Ammodytes marinus (lesser sand-eel): 307263283
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Entry
307263283 CDS
T12006
Symbol
LOC307263283
Name
(RefSeq) transcription factor Sox-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
ammm Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ammm03000
]
307263283 (LOC307263283)
Transcription factors [BR:
ammm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
307263283 (LOC307263283)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
307263283
NCBI-ProteinID:
XP_079900534
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All DBs
Position
16:complement(25906455..25910415)
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AA seq
483 aa
AA seq
DB search
MNLLDPYLKMTEEQEKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSDNHLLLGPDFK
KEGEEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSNKNKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNETEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQSESEDGEQTHISPTAIFKALQQADSPASSMGEVHSPGEHSGQSQGPPTPPTTPKT
DLPSSKADLKREGRPMQEGTSRQLNIDFGAVDIGELTGEVISNMGSFDVDEFDQYLPPHS
HAGLTATAQAGYTGSYGINSSSVNQVANAGAHGWMSKQQQQQQQQQQQHSMGGEQGQQGQ
QQRTTQIKTEQLSPSHYREQQGSPQHVTYGSFNLQHYSSASSYPSITRAQYDYSDHQGGS
TNAYYSHAAGQGSGLYSTFSYMSPSQRPMYTPIADTTGVPSVPPTHSPQHWEQQPIYTQL
SRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacagaagaacaggagaagtgtcactctgac
gctcccagccccagcatgtcggaggactccgcaggctcgccgtgcccgtccggctccggt
tcggacactgagaacacccggccgtccgacaaccacctcctcttaggcccagacttcaag
aaagagggcgaagaagaaaagttccccgtgtgtatcagagatgcggtttcccaggtgttg
aagggttacgactggacgctggtgcccatgcctgtgcgcgtcaacggctccaacaaaaat
aaaccccacgtcaaaagacccatgaacgcgttcatggtctgggctcaggctgcacggagg
aagcttgccgaccaatacccgcatctgcacaacgcggaactcagcaaaaccctcggcaaa
ctttggagattgctcaacgaaacagagaagcgcccgtttgtggaagaagcagagcgtttg
agagtgcagcacaagaaagatcatcccgactacaaatatcagccaaggcggagaaaatct
gttaagaacgggcaaagtgaatccgaggacggcgagcaaacccacatctctccaactgcg
atcttcaaggcgctgcagcaggccgattctccagcgtctagtatgggcgaggtgcattct
ccgggagagcattcaggtcagtcccagggccctccaacacctcccaccacccccaagaca
gacctcccctccagcaaagccgacctgaagcgtgaggggcgccccatgcaggagggcaca
agccgccagctcaacatcgactttggcgctgtggacattggcgagctgaccggggaagtc
atctccaacatggggagctttgacgtggacgagtttgaccagtacctgcccccacacagc
catgctgggctgaccgctacggcccaggctggctacaccggcagctacggcatcaacagc
tcgtctgtcaaccaagtggccaacgcaggggcccacggctggatgtccaagcagcagcag
cagcagcagcagcagcagcagcagcactctatgggaggagagcaaggccagcagggtcag
cagcagagaaccacccagatcaagacagagcagctgagccccagccactacagagagcag
cagggctccccgcagcacgtcacctacggctccttcaacctgcagcactacagcagcgcc
tcctcttacccctccatcaccagagcacagtatgactattcagaccaccagggcggtagc
accaacgcctactacagccacgcggccggccaaggctccggtctttactccaccttcagc
tacatgagccccagccagaggcccatgtacacccccatcgccgacaccacaggggtgccc
tctgtgccccccacccacagtccgcagcactgggagcagcagcccatttacacacagctc
tccaggccatga
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