Ammodytes marinus (lesser sand-eel): 307260755
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Entry
307260755 CDS
T12006
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ammm Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ammm03021
]
307260755 (supt6h)
03036 Chromosome and associated proteins [BR:
ammm03036
]
307260755 (supt6h)
Transcription machinery [BR:
ammm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
307260755 (supt6h)
Chromosome and associated proteins [BR:
ammm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
307260755 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_9
HHH_3
SH2
Tex_N
Tex_YqgF
DUF7798
Motif
Other DBs
NCBI-GeneID:
307260755
NCBI-ProteinID:
XP_079897185
LinkDB
All DBs
Position
14:13238577..13255656
Genome browser
AA seq
1751 aa
AA seq
DB search
MSDFIESEAEESEEELDEKDLKPKKTQRFMEEEDEEEEENIEDQDERGNLRGLIDDGEEE
PEEEGAPKSGSASGSAAGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKK
YDRVKTLDDDEEDDDEKDLIADEIFHHGDGDGDLEEGEAVDEPLQHEEEEEGEGEEESDI
DDFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQD
EEGWDRPKKQIKRKKKSIFEIYEPSELESSHMTDQDNEIRTTDMPERFQLRSIPVKPAED
DELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQF
EVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQFEQISAD
PDKPLADGIRPLDTPDMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKSTKKRLKK
IKEVNEDGEEEEVEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGEN
LRDSYQRHETEQFPAEPVELAKDYVCSQFSTPETVLEGTRYMVAMQIAREPLVRHVLRQT
FQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELNGEQFLKMCLAEEEGLLSIDI
CIDLIGVKGFAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKEL
KSKLIAEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYADS
RDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKAFDIENLKKFLSGKKPHVVA
VAGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEADYRDYPPL
LRQAVSIARKIQDPLMEYAQVCSSDEDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEV
GVDVNKAIAHPHTQSLVQFVCGLGLRKGCQLLKILKQNNTRLENRTQLVTMCHMGPKVFI
NCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGAL
EEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVTYRVPNTEEV
FNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPEL
SEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMK
IDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTETEDQKQEEELKKKQQRTPYIKRV
IAHPNFHNISFNQAEKMMESLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKE
NAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKNFQEVQSKEKMEELLVRTK
REKPTFIPYFIAACKELPGKFILGYQPRGKPRVEYVTITPDGFRYRSQVFPTVNGLFRWF
KDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAVT
GQGQNPNTTPAQWGSSQYGYSGSTGGGGSSSAYHVFATPQQPIATPLMTPSYSYTTPSQQ
QALGTPQYPGSTPQSTHSHAHPHSSHVSHHSSSSHHAHHSSHHGGHSSGTPSSSTSSRGR
TPQQQPPKASGSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAG
DATPLLDEMDR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcattgagagcgaggctgaggaatccgaagaggagctggacgagaaagac
cttaagcctaaaaagacccagaggtttatggaggaagaagatgaagaggaagaagagaac
atagaagaccaggatgagcgaggaaatctccgtggactcattgatgatggagaggaggag
ccggaggaagaaggagctccaaagagtgggagtgcgagtgggagtgcagcggggagcgac
tcagaggaggaagtgaggcatcgacggaaaaagcgcaattatgacgactacctggatgac
gatgatcttgacctgattgaggaaaatttgggtgttaaagtgaaaagaaggaaaaagaaa
tatgaccgtgtgaaaacactggacgatgacgaagaagacgatgacgagaaggacttgatc
gcagacgagatctttcaccatggtgacggagatggagacctggaggaaggagaggctgtg
gacgagcctctgcaacatgaagaagaagaagaaggggaaggagaagaggagtcagatata
gacgattttattgtggatgacgatggccaacccatcaccaaaaagaggggcaagaagttc
tcaggatacaccgatgcagccctgcaagaggcccaggaaatcttcggtggcgactttgac
tttgcggactttgacgcagacgcttacgaccagggcgaggaggaggaagaggaccaggat
gaagagggttgggaccgacccaagaaacaaataaaaaggaaaaagaagagcatctttgag
atctacgagccaagtgagctggaaagtagtcacatgactgaccaggacaatgagatccgc
actacagacatgcccgagaggttccagttaagatccatccctgttaaacctgctgaggac
gatgagctggaagaggaagcagagtggatcttcagacatggcttctccactcttactatc
tccatgcaggagagcacagattatctggacagggggacaacgacaaacttcagcaggaaa
ggccccagcacaattgccaagatcaaagaggccctcaactttatgaggaatcaacagttt
gaggttccattcatagctttctacaggaaagagtatgtggagccagagctaaacatcaat
gacctgtggaaggtttggcagtgggatgaaaagtggactcagctgaagaccagaaagcag
aacctgacccgtctgtttcggaagatgcagtcctaccagtttgagcagatctcagccgac
cctgacaagcctttggctgacggcatccgtcctctggacacccctgacatggagaggctg
