Ammodytes marinus (lesser sand-eel): 307259929
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Entry
307259929 CDS
T12006
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
ammm
Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ammm04121
]
307259929 (wdtc1)
Ubiquitin system [BR:
ammm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
307259929 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
WD40_RFWD3
ANAPC4_WD40
Beta-prop_Aladin
PAC11
TPR_19
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
DSE1_N
ANAPC3
TPR_2
Beta-prop_SPT8
Beta-prop_HPS5
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
TPR_BSK1_C
TPR_1
Beta-prop_WDR19_1st
CFAP251_N
ASA1
TPR_17
RMD1-3
TRM82_WD
TPR_16
TPR_6
Barstar
CFAP70_TPR_C
TPR_9
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
307259929
NCBI-ProteinID:
XP_079896137
LinkDB
All DBs
Position
13:15193500..15201116
Genome browser
AA seq
674 aa
AA seq
DB search
MFCSQTMTAANITKDILHRQIRDKRASGFQRSYHVTDPFIKRLGLESELQGHTGCVNCLE
WNEKGDLLASGSDDQHAIIWDPFRHKKLTTMHTGHAANIFSVKFLPHSGDRILITGAADT
KVHVHDLTVKETIHMFSDHTNRVKRIAVAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEFCGQLVEAKCLAINPRDNNYMAVGANGPFVRLYDIRMIHDHRKSMNQSTSAAVHT
FCDRQKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQKPYTFLLPKRCQSSPGDVQNGKTTNGVANGIHLPTSHVHIAESKMHSSELPSH
LEKIKQEANDAFARQQWTQAIQLYSLGIHQASCNAMLYGNRAAAYMKRKWDGDHYDALKD
CLKALTLNPGHLKAHFRLARCLFELKYVAEALECLEDFKGKFPEQAHSSACDALDKDIKA
ALFTKTESAEDKKSNSSIRFNSFSRKESIPEDELVLRDRSFDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFVWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWNPRPETETENGRVVEDMDSAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPDGSD
EEDSSEGQVQCRPS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcagtcagacaatgactgcagccaacatcaccaaagacatcttgcacaggcag
ataagagacaaaagagcatcaggcttccaaaggtcctatcatgtgacggaccccttcatc
aaaagactcggactggagtctgagctgcagggccatactggctgtgtgaactgtttggaa
tggaacgaaaaaggagatttactggcctcgggctcagatgatcaacatgccatcatttgg
gatccattcagacacaagaagcttacaactatgcacacaggtcatgcagccaatatattc
tctgtaaagttcctcccacactccggggacagaatcttgataacaggcgcggccgataca
aaggtccacgtgcacgacctgacagtgaaggaaaccatccatatgttttctgatcacacc
aacagagtcaaacgcatcgccgtagcacccatgtggcccaacactttctggagtgctgca
gaggatggcatcatcagacaatatgacttgagggagagcagtaaacgctcggaagtgctg
atagacctaacagagttctgtggtcagctggtcgaggccaagtgtctggccatcaacccg
cgggacaacaactacatggcagtgggagccaacggtccattcgttcgtctctatgacatc
agaatgattcacgatcacaggaaatcaatgaaccagagcacatcagcagctgtgcacacg
ttctgtgacaggcagaagcccatccccgacggagccggccagtattatgttgcaggccac
ctgccagtgaaactcccggactacaataaccgcctgagggtcctggtggctacatatgtc
accttcagtccagatggcactgagctactagtcaacatgggtggggaacaggtgtatctg
ttcgacttgacattcaaacagaagccatacactttcttgctcccaaaaaggtgccagtca
tcaccaggagatgtacagaacgggaagacaaccaatggcgtcgccaatggaatccacttg
ccaaccagccatgttcatattgctgaaagcaagatgcactctagtgagctcccttctcac
ttggagaagataaagcaagaggctaatgatgcgtttgcccggcaacagtggacgcaggcc
atccagctgtacagtttaggtatccatcaggccagctgcaacgccatgctgtatgggaac
cgggctgcagcctacatgaaacgcaagtgggatggagaccattacgatgccctcaaggac
tgtctgaaggctctcactctaaaccctggtcatttgaaggctcacttcaggctggcacgg
tgtctgtttgagctgaagtatgtagctgaagctctggagtgtctggaagatttcaaagga
aagtttccagagcaggcgcacagtagtgcatgtgacgccttggataaagacatcaaggct
gctctcttcaccaagactgaatcagcagaggataagaagtccaacagctccattcgattc
aactcattcagtcgaaaagagtccatacctgaagatgagctggtgctgagagaccgcagc
tttgactacaagcacagatactgtggtcactgcaacaccaccactgatatcaaagaggcc
aacttctttggaagcaaaggccagtacattgtcagcggctcagacgacggctctttcttt
gtctgggaaaaggagaccactaacctggtgaggatcctgcagggggatgagtccatagtc
aactgcctacagccccacccaagctactgcttcctggctaccagtggtatagacccagtg
gttcggttatggaacccaagaccagagacagaaactgagaacgggcgagtagtggaggac
atggacagtgctgctcaggccaaccagcggcgtatgaacgctgatccgctggaggtcatg
ctgctcaacatgggctatcgcatcacaggcctgcgcggcgtcgggccagacggctcagac
gaagaagacagctcagagggacaagtgcagtgtcggcccagctaa
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