Ammodytes marinus (lesser sand-eel): 307264758
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Entry
307264758 CDS
T12006
Symbol
LOC307264758
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ammm
Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ammm03019
]
307264758 (LOC307264758)
03041 Spliceosome [BR:
ammm03041
]
307264758 (LOC307264758)
Messenger RNA biogenesis [BR:
ammm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
307264758 (LOC307264758)
Spliceosome [BR:
ammm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
307264758 (LOC307264758)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Calcipressin
RRM_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
307264758
NCBI-ProteinID:
XP_079902377
LinkDB
All DBs
Position
18:complement(4951021..4961262)
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AA seq
400 aa
AA seq
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MDDDIPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDVSCPLQTAGHDPYCFVEFY
EHRHATATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAA
FAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK
PAPKTTNETTSTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQSMRQTFSPFGQIMEIRV
FPDKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTV
SFAAAQPYSQWGQAQWYGNTQQIGQYVPNGWQVPSYGVSYGQTWDQQGYNQLQHAAAAGA
GWTAGVGGVSNGGMVEPGQGVNGTVLTNQAGMGTAGYHTH
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgatatccccaaaaccctgtatgtggggaacctgtcccgggacgtgacagag
gccctcatcttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatgtttcttgtccactacagaccgcgggccatgatccgtactgctttgtggagttctat
gagcatagacatgccactgccacaatcgcagccatgaacggtcggaaaattctgggtaag
gaagtcaaggtcaactgggccaccacgccaaccagccaaaagaaagacacaagcagtcac
ttccatgtctttgttggagatctaagtcctgaaatcaccacagatgacataaaagctgct
tttgctccatttgggaaaatatcggattgtcgagtggtgaaagacatggccacaggtaaa
tctaaaggctatggctttgtctccttcttcaacaaatgggatgcagagaatgccatccag
cagatgggaggccagtggctgggagggaggcagatcaggaccaactgggccaccaggaag
cctgctcccaaaactaccaatgaaacaaccagtaccaagcagctatcttttgatgaggtg
gtcaaccagtccagccccagcaactgcaccgtgtactgcgggggcgtcaccacaggtctc
acagagcaaagtatgaggcagaccttctcacctttcggccaaataatggaaatacgtgtt
ttcccggacaaaggctactcgtttgtgaggttcaactcccatgaagcagcagctcatgcc
attgtttctgtcaacggtacatccatagagggctacgtcgttaagtgttattggggcaaa
gaaacaacagacatggtcagccccatccagcaggtacagatgccgcagcagaacacagtt
agctttgcggcggcgcagccctacagccagtggggccaggcccagtggtacggcaacacg
cagcagattggtcagtatgtgcccaatggatggcaggtgcccagctatggggtcagctat
ggacagacctgggatcagcagggctacaatcagttacagcacgctgccgctgccggtgcc
ggttggacagcaggtgtgggcggcgtaagcaacggaggcatggtggagcccgggcagggc
gtcaacgggacggtactgacaaaccaggccggcatgggcaccgctggctaccacacccac
tga
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