Ammodytes marinus (lesser sand-eel): 307264258
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Entry
307264258 CDS
T12006
Symbol
gatad2b
Name
(RefSeq) transcriptional repressor p66-beta isoform 1
KO
K23194
transcriptional repressor p66
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
307264258 (gatad2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ammm03000
]
307264258 (gatad2b)
03036 Chromosome and associated proteins [BR:
ammm03036
]
307264258 (gatad2b)
Transcription factors [BR:
ammm03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
307264258 (gatad2b)
Chromosome and associated proteins [BR:
ammm03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
307264258 (gatad2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
Motif
Other DBs
NCBI-GeneID:
307264258
NCBI-ProteinID:
XP_079901731
LinkDB
All DBs
Position
17:21668869..21712450
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AA seq
663 aa
AA seq
DB search
MERMSEEALRLNLLKRGLESNNEREEALAKRLKMEGHEAMERLKMLALLKRKDLADLAAL
DMGGGLGDGKGPGASSLHHQSLMNAAYEEKLNGSLRLAGHGGHGGPKNGKENMMDEPVDM
SAGRRCEADHERRTPSPDVIILSDNEASSPRSSPRPEERLHHVNLDLFKGKSGEERQQMI
KALREELRLEEARLVLLKKLRQSQMQKENVVQKVPVVQNTASSVQQPSAMHSSPGLGKLP
VRPGLHSPEPQNLRTAQGHTVIRSAANANLPPMLMSQRVIAPNPSQLQGQRLSNKPGMSR
SSSSMANAVSYQQWMMCGSLQASQQVAASQRSGSSAMYMNLAHMQAAAAAAGAGGGHGGA
SAVSPSTMSSSASGGGGGVSSMADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFL
PSAANMEFIYMVGLEEVVQSVLDSQGKLRGSLSRMEPFFCAQCRTDFTPHWKQEKSGRIL
CEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSSAPTGPNASKTD
SMIRHHALRQAPQPQASMQRGLSNSARGVLSNFAQASQLSVASSLMGMTSSKHCGSGGGG
SSSNRMQHDSRRQIYNIPGLNIAYLNQAAVGAHKSSSLADRQREYLLDMIPPRSISQSIS
GQK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcatgtctgaggaggcgctgaggctcaacctgttgaagcgaggcttagaatca
aacaacgagagagaggaggctctggccaaacggctgaagatggagggccacgaggccatg
gagcgcctcaagatgctggcactgctcaaacgcaaggacctggccgacctagcggcgctg
gacatgggggggggcctgggagacgggaagggccccggagccagcagcctccaccaccag
agcctcatgaacgctgcctacgaggagaagctgaacgggagtcttcggctggcgggccac
ggcggacatggtggacccaagaatggcaaggagaacatgatggatgagccagtggatatg
agcgccgggagaagatgtgaggcagaccatgagagaagaaccccgtctccagacgtcatc
atcctgtcggacaacgaggcgtccagtcccagaagcagccctcgccccgaggagcgcctg
caccacgtcaacctggacctcttcaaggggaagagtggggaggagaggcagcagatgatc
aaagctctcagagaggagctgcgtctggaggaggctcgcctggtgctgctcaagaagctc
cggcagagtcagatgcagaaggagaacgtggtgcagaaggtcccggtggtccagaacact
gcgtcctctgtccagcagccctctgccatgcacagctctcctggcctggggaagctgccc
gtcaggcccggcctacacagccccgagccccagaacctccgcactgcacagggtcatacg
gtcatcaggtcagcagccaatgccaacctgcctcccatgctgatgtcccagcgggtgata
gcccccaacccctcccagctgcagggccagaggctctccaacaaacctggcatgtcccgc
tccagctccagtatggccaacgctgtcagctaccaacagtggatgatgtgtggctcccta
caggccagccagcaggtggccgcctcccagcgctctggctccagtgccatgtacatgaac
ctggcccacatgcaggcggcagcagcagcagccggggccggtggtggccatggcggagcc
tcggccgtcagtccctccaccatgtccagctcggccagcggaggaggagggggggtcagc
tccatggctgaccaggccagcagccaagctgcagccaagctggccctgaggaaacagctg
gagaagaccctgctggagatccctccacccaaaccccccgctcccctgctccacttcctg
ccctccgccgccaacatggagttcatctacatggtgggcctggaggaggtggtgcagagt
gtgctagacagtcagggtaaactgagaggatcgctgtcccgcatggagcccttcttctgt
gcccagtgcagaactgacttcaccccccactggaagcaggagaagagtgggcgcatcctg
tgtgagcagtgtatgacctccaatcagaagaaggctctgaaggctgagcacaccaacagg
ctgaagaacgccttcgtcaaggccctgcagcaggagcaggagattgaacagaggctgcag
cagcaggccgctctctctcccagctcggcccctaccggccccaacgcctccaagactgac
tccatgatccgccatcacgccctccgccaggctccacagccccaggcctccatgcagaga
ggtctgtctaactcagcgcggggggtgctgtctaacttcgcccaggcctcccagctgtcc
gtggccagcagcctcatgggcatgactagctccaagcactgtggcagcggaggagggggg
agcagcagcaatagaatgcagcacgacagccgccgccagatctacaacatcccagggtta
aacattgcctatctgaaccaagccgcagtgggcgcccataagagctccagcctagcagac
cggcagagagagtacctgttggacatgatcccacctcgatccatatcgcagtccatcagt
ggacagaaatga
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