Ammodytes marinus (lesser sand-eel): 307265018
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Entry
307265018 CDS
T12006
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
ammm
Ammodytes marinus (lesser sand-eel)
Pathway
ammm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
307265018 (notch1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Notch
NOD
NODP
Ank_2
Ank
Ank_5
Ank_4
Ank_3
cEGF
EGF_3
EGF_DL_JAG
Gurken_M
Motif
Other DBs
NCBI-GeneID:
307265018
NCBI-ProteinID:
XP_079902714
LinkDB
All DBs
Position
18:complement(7336088..7360300)
Genome browser
AA seq
2389 aa
AA seq
DB search
MYRFFVKLTFLISAIVISQGLKCSLPTESCLNGGRCESTSNGNGECKCPSDYVGNRCQYP
SPCSPSPCRNSGECRAVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCDLI
SLTAYRCRCPPGWSGKSCQLANPCASNPCANGGQCSAFDSTFICTCPPAFHGQTCKQDVN
ECAQSPSPCLNGGVCVNEVGSFHCRCPQEYAGQHCETPYMPCSPSPCNNGGTCVQKGDTI
YDCSCLPGFNGQHCEHNIDDCPGHNCQNGGVCVDGVNTYNCQCPPHYTGQFCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECALGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCQNDATCLDQIGGFHCICMP
GYVGVFCHINADECASQPCLNNGKCIDKINSFQCECPKGFSGHLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYSGQHCETDVNECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENSYICSCLKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEAGYTGTMCNINIDECAINPCHNGGTCVDGINSFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLVNGYKCMCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
AGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAVCHNTMGGYQCKCQPGYT
GQKCETDTDDCKPNPCSNGGLCRDGINTFMCTCLPGFRGGRCEQDINECESNPCKNGANC
TDCVNSYTCTCPPGFNGINCEINTNDCTDSSCFNGGSCVDGINAFTCLCLPGFTGNYCQY
DINECDSRPCLNGGSCVDSYGTYKCTCPHGYQGVNCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQDQVDECSPNPCQNGAACTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSTDPLTNEPKCFNNGKCVDRIGGYQCVCPAGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGNLNCRNGGTCVSGHLGPRCLCPPTFTG
PECQTPTDSLCISNPCYNGGTCQITPDVPFFQCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIAPEQLKNRSSTFLRELSSVLHTNVVFRRDAKGEPIIFPYY
GNEQDLVKHNVLKRSADGWPEWTAMPANVLGQVKEGMSAMVSPRKRRELDPLQIKGSIVY
LEIDNRQCYQQSTECFQSATDVAAFLGALASSGNLNVPYIEAVTSVKPTPGSSELYPMYV
VFLGLAALGFICLGVLVSRKRRREHGQLWLPEGFKTTEPSKKKRREPLGEDSVGLRPMKI
SDINLMDDNQNEWDDEDPECRRFRFEEQAMLDLSDNTDHRKWTQQHMDAADLRTASIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGISEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQEE
TPIFLAAREGSFETAKVLLEHFANREITDHLDQLPRDIAQERMHHDIVRLLEEYNVVRSP
GLHNGPMSSSSLSPPLCSPNDYLSNLKPSLTSKKVRKVSAGKPGKDGGKDGRMKKKKSLD
GKGNLLDTSGVLSPVESLESPHGYLSDVASPPMTSPFQQSPPMSLNHLQGNGDSHMGQMN
