Ammodytes marinus (lesser sand-eel): 307257104
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Entry
307257104 CDS
T12006
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ammm Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ammm04990
]
307257104 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
ammm04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
307257104 (lrit1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
LRR_5
LRR_14
C2-set_2
LRR_EndoS
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
307257104
NCBI-ProteinID:
XP_079892364
LinkDB
All DBs
Position
11:<6642639..>6646557
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AA seq
653 aa
AA seq
DB search
MFLALLLGLYVAAGELVSPVGSCPSQCSCFYHNLSDGSKARSVICNDPEISAVPVGFPVD
TSKLRIEKTAIQRIPSEAFNYLSSLEFLWMSFNTLTALNPGSFQGLLNLEELRLDGNALT
TFPWESLMDMQSLRLLDLHNNQLTSLPAEATTYIKNLTYLDLSSNSLLTLPSEVLSTWLV
AKPVQGPESSKIILGLHDNPWVCDCRLYDLIQFQKSPTLSVAFIDTRLRCSDPESVSGVL
FSDAELRRCQLPRIHTAVARVRSPVGNNVLLRCGTIGVPVPDLTWRRADGRAVNGTVQQE
TSKEGITWSILSVPAVSVRDSGKYICKATNYAGNAEAVISLMVSNSPKPEGNQTGNDKKA
KVKKPNPMGKAAYQEKLVARYVAPTSNPLLLPAVDQGLPPGLGPADLRQASYSVADRGIT
PGPATSPNPDALLDLEKTNLSNLAANTSSQQQDPPRVVRSVKVVGDTDNRIFLNWRSPKA
KNTTAFSVLYAVFGERDMRKINVAPGENRVMIEGLVPKTKYIACVCVRGLIPKKEQCVIF
STDEAASATGTQRLINVIVITVACVIAVPLTVIVCCGALKRRIQKYWGKKSKDIQDSYVT
FETLSPGTKAKGLETEYLNRQNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgcgctgctcctggggctctacgtggccgcaggtgaactcgtctccccagtg
ggctcctgtccgtctcagtgcagctgtttctaccacaacttgagtgatggatcgaaggcc
aggagcgtgatttgcaatgatcccgagatatctgctgtgcctgtcgggttccctgttgac
acgtccaagctgcggattgaaaagacggccatccagcggataccaagcgaagccttcaac
tacctctccagtttggagttcctgtggatgtctttcaacacgcttacggcgttaaacccg
ggcagtttccaagggctgctcaacctggaagagcttcgactggatgggaatgccctcacc
acttttccctgggaatctctcatggatatgcaaagcctcagacttctcgatttgcacaat
aaccagctcacctcgctgccggcggaggcaaccacttacatcaagaacctcacctacctg
gatctgtccagcaacagcctgctgacgctgccgtcggaggtgctgtccacctggctggtg
gcaaaacccgtgcaaggaccagagagctccaaaattatacttggtctccatgacaacccc
tgggtgtgcgactgtcggctctacgacctcatccagttccagaagtcccccactctttcc
gtggcgttcattgacaccaggctccggtgttcggatccggagagcgtgtctggagttttg
tttagcgatgcggagttgcggcgatgtcagctcccacgtatccacactgcagtagcaaga
gtccggagtcctgttgggaacaacgtgctgctccgctgtggcaccatcggagtccccgtc
ccagacctgacttggcgcagggcggatgggcgggccgtgaatggaacagtccagcaggaa
acctcaaaggagggaatcacctggtcgatcctcagcgtcccggctgtgtctgttcgtgat
tcggggaaatacatctgcaaggctactaactacgcggggaatgctgaagccgtcatctct
ctcatggtctctaactcacccaaaccagagggcaaccaaacaggcaatgacaagaaagcc
aaagtcaagaaacccaatccgatgggcaaagctgcctatcaggagaaactagtggccaga
tatgtggctccaacatccaaccctttattgctgccagcggttgatcagggccttccacct
ggactgggtcctgctgatcttcgacaagccagttatagtgtggccgacagaggcatcacc
ccggggccagccacctcccctaacccagatgcgttgctggatcttgaaaagactaattta
agcaacctggcggcgaacacctcgtcacagcagcaggatccacccagggtggtccgctct
gtcaaggtggtgggggacacagacaataggatattcctgaactggaggtctcccaaggcc
aagaacacaacggcatttagcgtactatacgccgtgttcggagagagggacatgaggaag
atcaatgttgcgcccggggagaatcgcgtgatgatcgaggggctggtgcccaagaccaag
tacattgcctgtgtgtgtgtgcggggcctgattcccaagaaggagcagtgtgtgatattt
tccaccgacgaagcagccagtgccaccggtactcagaggctgatcaacgtgattgtgatc
acagtggcctgtgtcatcgccgtcccgctcacggtcatcgtgtgctgcggggcgctgaag
agacgcattcaaaagtactggggcaagaaatccaaggacatccaggattcctacgtgact
tttgaaacgctgtcaccgggcaccaaggccaaagggctggagaccgagtatttgaacaga
cagaacccggaggagtccaaccggctgctgtcggcccgctccagcctggactcagaggcc
acggccaagatagagggacagcccaacgagtacttctgctga
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