Ammodytes marinus (lesser sand-eel): 307266375
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Entry
307266375 CDS
T12006
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b isoform 1
KO
K06091
MAGUK p55 subfamily member 5
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm04519
Cadherin signaling
ammm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
307266375 (pals1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
307266375 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ammm04990
]
307266375 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
ammm04990
]
PDZ domain-containing proteins
MAGUK family proteins
307266375 (pals1b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
PDZ_6
SH3_2
SH3_1
L27
PDZ_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
307266375
NCBI-ProteinID:
XP_079904500
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Position
19:complement(9717410..9744956)
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AA seq
653 aa
AA seq
DB search
MITSHMNGFVQEASGQAKSHRERAVDCPGDESSLVKAPHSGSSAQMERIQHYQEELRKRR
EEEGGRGKHDIDPNASLRLKKLSQNPKVGIDNPTFDSKEKPTKDALTLDPLADLEEWLTA
LKWAQHCLTDAQSQQDVELTMQLLSKEDFRNAFTIYSAVSLQRSKVSPNSPLTAQAEDLC
LEVQKILQSSQQKEGLELKALLTNPQFQALMQAHDCVAGQEMPEENVTQYVGETVKLVRL
EKARDTPLGATVRNDMDSVVVSRVVKGGAAESSGLLSEGDEILEINGVSIRGKHVNEVHD
LLQQMHGTLTFLLIPSSQIKPAPHRQTVMHVRAYFDYDPSDDPFVPCRELGLSFQKGDIL
HVISQDDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQRETLKKTITDRTREQQGKIWSAKK
NKKQRKKNATVFSKTTDLEDILTYEEMSLYHQPANRKRPIALIGPTNSGHDELRRRLLSI
EPEKFAVAVPHTTRTSRIHERNGREYHFVSRPAFEADLGTGKYIESGEYGKNLYGTSTDS
VRHVINSGRICMLSLHTRSLQVLRSSNLKPYVIFIAPPSQERLRTLLATEGKTPKPEELK
EVIEKAREMEHNFGHFFDATIVNMDPEPAFYELRRLIEKLDTEPQWVPTSWLC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcccatatgaacggctttgtgcaagaggcctccggtcaggccaagagccac
agggagagagcagtggactgtcccggagacgagagcagcctggtcaaagccccacacagc
ggcagcagcgcccaaatggagaggatccaacactaccaggaggagctaaggaagaggagg
gaggaggagggaggaagaggcaagcacgacatagaccccaacgcttcactacggctcaag
aagctgtcacagaatcccaaggtgggcatcgacaaccccaccttcgacagcaaggaaaag
cccactaaggacgccttgaccctggatcctctagctgacctggaggagtggctgacggcc
ctgaagtgggctcagcactgcctgactgatgcacagagccagcaggatgtggagctgacc
atgcagctgctcagcaaggaggacttcaggaatgccttcactatctacagcgctgtgtcc
ctgcagaggagcaaagtcagccccaactcccccctcacagcacaagcagaggacctctgc
ctggaggttcagaagattctccagtccagccaacagaaggaaggactggagctcaaagct
ctgctcaccaatcctcaattccaggcactgatgcaggcccacgactgtgtggcggggcaa
gagatgccagaggaaaatgtgacccagtacgtcggagagacggttaagctggtgcggctg
gagaaggcccgcgacactccactgggtgcgacggtccgtaacgacatggacagcgtggtg
gtgagtcgggtggtgaaaggcggagcagcagagagcagcggcctgctcagtgagggagac
gagatcctggagatcaacggagtctctatacgggggaaacacgtcaatgaagtccacgac
ttgctgcaacaaatgcatggcactctgaccttcctcctcatcccgagctctcagattaaa
cctgcccctcacagacagactgtgatgcacgtacgggcttactttgactatgacccttct
gatgatccctttgtgccgtgtcgtgagctgggcctgtccttccagaagggagacatcctc
cacgtcatcagccaggatgaccccaactggtggcaggcctacagggacggagacgaggac
aaccagcccctggcaggactcattccagggaaaagcttccagcaacagagagagaccttg
aagaaaaccataacagacaggactcgagagcaacaagggaagatttggtcagcaaagaaa
aacaagaaacagcgaaagaagaacgcaactgtcttcagcaaaactaccgacttggaagac
atcctgacctatgaggagatgtcgctctatcatcagccggccaatagaaaacgccccatc
gctctgattggtcccacaaacagcggccacgacgagctgcgccggaggcttctgtccatc
gagccagaaaagtttgccgttgctgttccacacacaaccagaacctcgaggatacatgag
cggaatggtcgtgagtatcactttgtgagccggccggcctttgaagctgacctggggaca
gggaagtacatagagtcaggggaatacggcaagaacttatacggcaccagcaccgactca
gtacgacacgtcatcaactcaggacgcatctgtatgctcagcctccacaccaggtcactt
caggtattaaggtcttccaacctcaagccttatgtcatcttcatcgctcctccttcccaa
gaacgactacgcaccctgctggccacagaagggaaaaccccaaagcccgaagagctaaag
gaggttattgaaaaggccagggagatggagcacaatttcggacacttcttcgacgccacc
atcgtgaacatggatccggagccggctttctacgagctgcgcaggctgatagagaagctg
gacactgagccacagtgggtgcccacctcctggctctgctag
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