aaagacgtgcagactctcgaagagctgggcgatgtgtacaaccactttctgctctactat
ggtcgagacatccccaagatgcagaacgctgccaagtccaccaagaagaggctcaagaag
attaaagaagtgaatgaggatggtgaagaagaggaagtggaggtggaagaagaagaagaa
cagaaaggacctgatctcaagctggcgtctcgtagagacatgtacagcatatgtcagagc
gtaggacttgacggcttggctaaaaagtttggtttaactccagagcagtttggagaaaat
ttgagagacagttaccagcgtcacgagactgagcagttcccagccgagcctgtggagctg
gccaaagattatgtctgcagtcagttctccacgcctgagactgtgctggaaggaaccagg
tacatggtggccatgcagattgctcgtgagcctctggtcagacatgttcttcgacagacc
tttcaggaaagggccaagatcaacatcaagcctacgaagaagggcaaaaaggaggttgac
gaggctcatttcgcctactccttcaagtatcttaagaacaaggctgtaaaagagctgaat
ggggaacagttcttgaagatgtgcctggcagaggaagagggcctgctctccattgacatc
tgtatagaccttataggggtcaaaggatttgctggggaccagacgtactttgatgagatc
aaacagttctactacagggacgagttcagtcaccaggtgcaggagtggaacaggcagcga
accttggccatagagagagcactcactcagttcctctacccgcagatggccaaggagctc
aagagcaaactgatcgccgaggccaaagagagcattgtcaggtcgtgttgtcgtcggctg
tataactggctgaaggtggctccttacaggccagatcagcaggttgaggaagacgatgat
ctgatggatgagagtcagggcaaaggcattcgggtgcttggtgtagcgtatgcagatagc
agagacaccccagttttctgcgctttgatcaacggggaaggtgaggtggttgacttcttg
cgtctgccctactttatgaagcgaaggaacgccttcagggaggatgagagagagaagaag
gcctttgacatcgaaaatctcaagaagttcctgtcaggcaagaaacctcacgtggtagct
gtcgctggggaaaaccgagatgcccaaatgatcatggaggacatcaagaggactatcagc
gagcttgagcaagagtcttctctgcctgctgtgggagtggaacttgttgacaatgaactg
gccacattgtacatgaacagcaagaagtctgaggctgattatagggattaccctccgttg
ctgcgacaggctgtgtcgatagccagaaagatccaagatcctctgatggagtatgctcag
gtatgcagttcagatgaggatattctctgcctgaaactacacccactgcaggaacatgtg
gtgaaggaagatctgctctgtgctctgtactgtgaattcatcaaccgtgtcaatgaggtc
ggagtggatgtgaacaaagccatcgcccatcctcacactcagagcctggtccagtttgtc
tgtggcctgggactgaggaagggctgtcaactgcttaagattctgaagcaaaacaacacc
cgtctggaaaacagaacccagctggtcacaatgtgtcacatgggacccaaggtttttatc
aactgtgccggtttcatcaagatcgacacggcatcacttggggacagtactgactcctac
atcgaggttctggatggatctcgtgtccaccctgagacctacgagtgggctcgcaagatg
gctgtggacgcgctggagtatgatgagtcggcagaagatgccaacccagccggagccctg
gaggagatcctggaaaatccagaacgtctgaaagatctcgatttggatgcctttgctgaa
gagcttgagagacagggttacggtaacaagggaatcactctgtatgatatccgtgcagag
ctgagctgccggtacaaagacctgagagttacctacagagtccccaacactgaggaggtc
ttcaacttgctcaccaaggagactccagagaccttttatattggtaagctgatcaccagt
atagtgactggtatcgctcaccggcggcctcagggagagagttatgaccaggccattcgt
aacgattctacaggtctgtggcagtgtcccttctgccagcaggacaacttccctgaactc
agcgaggtgtggaatcactttgacagcggttcatgtccaggtcaggccataggggttcgg
tctaggttagataatggcgtccagggattcattcccaccaagtttctcagtgacaaagtg
gtcaaacatcccgaggagagggtcaaggtgggcatgacggttcactgccgcatcatgaaa
atcgacattgagaaattcagcgtggacctcacctgccgcacctcggatttgatggacaag
gccaatgagtggaaactcccgaaagacagctactacgactttgacacagagaccgaagac
caaaaacaggaggaggagctcaaaaagaaacaacagagaacaccatatataaagcgtgtg
atcgcccatccaaacttccacaatatcagtttcaaccaggcagagaagatgatggaatcc
ctggaccagggagacttgatcatcagacccagcagcaaaggagagaaccacctcactgtc
acttggaaagtggccgatggaatctaccagcatgtggacgtgagagaagaaggcaaagag
aacgcattcagcttgggccacactctctggatcaataatgaagagtttgaagatctggat
gaaatcaccgctcggtacattcagccaatggcgtcatttgcccgagatctactggggcat
aagaacttccaggaggtccaaagcaaggagaaaatggaggagttattggtcaggacgaag
agggagaagcctacttttattccatactttattgcagcatgtaaagaactgcctggaaaa
ttcatactgggttaccagcctcgaggaaaaccacgggttgagtatgtgactatcacccca
gatggcttccgctaccgctcgcaggtattccctacagtaaacggactgttccgttggttt
aaagaccattaccaagagcctgtgccaggaatcactcccagcaacagcagccgaaccagg
acacctgcatctctgaacgccaccccggccaatatcaacatcgccgacttgacgcgagct
gtcaatgccctcccacgcaacatgacctctcagatgttcaatgccatcgccgcagtcacg
ggccagggccagaaccccaacaccacccccgcgcagtggggctccagccagtacggctac
agcggcagcacaggaggaggagggagctcgtctgcttatcacgtatttgctacgcctcag
cagcccattgcgacgcccttgatgacgcccagctactcttataccacgcccagccagcag
caggccctgggcacgccgcagtaccccggctccaccccgcagtccacccactcccacgcc
cacccacacagcagccacgtgtctcaccacagcagcagcagccaccacgcgcatcacagc
agtcaccacgggggacactcgtctggcacgccgtcgtcctccacctcatccagaggacgc
acgccacaacagcagccgccaaaggccagcggcagcaacgcctctgccgtggactggggc
aagatggcggagcagtggctgaaggagaaggaggcggaggggcggaagaaagcccagagg
atgacgccgcgaccgtcgcccagtcccatgatcgagagcacgcccatgtctatcgctgga
gacgccacgccgctgctggatgaaatggaccgatag
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integrated database retrieval system
