KEGG   Ammodytes marinus (lesser sand-eel): 307259520
Entry
307259520         CDS       T12006                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
ammm  Ammodytes marinus (lesser sand-eel)
Pathway
ammm04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ammm00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    307259520 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ammm04131]
    307259520 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ammm04147]
    307259520 (rab13)
   04031 GTP-binding proteins [BR:ammm04031]
    307259520 (rab13)
Membrane trafficking [BR:ammm04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    307259520 (rab13)
Exosome [BR:ammm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   307259520 (rab13)
  Exosomal proteins of colorectal cancer cells
   307259520 (rab13)
GTP-binding proteins [BR:ammm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    307259520 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 SRPRB RsgA_GTPase PduV-EutP Septin AAA_7 DUF6974 AAA FeoB_N AOC_like AAA_22
Other DBs
NCBI-GeneID: 307259520
NCBI-ProteinID: XP_079895559
LinkDB
Position
13:20254147..20259963
AA seq 201 aa
MAKKYDFLFKLLLIGDSGVGKTCLIIRFSEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLA
NKCDIEAKRKVTKETGEKLAKDHGISFFETSAKASINVEESFMSLAREILQKSSSKKQGP
TGREVKITSGTEKKSSKCVLL
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcgaaaaagtatgatttcctattcaaattgctactcatcggggacagcggagtgggc
aaaacatgtctgattatccgtttctctgaggacaatttcaactccacgtacatctccacc
atcggcatcgactttaaagtaaaaactattgaagtggaagggaagaaagtgaaactacaa
gtctgggacacagcagggcaggagaggttcaagaccattacgacagcctactacagagga
gccatgggcatcatcctggtctacgacatcacagacgaaaagtcctacgaaaacattcag
aactggatgaagagtatcaaagaaaatgcatcagctggggtcagtcgcatgttactggct
aataagtgtgacattgaagcaaagcggaaagttaccaaggagacaggagaaaagctggca
aaagatcatggcatcagcttctttgagacgagtgcaaaggccagcatcaacgtggaggag
tcttttatgtctttggcacgcgaaatactacagaagtccagcagcaagaaacaaggcccc
acaggccgagaggtgaaaatcacaagcggcacagagaagaaatcctccaaatgtgttctt
ctttag

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