Ammodytes marinus (lesser sand-eel): 307263887
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Entry
307263887 CDS
T12006
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
ammm Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ammm04131
]
307263887 (vps50)
Membrane trafficking [BR:
ammm04131
]
Protein recycling
Others
EARP complex
307263887 (vps50)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
307263887
NCBI-ProteinID:
XP_079901298
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All DBs
Position
17:complement(18843892..18971314)
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AA seq
968 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQELIDSIQEV
YFSNDSFDMVQHELEKLPPELPLQELEEYRDKLKRQQGAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKNFDVAHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLMDLCKALWEVMLSYHRTMQWHEEHDKPETTPTPDD
AAAAESDELSVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCSSKSEVLQESIKRQSGNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
TQLHEFKFMGQCRSPSMSPSRQAVSLSGGPAQDQLSLFQLYVQEGNPFEIHSEHKEEETE
DVLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVSRETIRSKKKSD
YNLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGR
NDMYESSGLGLISSRLRSTLNRIQENLIDMEAVGESTAVHGPGEDRKEKVPSPHLSQLVI
LTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASEL
RKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLGDVSRH
VRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRP
IPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAI
DDIDRPKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatcaagtctctcatggcccggcagggtctgaaaagcccccaggaaagcatg
gcagacctgagtccagtggagaacctgaggatccccagcaaggaggagttgcgggagctg
agggagcagcccatcgacccccaggcggagcaggagctcatcgacagcatccaggaagtc
tacttctccaacgactcctttgacatggtgcagcacgagctagagaaactcccacctgag
ctgcccctgcaggagctggaggagtacagagacaagctgaagagacaacagggggcagtt
tctaaaaaggtcgccgatctcatcctggagaaacagcctgcctatgtcaaggaactggag
cgagtgacggcgctacagaccaacctgcagctggcagcagtcatttgcactaatgcaagg
aggcaactgagcgtgtcgaaggagggattcaccgaggccagcctgggtctcctggccaat
cagaggagacgacagcttctgacaggcctgctcaagtctctgagaaccatcaagacgctg
caaagaacggatgtaagactcagcgagatgcttgaggaagaagactatccaggtgcgatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagc
gaactgaattccaaactacaagacactctggagcaaatagaggagcaactcgacgtggcc
ctgtcgaagacttgtaagaactttgatgttgcgcactacaccaaggtccagctggcgtac
acgctcctgggcaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacagtgtttcaagtggtgctgggatatgtggagctgtgtgcgggcaacgct
gacaccaagttccaaaagatgcagtacaaggacctgtgcacgcatatcaccctggacagc
tacatcccttgcctgatggacctgtgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcacgaagagcacgacaaaccagagaccacacccactccagatgac
gcggctgctgcagaatctgacgaactgtccgtggaccgtagctacgtaaagaagaagctg
gagcacggactgacaaggatctggcaggatgtccagttgaaggtgaaggcctacatcctg
gggacagacatgtctaacttcaaatacgacgatttcatagtggtactggatgtcatcagc
aggttgatgcaggtgggcgaggagttctgcagcagtaagtctgaggtcctgcaggagtcc
atcaaacgccagagtggaaactactttaaaaactatcacagggcacgactggaggagctg
aggatgtttctggagaacgagacgtgggaactgtgccctgtcaagtctaactttaacatc
acccagctccatgagttcaagttcatgggccagtgtcgttctccatccatgtcccccagc
agacaggctgtgtccctgagcggaggcccggctcaggatcagctgtctctcttccagctg
tatgtccaggaggggaacccctttgagatccacagtgagcacaaagaggaggagacagag
gacgtgctggcatctaacgggtacgagtcagacgagctggagaagagcgtgtaccaagat
tatgacagcgacagcgatgtccccgaggagctcaagcaggactacgttgacgaacagacg
ggcgacgcccctctcaagagtgtgtccagggagaccataagaagcaagaaaaagtcagac
tacaacctgaataaaaccaacgctccgatcctcaccaacaccaccctaaatgtcatccgg
cttgtagggaagtacatgcagatgatgaacattctgaagccgatcgccttcgacgtcatc
cactgcgtgtcacagctcttcgactactacctgtacgctgtgtacaccttctttggacgt
aatgacatgtatgagtcatcgggtctgggccttatcagcagcagactgagatccacactg
aaccggatccaggaaaacctcattgacatggaggcagtgggggagagcacagcagtccac
ggcccaggagaggacaggaaggagaaggtccccagcccccatctcagccaactggtgatc
ctcactaacagtggcacactctatgggctagcacagagggtggtggcaactgagtctctt
gtatttctggctgaacaatttgaatccctccagtcccacctggacacaatgatgcccgca
gccaagaagccattcctccagcagttttattcccagaccgtctctactgccagtgaactg
cgtaaacccatatactggattgttgcagccaaggccatcgactacgaacagatgttgctc
atgatggccggagtgaaatgggacatcagggagataatgtcgcagcataatgtatacgtg
gacgtcctgctaaaggagtttgagcagttcaacaagcgtctgggagatgtttccagacac
gtgcgcatcccgctgcctgtgtccaacgtcctgtgggagcactgcatccgtctggccaac
aggactctggttgaaggctatgccaacgtgaagaaatgcagcaacgagggccgggccctg
atgcagctggacttccaacagttcctcatgaagctggagaagctgaccgacctgcgaccc
atccccgataaggagtttgtggagacctacatcaaggcctattacctcaccgagaacgac
atggagcagtttatcaagaatcacagggagtactccatgaagcagctggccaacttggtg
aatgtttgcctgggctcgcacataaacaagaaggctcgtcagaaacttttggcagccatc
gacgacatcgacagacccaagagatag
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