Ammodytes marinus (lesser sand-eel): 307259509
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Entry
307259509 CDS
T12006
Symbol
sema6cb
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C isoform 1
KO
K06842
semaphorin 6
Organism
ammm Ammodytes marinus (lesser sand-eel)
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Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
307259509
NCBI-ProteinID:
XP_079895515
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Position
13:29522967..29684252
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AA seq
1106 aa
AA seq
DB search
MRLIRGLSPGPVLPAAFLLALTLAIVCCLPQPSSGATPFPQDLEPISNVGRESSYLYPSF
QGLMSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAVNLATSAEQIIPQQKLTWKSKDVE
KCTVRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQEGEEVVGQARC
PFESRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLH
AIEYGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCS
VPGDSFFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFSGKFK
EQRNSESAWTPVPEEQVPKPRPGCCAGEGSAAAYKSSTTFPDETLTFIKSYPLMDESVPS
VNDRPFFTRTTSRFKLTQIAVDTSAGPYKNYTVVFLGSDNGHVLKILSSTEGANASFNTQ
LLEDIDVYNPHKCSVWGEDRRVLGLELDRDHHSLFVAFSSCVIRVPLSRCSDYTTCKKSC
LSSRDPYCIWLKSGSCATVSPGFKGGFEQDVENGYHQHPDSCHDVLATTRKQNPALDSAY
GKTTPTIASTTNHEAPFPKEAGERGTGPDVPPPLGEQGSPDQEPIRVEMEGVRRPPELEK
TNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKKLSKDPEAPIPHALSLRSL
AKLNGLLDSQSKDEKMEVSSPKIYNSFFANSREHHPPRRNGHHGMSMGDLVHPHHHHLHH
SSELSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNIGSRPSSALLHHQQVF
PYSHSFSNGQPLVGHLHPDERKIHNVERVLSQQPYPGYSQKVMEVTSLDELLKHIHDASS
SKNAQLMSPQGLMASGGGGQLAFANRIQPQIPETESAPYYSSSTLPRDSLTRRMDVPPDI
PPHHQSTLERRHSSQRHSLIAAATKMPNGGGMGGGMGGGMGGGMGGGGGGMIPRQHSFSQ
RNGGPHQPPPLLARMNSTGSTCEVHYPHIPNGYLARQHSYNGDQQEVVQHRGAIVRRASS
LKPDVPPKPLFIPATSPVNQQGKFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgattcggggcctttctcctgggcccgtcctgccagcagccttcctcctggct
ctcaccttagccatcgtctgctgcttacctcagccgtcctctggagctacgccattcccc
caagacctggaaccaatcagcaacgtgggcagagaatcctcctacctctaccccagtttc
cagggcctcatgtcggacaacgacaccgtccgcctgggcctggacttccagagaatgctg
cggatcaaccacatgctctacatcgctgcccgggaccatgtgtttgccgtcaatctcgcc
acttcagctgagcagataatcccacagcagaaactgacttggaagtcgaaggatgtggag
aagtgcaccgtgagaggcaaaaacagcgacgaatgttacaactacatcaaagtgctggtt
cctcgcaacgacgagacactgttcgcctgcggcacaaacgccttcaaccccacctgccgt
aactataagatgtcaacactggagcaggagggagaggaggtggttggacaggctcgttgt
cccttcgagtcacgtcaatcaaacgtgggcctcttcgcaggtggtgatttctactcggcc
acgatgacggacttcttggcgagcgatgcggtgatctaccgaagtctgggagaaagtagt
cccgttctgcgtacggtcaagtacgactccaaatggctgcgagagccccatttcctccac
gccatagagtacgggaactacgtttacttcttcttcagtgagattgcagtagagtacacc