MGKEMGCMTFDPHPPRLSHMPVSSPNSQGTTSMVGARGGQLDWVSRMHTGRQGGFHQGPT
MAHNMMGALHGVSTATLSHIMGYQNMQNSHLGMMQQAHSRQLQHQNSNSATVGQSLNQTF
PNHEMSGSDMQQNNGHSMSIHTVMPQETQILGAQFLTPPSQHSYNGPMDNTPNHQLQVPD
HPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSIHSQMNLIPDQFK
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactgacatttctgatatctgcgatcgtcatctcacaaggt
ctaaaatgctccctacccactgaatcctgtctgaatggaggaagatgtgaatccacctcc
aatggaaatggagaatgcaagtgtcccagtgattacgtaggcaaccggtgccagtatccg
agtccatgcagcccgtcgccgtgtcgcaacagtggcgagtgccgtgccgtttcccatggc
aacacgtttgatttccgctgcgtgtgccgcctgggtttcaccgaccggctatgcctgacc
cccaccaaccacgcctgcatgagctccccctgtcgcaacgggggaacctgtgacctcatc
agcctgactgcctaccgctgccgctgcccacctggctggtcaggtaaaagctgccagctc
gccaacccgtgtgcctccaatccctgtgccaacggtggccagtgctcggccttcgattcc
accttcatctgcacctgcccacccgccttccacggtcagacctgcaagcaagacgtcaac
gagtgcgcccagtctccctctccctgcctcaacggcggcgtgtgcgtgaacgaggtgggc
tccttccactgccgctgtcctcaggagtacgctggccaacactgcgagaccccctacatg
ccatgcagcccctcaccatgcaacaatggaggcacctgtgtgcagaaaggagacaccatc
tacgattgtagctgcctgccaggcttcaacggtcaacactgtgagcataacatcgatgac
tgtccgggccacaattgccagaacggtggagtgtgtgtggacggtgttaacacctacaat
tgccagtgcccacctcattacacaggtcaattctgcacagaaaatgtggacgagtgtgag
ttgatgcccaacgcgtgccagaatggaggtacgtgccacgacactcacggcagctaccac
tgcgtctgcgtcaacggttggactggtgacgactgcagcgaaaacatcgacgactgtgcc
agcgccgcctgttaccacggcgccacctgccacgaccgcgtagcctccttcttctgcgag
tgtccccacgggcgcacgggtttgctgtgtcaccttgatgacgcctgcatcagcaatccg
tgtcaaaagggttccaactgtgacaccaacccagtcaatgggaaagcaatctgcacctgc
ccacccggttacaccgggtcagcctgcaacctggacattgacgagtgcgcgcttggtgcc
aacccttgtgaacacggtggccgctgcctcaacaccaaaggctctttccagtgcaagtgt
ctccaaggatatgaaggaccacgttgcgagatggacgtcaacgagtgcatgtctaatcca
tgccaaaacgatgccacctgcctggaccagatcggagggttccactgcatctgcatgcca
ggatacgtgggtgtgttctgccacatcaacgcagacgaatgtgccagccagccttgtctc
aacaatggcaagtgcattgacaagatcaactcctttcagtgcgagtgccccaaaggtttt
tcggggcatctgtgtcaggtggacattgacgagtgtgccagcaccccctgcaagaacgga
gctaagtgtaccgatggtcccaacaagtacacctgcgaatgtgctgaaggttattcaggg
cagcactgtgagactgacgttaacgagtgctactccgacccctgccactatggcacctgt
aaggatggcctggcctcattcacctgctactgtcgccccggctacactggccgcctgtgc
gagaccaacatcaatgagtgtctgagccagccctgcaagaacggtggcacttgtcaggac
agggagaactcgtatatttgctcctgtctcaaaggcactgcaggtttcaattgtgaggtg
aatctggacgactgcaagagcaaaccctgcgactatgggaggtgcatcgacaaaatcaac
ggctacgagtgtgcctgtgaggccggctacacaggaacaatgtgtaacatcaacatcgat
gagtgcgccatcaacccctgtcacaacgggggcacatgcgtggatggcatcaacagcttc
acctgcctgtgtccggagggctacaacgacgccacctgtctatctcaggtggacgagtgt
ggcagcaacccatgcatccacggccgatgccaggacctcgtcaatggttacaagtgtatg
