Ammodytes marinus (lesser sand-eel): 307259771
Help
Entry
307259771 CDS
T12006
Symbol
syngap1b
Name
(RefSeq) synaptic Ras GTPase activating protein 1b
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
ammm Ammodytes marinus (lesser sand-eel)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PH_2
Motif
Other DBs
NCBI-GeneID:
307259771
NCBI-ProteinID:
XP_079895875
LinkDB
All DBs
Position
13:<27603814..27724931
Genome browser
AA seq
1428 aa
AA seq
DB search
MSYVPFQDARCAVPPSYHHHHHHRTQAHSFHAAPSYDRPAPERPSYERPSFSRPSFSRPP
PERPSYDRPSHDRTPNDHWNPGLRVSAANQIYMLDQEEVHPLLMRERRSESHRNKLLRRT
VSVPVEGRQHPEMDPRARRKSIATGKQPSMEVPPSAPIQPFRQSSFLSRRLKGSIKRAKS
QPKLDRTSSFRHMILPRFRSADQERTRLMQSFKESHSHESLLSPSSAAEALDLTLDEDAI
IKPVHSSILGQEYCFEVTTTSGTKCFACRSAAERDKWIENLQRAVKPNKDNSRRVDNVLK
LWIIEARELPAKKRYYCELCLDDMLYARTTSKPRTDTVFWGEHFEFNNLPAVRNLRLHLY
KETDKKRRKEKSTYLGLVSIPISSITGRQFVEQWYPVIQPSVLTKGAGGGGGKIINASLR
LKSRFQTMNILPMELYKEFAEYVTNNYRTLCAVLEPVLSVKSKEEVACALVHILQSTGKA
KDFLSDMAMCEVDRFIDREHLIFRENTLATKAIEEYLKLIGHKYLKDAIGEFIRALYESE
ENCEVDPMRTPPSVLADHQANLRMCCELALCKIVNSNCVFPRELKEVFASWRVRCAERGR
EDIADRLISGSLFLRFLCPAIMSPSLFNLTQEYPDEQTSRTLTLIAKIVQNLANFSKFGT
KEEYMCFMNEFLEMEWGSMQQFLYEISNVDSVSNAGGFEGYIDLGRELSILHSLLWEVMA
QLSKDAIIKLGPLPRLLNDISMALRNPHLQRQPSHQTDRVQERQADRLLSRPSFNRGISS
EFQNLMMRDLNSSIDITRLPSPTSTGGVMPSRNQLSFQDRDHPHRVSSKEMFYVSRPPLA
RSSPAYCTSSSDITEPDPKDSPMNSVSNLQSVEMLNSSQASIAGMGSFGGLSSGGGGGLG
SGLSSQLRAGGRLSAGSGGSSMSGGLRLSQLSQMGTTTDSLSQQQQQQAAAMRYPLSFQN
PLFHLATADGPQHQQQHQPQHHQQQQHSRAQPPAPLLLTPDADPSHQSYVPQFAHGGFSR
SEDLSTLRTRDGHLGQPSIIHSHSYSDDYSRADYGRRQMSIHVQETLQQQQQQLMGMVSQ
TGTSHSSLATTPPTTVQPMRQSSVAPPPAQRVKSQTSHQLSVSAAAAPAAPAKTRPPSGN
LLPSPESGGYGGRQHGNRQLSVKDNTAPGLPHQQSSVRENQSPQGTTNQSTQQSPQQQAQ
QQQQQQQHLLKPTIGKQGSQSPSTLNPNPTPNERTVAWVSNMPHLSADIERSRIDREEFK
LKEYSKSMDESRMDRVKEYEEEINSLKERLSMSHKKLEDYERRLLTQEQQTNKILLQYQN
RLDDSERRLQRQQVEKDSQIKGIISRLMAVEDEIRGPPVIEPKTRIFADQGRRQSILVQP
RLAPVPPRVSSHSHSFMEDNVERKWVMHHRAAGWHSQMSRALSRDAIG
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgttccctttcaagatgcaaggtgtgccgtccccccctcctaccatcaccac
caccaccatcgcacccaagcccactccttccacgctgctccgtcctacgatcgccccgct
cccgaacgcccctcgtacgagcgcccctccttcagccgcccttccttcagtcgtccccct
cccgagcgcccctcctatgaccgcccgtcccacgaccgcacgcccaacgaccactggaac
cccggtctgcgtgtgagcgccgcaaatcagatctacatgttggaccaggaggaggtacat
cctttgctgatgcgcgagaggcgctcagagtcccacaggaacaagctgctgcggcggaca
gtcagtgttcctgttgagggaaggcaacatcctgagatggaccctcgcgcccggcggaag
agcatagccacggggaagcagcccagcatggaggtccctccctctgcccccattcaaccc
ttccgacaatccagtttcctcagtagaaggttgaagggctccatcaagagggccaagagt
cagcccaaactggaccgcaccagcagtttccgccacatgatcctcccccgcttccgcagt
gccgaccaagaaaggacccgtttgatgcagagcttcaaagagtcccactcccatgagtcc
ttgctgtctcccagcagcgctgccgaggcactggacctcaccctggacgaggatgccatc
atcaaacctgtccactccagcatcctgggacaagagtactgctttgaggtgacaacgaca
tcgggaaccaagtgctttgcgtgtcgctcagctgcagagagagacaaatggatcgagaac
ctgcagagagctgtcaagcccaacaaggacaacagccggagggtggacaatgtgctcaaa
ctgtggatcatcgaggcacgcgagctgccggccaagaagcgctactactgcgaactgtgt
ctggacgacatgctgtacgcacgcaccaccagcaagccccgcaccgacaccgtcttctgg
ggcgagcactttgagttcaacaacctgccagccgtccgcaacctacgccttcatctatac
aaggagacggacaagaagagacgcaaggagaagagcacttacttaggacttgtgagcatc
cccatctcaagcatcactggccgtcagtttgtggagcagtggtacccggtcatccagccc