acacttggcaaggtggtgttctccagagtggcccgcgtgtgtaagaatgataacggcggt
tctccgagggttctggagcgttactggacgtcgttcctcaaagcgcgtctgaactgctcc
gtcccgggagactccttcttctactttgacgtcctccagtcgctcaccaacgttctgcag
attaaccaccggcccgccgtgctaggagtcttcaccacacaggctaacagcatcaccggc
tcggctgtgtgtgcgttctacatggacgacatagagaaagccttcagtggcaaattcaaa
gagcaaaggaacagtgagtctgcttggacacctgtccccgaggagcaagtccccaagcca
aggcctggttgctgtgccggtgagggctcagctgcggcctacaagtcctccaccactttc
ccagatgaaaccttgacgttcataaagtcgtatccgcttatggacgagagcgtgccctcc
gtaaacgaccggcccttcttcacccgcaccaccagcaggtttaagttgacccagatagcg
gtggacacctccgcagggccgtataagaactacacggtggtgtttctgggctcagacaac
ggacatgtgctgaagatcttatccagcacagagggggccaacgcatccttcaacacacaa
ctactggaagacattgatgtctacaaccctcacaaatgtagtgtgtggggtgaggacaga
cgggtgctggggctggagttggatcgggaccatcactctctgttcgtggcgttctccagc
tgtgtcatccgcgtcccactgagccgctgctccgactacaccacctgcaagaaaagctgt
ctgtcttcgcgggacccttactgcatctggctcaagtcgggcagctgtgccacagtgtct
cctggcttcaagggaggattcgaacaggacgtggagaacggttaccatcagcaccccgat
tcctgccacgatgtcttggcaaccactcgcaagcagaacccggctctagactcggcgtat
gggaagaccacacccacaatcgccagcacaaccaatcacgaagctccattcccaaaggag
gcaggtgaaagaggtacaggtcccgatgtcccgccccctctaggggaacaagggtcacct
gaccaggagccaatcagggtggagatggagggtgtgaggcgcccaccagagctggagaaa
accaaccacagtgtccattacactctgctcatcgcgtgtgttttggtggccttcgtcctg
ggcgcgttcctctccggcttcctggtctcctgctactgtaaccacacgggccacaagacc
aagaagttgtcgaaagatcccgaggccccgatcccgcacgccctgtccctccgcagcctg
gccaagctcaacggcctcctggacagccagagcaaagacgagaagatggaggtgtcatct
ccaaagatctacaactccttcttcgccaacagcagagaacatcacccaccgagaaggaac
ggccatcatggcatgtcaatgggagacctggtccacccgcaccaccaccatctccaccat
tcctctgagctgtccggcctccctacgccagactcaaccccggaactgcccatcaagagc
atgaaggccttcaagaaccagtgggagaagaaccagaactgcaacaatgccaaggagcca
aagtctcataacattggttccaggcccagctcagccctgctccaccaccagcaggtcttc
ccatactcccatagcttctccaacgggcagccgctggtgggtcacctccatccagacgaa
cgcaaaatccacaatgttgaacgtgtgctatctcagcagccttaccccggttactcccag
aaggtcatggaggtgacgtcactggatgagctcctgaagcacatccacgacgcgagcagc
agcaagaacgcccagttaatgagtcctcagggtctgatggctagcggcggtgggggtcaa
ctagcattcgccaaccgcatccaacctcagattcctgagacagaatcggccccttactat
agctcgtccaccctgccccgggacagcctcactcgacgcatggacgttcctccagacatc
cctccacaccaccagtccaccctggagaggaggcactcgtcacagaggcattcgctgatt
gctgctgccaccaagatgcccaacggagggggaatgggagggggaatgggaggtggaatg
ggaggtgggatgggagggggtggcggtggaatgatccctcgccagcacagcttcagccaa
cggaacggaggcccgcaccaaccgccgcccctcctggcacggatgaactcgacgggcagc
acctgcgaggtccactacccccacatccccaacggctacctggcccggcagcacagctat
aacggagaccagcaggaggtggtccaacataggggcgcgatagtccgcagggcctcctct
ctcaaaccggacgtccctcccaaacctttgttcatacctgccacgtccccggttaaccaa
cagggaaagttcaactactga
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