Ammodytes marinus (lesser sand-eel): 307258521
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Entry
307258521 CDS
T12006
Symbol
ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
ammm Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ammm03037
]
307258521 (ttc21b)
Cilium and associated proteins [BR:
ammm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
307258521 (ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21
ARM_TT21_5th
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_8
TPR_16
TPR_1
TPR_6
ANAPC3
TPR_7
TPR_12
TPR_CcmH_CycH
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_11
TPR_21
TPR_9
Wzy_C_2
TPR_15
PknG_TPR
TPR_Slam
TPR_Psidin_N
Motif
Other DBs
NCBI-GeneID:
307258521
NCBI-ProteinID:
XP_079894211
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All DBs
Position
12:16989679..17003336
Genome browser
AA seq
1316 aa
AA seq
DB search
MEDEEVALALIRYYCYEKYFNHAVNAAADGQRKFSNDIYTFYHAYGALMQDQIQEALAEL
ETIRDVRDLSLCTLMALVYAEKKKTNPDREVIQELDAKVKEDRKSASPKSLYHAGMFLWL
LGRNDKAREYTERMIKLSNGSREGIVLKAWIDVTSGKDAYARKAGKYFDEGLKEKPDVFA
LMGKAHYYEYRQNYSGALEMVNQVIVVFSGFMPALIRKMKLLLSLQDWEQTIDAAHRLLQ
KDKNNPEALRMLALHSLCRDGDVTETVKQLSNLISSLEIVEPCNPELLYRMSLAFTRVCG
RNEKVNEQTFRMVERAFSKASGDSDLATELGYQMVLQGRIKEAMKWYKTAMTLDETSVSA
LTGIIRCQLIEGQLEDAQQQLEFLTEIQQSIGKSGELLYLRAVLASKKRRPQEEVTNLLN
DAVDTHFSTLQGLPLGVEYFEKLNPDFLLEIVKEYLALCPAQPPAQGQPPAPQLQHCATL
LDTVVKIVPGLPQGVFLLAKVRYQSGDIDAAQSSLQHCLDQCPSHADAHLLMAQIHLTQG
NFTLCSQSLELCLSHNFEVREHPLYHLIKAQAQKKMGELVEAIKTLQMAMSLPGVRRAAP
ASKSKNRKVELSPSDCVSVVLELAEALWLNGEQHEAAKVMQDAINEFSGTPEELRVTIAN
ADLALLRGDTELALSMLRNITPEQPYYIQAKEKMGDIYLNHRKEKRLYASCYREMVEKLP
NPHTYLLLGDAYINIQEPEKAIEVYEHALKKNPKDGALASKIGKALVKTHNYVKAINYYE
AALKTEQQNFLRYDLAELLMKMKQHERCERVLHEALAHEAVNELQALSDDCRYLVLLAKI
QNKVEKNEEALLSLQRARDVQAKVLKRVQLEQPDAVPAQKQLAAEICSEIAKHYTSQRGY
ERAVKFYKEALVYCETDRKVMLELSRLYLTLDEVDACHEQCSVILKNDQFNEDAVLMMAD
IMFRKTDYDKAVFHFQQLLERKPDNYQTLSRLIDLLRRAGKLEEVPRFIDMAEKHSSRTK
FDPGFNYCKGLYLWFTGEPNDALRHFNKARKDNDWGQNAVYNMIEIYLNPDNDIMGGEVF
ETLDGEMGNSTEKQESEQLAVRTAEKLLKELKPQTAGGHIQLRILENYCSLATKQKSNVE
KALSVFTEVANNEKDHVPALLAMATAYMMLKQTPRARNQLKRIAKMNWSNVDADEFEKSW
LLLADIYIQSGKYDMAGDLLKRCLNHNKSCCKAYEYLGYIMEKEQAFRDAANNYELAWKY
GNRTNPTIGYKLAFNYLKAKRHVDAIDVCHKVLAAHPNYPRMRKDILDKARVALRS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagaggtagcgttggctttgatcaggtactattgctatgaaaagtatttc
aatcatgctgtcaacgctgcagcagatggtcagaggaaattcagcaatgatatctacact
ttttaccacgcatacggtgccctcatgcaagatcaaattcaagaagccttggcagagctg
gaaacaataagagatgtaagagatttgtctctctgcacattaatggcccttgtatatgct
gagaagaaaaagacaaacccagacagagaagtcattcaagaacttgatgctaaggtcaaa
gaggatcgtaaaagtgcatctcccaagagtctgtaccatgcagggatgttcctttggctt
ttggggcgaaatgataaggcaagggagtacacagagagaatgatcaaactgtccaacggc
tctagagaggggatagtcctaaaagcctggatagatgtgacatctggtaaagacgcgtat
gccagaaaagctggaaaatactttgacgagggactgaaagagaaaccggatgtttttgct
ctgatgggaaaggcacattactatgaatatcgtcagaactactccggagcattggagatg
gttaaccaagtcatcgttgttttttctgggttcatgcctgccctcatcagaaagatgaaa
ctgttgctcagccttcaagactgggagcaaaccatagatgcagcacacaggcttttacag
aaggataaaaataacccggaggcactacggatgctagctctgcattcgttatgtagagat
ggagacgttactgagacagtgaagcagctctcaaacctcatcagcagcttggagattgtg
gaaccatgcaacccagagcttttgtacaggatgtctctcgctttcacccgtgtttgtggg