agcgtcctcaccaagggagccggcggcggaggggggaagatcatcaacgcatccctacgc
ctcaaatcccgcttccagaccatgaacatcctgcctatggagctgtacaaggagtttgca
gagtacgtcaccaataactaccgcaccctgtgtgctgtgctggagcccgtgctgagtgtc
aagagcaaagaggaagtggcctgtgcgctggtgcatatactgcagagcacggggaaagct
aaggacttcctgtcagacatggcgatgtgcgaggtagacaggttcatagaccgagaacac
cttatcttcagagagaacactctggccaccaaagccatagaagagtacctcaaactgatt
ggacacaagtacctcaaagatgctataggggagttcataagggccttgtatgagtcagag
gaaaattgcgaagtggatcccatgagaacaccaccctcggtgctcgcagaccaccaagcc
aatctccgaatgtgctgtgaactagcactctgcaagatcgttaactccaattgtgttttc
cctcgagagctgaaggaggtctttgcctcctggagagtgcgctgtgctgagagaggtcgg
gaagacatcgccgaccgcctcatcagtggttccctcttcctgcgtttcctgtgtcctgcc
atcatgtccccgtcgctcttcaacctcacccaggagtatcccgacgagcagacctcacgc
acgctcaccctcatcgccaaaatagtgcaaaatctggccaatttctccaagtttggcact
aaagaggagtacatgtgttttatgaatgagttcttagagatggagtggggctccatgcag
cagttcctgtacgagatctccaacgtggacagcgtcagcaatgcaggcggctttgaggga
tacattgacctcggtagggagctgtccatactgcacagtctcctctgggaggtcatggct
cagctcagcaaggatgccatcatcaaactgggtcctttgccccgcctcctgaatgacatc
agtatggctctgcgtaatccccacctccagcggcagcccagccatcagacagacagggta
caggagagacaggcagacagactactgtcacggccgagcttcaacagaggcatctcttcc
gagtttcaaaacctcatgatgagggatcttaatagctctatagatatcactcgcttgcct
tcccctacctccacgggaggggtcatgccatcccgcaaccagttgagttttcaggaccgc
gaccacccccatcgagtgtcctccaaagaaatgttttacgtctcacgccctcccctggcc
cggtccagcccagcctactgcaccagcagctcggacatcacagaaccagaccctaaggat
tccccaatgaacagcgtgtctaacctgcagtcggtggaaatgctcaactcctcccaggcc
tccatcgccggcatgggcagcttcggcgggctgagcagcggaggcggtggcggcctgggg
tcgggcctgagcagccagctgcgggccggtgggcggttgtcagctggctctggcggctcc
agcatgtccggcggcctccggctgagccagctgagccagatgggcaccaccaccgactcg
ctatcccagcagcagcaacagcaggccgccgccatgcgctacccgctttccttccagaat
ccactctttcatctggcgaccgctgacgggcctcaacaccaacaacagcaccaaccacag
caccaccagcagcagcagcacagccgggcccagcccccagcaccactgctcctgacccca
gacgcagacccctcacaccagtcctacgtcccacagtttgcccacggtgggttctctcgc
agcgaggacctgtccaccctcaggaccagggacggtcacctgggccagcccagcatcatc
cactcgcacagctacagcgatgactacagcagggcggactatggacgcaggcagatgagc
atacacgtgcaggaaacccttcaacagcaacaacaacaactgatgggcatggtgtctcag
acgggcacctcccattcgtccctggccaccacgccccccaccacggtccaacccatgcgc
cagagctcagttgccccgcctcccgcccagcgtgtcaagtcccagacatcccaccagctg
tcggtcagtgcggccgctgcgcccgccgctccggctaagacgcgacctccgagcgggaac
ctgctcccgtcaccggagtccgggggctacggaggcaggcagcacgggaaccgacagctg
tccgtcaaagacaacaccgccccgggcctgccccaccagcagagctctgtcagggagaac
cagagtccacagggaaccaccaatcagagcacccaacagtcaccacagcaacaggcacag
caacaacaacaacaacaacagcacctgcttaaacccaccataggcaaacagggttcccag
tctccctctacccttaatcccaacccaaccccaaacgagcgaacagtggcctgggtctcc
aacatgccccatctgtcggctgacattgaaaggtcgcggatcgaccgtgaagaattcaaa
cttaaggagtactcgaagagcatggatgagtcacgcatggacagggtgaaggagtacgag
gaggagatcaactccctgaaggagcgcctgtccatgtcccacaagaagctggaggactac
gagcggcggctcctcacgcaggagcagcagaccaataagatcctgctgcagtaccagaac
cgcctggacgacagtgagaggaggctacagcgacagcaagtggagaaagactcccaaatt
aaaggaataattagcagactcatggctgtggaagatgagataaggggcccgcctgtgatt
gagccaaaaaccaggattttcgctgatcaggggaggcgtcagtccatcctagtgcagccc
cgtctcgcgcctgtcccaccccgagtgtccagccactcccacagcttcatggaggacaat
gtggaacgtaaatgggtgatgcaccatcgggccgcagggtggcatagccaaatgtccaga
gccctctctcgcgacgcgattggctga
DBGET
integrated database retrieval system
