc
ccctcaaaccccaacagtagtactggtagcagcagtggacctttagcagtgtctagcagt
gaagaacagccattggatctcagcattggcaggcggagtcgaggtggtcataatggtgtg
gcagctgaggcacacaatagaaagaaccacatgtttggaattggaaagggggtatgcatc
aaggatgaagccctagttgggtttccacacccccattcccagttattgcaccaatccgcc
atggcccagcaccagcaccagcaggcacagccacaccagccgccacccctgcactacgcc
aagccatcagcattcttcatggaccccatatacagcagggtggagaagaggaagctactg
gaccctgtaggagctctgaaggaaaagttcctcaggccctcaccatcactcttccatcca
cagatgtcagccatggagaacatgacggagaagctggagaactttggcgctctaaaactg
gacgcaccgcccaactcactgcaacactcggctcatccgctgtttaacttccgctcgcca
ccaccctccctctcagacgccatcctccgcaagggcaaggagcgttacgcttgcaggtac
tgtgggaaaatcttccctcgatcggcaaacctcaccagacacttgcggacacacacaggg
gaacaaccctacaggtgtaaatactgtgaccgctcgttcagcatctcgtccaatcttcaa
cgccacgttcgtaacatccataacaaggagaagcccttcaagtgtcacctgtgtaaccgc
tgctttggtcagcaaaccaacctcgaccgccatctcaagaagcacgagcatgagaacatt
cctgtgagccagcagtccgggatgctttccaacctaggaaccaccatctcctccccaaac
tccgagccagacaatcatgcacttttagatgagaaggaggactcgtacttctcagaaatc
cgcaacttcatttccaacagtgagatgaaccaggcctccagctccacggataagagatca
gagcaggccgaagaggagcatccagccggccacagtttgtccaactccaagctgggtctc
cggggtctggaggaggaggaagaggaggtggagggtgatgatgaggaggaggaggaaggc
agcctgacagagaagtctcatgacgaggcgcccgagtccccttcccccgtcactacagga
gcgtatgaggaagaggaggaggaggaagaggaggagacagacacgactccgctagctatg
agctatgaacacactcgcaggcttatgcaatga
DBGET
integrated database retrieval system