cgaaatgaaaaggtgaatgagcagacatttaggatggtggaaagagccttctctaaagca
tcgggggactctgatttagccacagagttgggctaccagatggtgcttcaggggagaatc
aaggaagctatgaagtggtacaagacagctatgactctggatgagacgagtgtttctgct
ttgactggtataattcgttgccagctgatagagggacagcttgaagacgcccagcagcag
ttggaatttctcacagagatacagcaatcgattggaaaatcaggggagctactgtaccta
cgtgctgttctggcgtcgaaaaagcgccggccccaggaagaggtgaccaatctgttgaat
gacgcggtggacacacacttctccacactgcagggtctgcctctgggagtggagtacttt
gagaagctgaaccctgacttcctgttggagattgtcaaagagtatctcgcactgtgtcct
gctcagcctccagcccagggccagcctcctgctcctcagctgcagcactgtgccactttg
ttggatactgtggtcaagattgtgcctggtctccctcaaggggtcttcctgctcgccaaa
gtcagatatcagtctggtgacattgacgctgctcagagcagtctacaacattgtctggac
cagtgtccgtctcatgcagacgcacatctgctaatggcacagatccatttgacgcagggt
aacttcacgctgtgttcccagtctcttgaactctgcctcagccataactttgaggttcga
gaacatccgctgtaccacctgatcaaggctcaggctcagaagaaaatgggcgagctggtg
gaggctatcaagacactgcagatggctatgagtctccctggagtccgcagagccgcgccc
gcgtccaagtccaagaacaggaaggttgagctgagtccttctgactgtgtgtctgtcgtc
ttggagttagctgaggccctgtggctcaacggagaacagcacgaagcagcaaaggtgatg
caggatgccatcaatgagttctctggaacgccagaggagctgcgcgtcactatcgccaac
gcggacctggccctgctgcgcggtgacaccgagctggcactgagcatgctccgaaacata
actcctgagcagccctactacatccaagccaaggagaaaatgggagacatatatctcaat
cacagaaaagagaaacgtctgtatgctagctgttacagagaaatggtggagaagctgcca
aacccgcatacatacctcttactaggcgatgcttacattaacattcaagaacccgagaaa
gccatcgaggtgtatgagcacgctctgaagaaaaaccccaaagatggtgctttagccagc
aagattgggaaagccctggtcaagactcataactacgtcaaggcaatcaattactatgaa
gcggccctgaagactgaacaacagaacttcctgcgctatgacctggctgagctgctgatg
aagatgaagcaacatgagcgctgcgagagagtcctgcatgaagctctggctcatgaagca
gtgaatgaactgcaggcgctctcagacgattgccgttatctggtcctcttggcaaagatc
caaaataaggttgagaaaaatgaggaagctttactttccctacaaagagcgcgagatgtg
caggccaaggtgctgaagcgagtgcagttggagcagcccgacgccgtccccgcgcagaag
cagctcgccgccgagatctgctccgagatcgctaaacactacacaagtcagaggggatat
gagagagcggtcaaattctacaaagaggctcttgtgtattgtgagaccgatcgcaaggtg
atgctggagttgtcccggctgtaccttactctagatgaggtcgatgcgtgccatgagcaa
tgcagcgtcattttgaagaacgaccagtttaatgaagatgcagttctgatgatggctgac
attatgttcaggaagacagactatgacaaggcagttttccacttccaacaactcctggag
cgcaaaccagacaactaccaaactctttcacgactaattgacctgttgaggagggccggg
aagttggaagaggttcccagatttattgatatggcagaaaaacattcttccaggaccaaa
tttgacccggggttcaactactgcaaagggctttatctttggttcactggagaacctaat
gatgctctgcgacacttcaacaaagcacggaaagacaacgattggggtcaaaacgctgtg
tataacatgattgaaatctacttgaaccctgataacgacatcatgggaggagaagtattt
gagaccctggatggtgaaatggggaactccacggagaagcaggagtctgagcaactggct
gtgagaacggccgagaagcttctgaaggagctcaagccccagacagcgggtggacacatc
cagctgcgcatcctggagaactactgctctctggccactaagcagaagagcaatgtagag
aaagccctcagtgttttcacagaggtcgcaaacaatgagaaagaccacgtgccggccctg
ctggctatggccacggcgtacatgatgctcaaacaaactcccagagccaggaaccagctc
aaacgcatagctaagatgaactggagcaatgtcgacgcagacgaattcgagaagagctgg
ctgctcttggcagacatctacatccagtcggggaagtatgacatggccggggacctctta
aagagatgcctcaatcataacaagtcatgctgtaaagcttatgaatatctgggttacata
atggaaaaagagcaggcattccgtgatgcagcaaacaactatgaactggcttggaaatat
ggaaatcggaccaacccgactatcggatacaagcttgctttcaactacttaaaagcaaag
agacatgttgatgccatagacgtgtgtcataaggttctggccgctcatcccaactatcca
cgaatgagaaaagacatcctggacaaagcccgtgttgccctgagatcttag
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