tgtgactctggctggagcggcccaaactgcgacatcaataacaacgagtgcgagtccaac
ccgtgcatgaatgggggaacctgcaaggacatgaccagcggataccactgcacatgcaga
gccggcttcactggacctaactgccaaactaacatcaacgagtgtgcctccaacccatgc
ctcaaccagggcacctgcatcgatgacgtggccggatacaagtgcaactgtttgctgccc
tacaccggtgaaaactgtgagaccctgctggccccctgcagccccagaccctgtaaaaac
ggtggagtatgtaaggaggccgaagactaccagagcttctcctgcatctgccccgaggga
tggcaaggtcaaacatgtgagattgacatcaacgaatgtgtgaagagcccatgccgcaac
ggtgctgtttgccataacacaatgggtggctaccagtgcaagtgccagccaggttacacc
ggccagaagtgtgagacggacactgatgactgcaaaccaaatccctgcagtaacgggggt
ctgtgccgcgatggcatcaacactttcatgtgtacctgtctgccggggttccgtggcggc
agatgtgagcaggacataaacgagtgtgagagtaacccctgtaagaatggcgccaactgc
accgactgtgtcaacagctacacctgcacctgtccgccgggcttcaacggcatcaactgt
gagattaataccaacgactgcaccgacagctcttgcttcaacggtggcagctgtgtggat
gggatcaatgcgttcacctgcctgtgtctacctggattcactggcaactactgccaatat
gacatcaatgagtgtgactccagaccgtgcctcaatggaggctcttgtgtcgacagctat
ggaacatacaagtgcacctgtcctcacggctaccagggagtcaactgccagaatcttgtg
cgttggtgtgattcatccccatgtaaaaatggcgggtcgtgctggcagcagggagcttct
tacacctgccagtgtcagactggatggactggtctctattgtgacatcccaagtgtgtcc
tgtgaggtcgccgccaagcagcaaggggtggaggtggctcacctgtgcagaaactctggc
cagtgtctggatgctggaaacacacattactgccgctgccaggccggctacactgggagt
tactgccaggaccaagtggacgagtgctcacccaacccctgtcagaatggagccgcctgt
accgattatctgggaggatacagttgtgagtgtgttcccggctaccatggtgtgaactgc
tccaaagagatcaacgaatgccagtcacagccctgtcagaatggaggcacctgcatcgac
ctcataaacacatacaaatgctcctgtcccagaggaacacaaggcgtccactgtgagata
aatttggacgactgcaccccctccactgacccactgaccaacgagcccaagtgcttcaac
aatggcaagtgtgtggaccgcatcggaggttaccagtgtgtgtgtccggcaggctatgtg
ggcgaacgctgcgaaggcgacgtcaacgagtgtttgtcagacccctgtgaccccagaggc
tcctacaactgcattcaactcaccaacagctaccgttgtgaatgccgcactggatacaca
ggtcagcggtgtgacaaggtgtttgacggctgcaaaggacgaccctgcaggaacggagga
acgtgcgcagttgccagtaacacacctcacggtttcatctgcaaatgtccacctggcttc
accggctcttcttgtgagtacgattctcgttcctgcgggaatctgaattgcagaaacgga
ggcacatgcgtgtcgggccacctgggcccgcgctgcctgtgtccgcccaccttcaccggg
cctgagtgccagacgcccaccgacagcctctgcatctccaacccctgctacaacggcggc
acgtgccagatcaccccagacgtgcctttcttccagtgcagctgccccagcaacttcaac
ggtctgctgtgccacatcctggactactccttcgtcgggggtttcgggcgtgacatcacc
ccgccgcctgaagtggaggtgagctgcgagatccctcagtgtgacgagtgggccgggaac
catatctgcgactcgctgtgcaacaaccacgcctgtggctgggacggaggagactgctcg
cttaacttcgacgatccgtggcaaaactgctccgcggccttgcagtgctggcgctatttc
aatgatgggaagtgcgacggccagtgcaacagccccgggtgtctgtacgatggctttgat
tgtcagggacaggaagggcaatgcaacccgctgtatgaccagtactgtaaagaccactat
gcagatggtcactgtgatcagggctgcaacaacgccgagtgcgagtgggacggcctggac
tgtgccaacaacatgccggagaagctggcagacggccacctagtcctggtggtccacatt
gccccggagcagctgaagaatcgctcctcgaccttcctcagagagctcagcagcgttctc
cacaccaacgtggtgttccgccgcgacgccaaaggagaaccaatcatcttcccttactac
ggcaacgaacaggacctggtcaaacacaacgtgctgaagcgctcggcagacggctggccc
gagtggactgccatgccggccaacgtcctgggtcaagtgaaggaaggcatgtcggccatg
gtcagccctcgaaaacgcagggagttggatcctttgcaaatcaaagggtctattgtgtac
ctggagattgacaaccgtcagtgttaccagcagtctaccgaatgcttccagagcgccact
gatgtcgctgcatttcttggagcgctggcctccagtggcaatctcaacgttccctacatt
gaagctgtcaccagtgtgaaacctactcctggcagttcagagctctaccccatgtacgtg
gtcttcctgggcttagccgctctgggtttcatctgcctgggagtcctggtgtcccgtaag
aggcggcgagagcacggccagctctggttacctgagggattcaaaacgaccgagcccagc
aaaaagaaacgcagagagccactgggagaggattctgttggactgaggcctatgaaaatc
tccgacatcaacctcatggatgacaatcaaaatgaatgggacgatgaggatccagaatgc
aggcgcttcaggtttgaggaacaggccatgttggatttgagtgacaacaccgaccacagg
aaatggacacagcagcatatggatgcggccgacctgcgtaccgcgtccattgcccctacc
cctcctcagggagagatagagaatgactgcatggatgtcaatgtcagaggaccagatggc
ttcactcccttaatgatcgcgtcctgcagtggcggaggacttgagactggtatcagtgag
gaggaagaggatccctccgcagaaatcatctctgacttcatctaccagggagccaacctc
cacaaccagacggaccgcacaggggagacggcccttcacctggccgctcgctacgcccgc
tctgacgccgccaaacgcctgctggagtccagcgccgacgccaacgtgcaggacaacatg
ggccgcacgccacttcacgctgccgtggccgcagacgcacagggagtgttccaggaagag
acaccgatctttctcgcagcccgtgaaggcagcttcgagacagccaaggttctcctggag
cactttgccaaccgcgagatcaccgaccacctggaccagctgcccagggacatcgcccag
gaacgcatgcaccatgacattgtgcgcctcctggaagagtacaacgtggtcaggagcccc
gggcttcacaacgggcccatgagcagctccagcctctcccctcctctctgctcccccaac
gactacctgagcaacctcaagcccagcctgacctccaagaaggtccgcaaagtaagcgcc
ggcaagccagggaaggatgggggcaaggacggcaggatgaagaagaaaaagtcactggac
gggaagggtaacctgctagacacgtcgggcgtcctctccccggtggaatccctggagtcg
ccacacggctatctctctgacgtggcctctcctcccatgacctcgcctttccagcaatcc
ccgcccatgtctctaaatcacctgcaaggcaacggagactcccacatgggacagatgaac
atgggtaaggagatgggctgtatgacctttgatccgcacccaccccgtctctcccacatg
cccgtgtccagccccaacagccagggcacgacgtccatggtgggggccagaggaggccag
ctcgactgggtctccaggatgcacacaggccggcaaggaggcttccaccaggggcccacc
atggctcacaacatgatgggcgctctgcacggtgtcagcaccgccacgctgtctcacatc
atgggctaccagaacatgcagaacagccacctgggtatgatgcagcaggctcactcacgg
cagctccagcatcagaattccaactcagccactgttggacagtcgctcaaccagaccttc
cccaaccacgagatgagcggttcagacatgcagcagaacaacggccactccatgtccatc
cacacagtaatgccccaggagacgcagatcctgggcgcccagttcctcacccctccctcc
cagcacagctacaatggccctatggacaacacgcccaaccaccagctacaggtgcccgac
cacccgttcctaaccccctcccccggatcccccgaccaatggtcaagctcgtccccacat
tccaacatgtccgattggtcggaaggcatctccagcccgcccacgagtatccattcacag
atgaatctgatcccagaccagtttaagtag
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integrated database retrieval system
