Ammodytes marinus (lesser sand-eel): 307266604
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Entry
307266604 CDS
T12006
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm04514
Cell adhesion molecule (CAM) interaction
ammm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
307266604 (lrrc4bb)
04517 IgSF CAM signaling
307266604 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ammm04515
]
307266604 (lrrc4bb)
Cell adhesion molecules [BR:
ammm04515
]
Immunoglobulin superfamily
NGL family
307266604 (lrrc4bb)
SSDB
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
LRR_NXF1-5
DUF7617
Motif
Other DBs
NCBI-GeneID:
307266604
NCBI-ProteinID:
XP_079904791
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All DBs
Position
20:complement(<12524289..>12526639)
Genome browser
AA seq
744 aa
AA seq
DB search
MRVVMVTSPCSPSPLLWLVQLLLWFHNHGPQLTEAAPPCPSLCTCSNQASRVICTRKSLD
QVPESISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGIKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNAYSYFTTVTVETVETVRGDEKNSARQYINETFIDFPNP
TGQRGVLEGRPGITISPSLSSLSSLSPRANRATENAVTVSIMGVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGSGGEGTLRRHHSEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGSDMMGPGGNYNN
KNHQDIPISCTSVPISTANMLTSSGNGNNINPCSMSPPLPMSLPMPTMGLHGSIKGFMGH
NQNPQMEPLLFKGNSKENVQETQI
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgttccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggacctcagctgacagaggcagcacccccctgccct
agcctctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaaaagtttagat
caagtcccagaaagtatttcagagaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacatttaaacacctgcgacatttggaaatcctccagctctcc
aagaatcacatacggcaaattgaggtgggtgctttcaatggccttcccaacctcaacaca
ctggagctgtttgacaaccgtctcacagtggtgccgtcacaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaaccccatcgagacactgccggcatttgccttt
catcgcgttccctctctacgccgacttgatctaggggaactcagaaagctggatttcatc
tcagaggctgcctttgaaggtctggtcaacttgcgattcttgaatcttggcatgtgcggc
ttaaaggacatccctaacctcaccccactagtacgactggaggagttggagctgtcaggt
aaccagctggggatagtcagacctggatccttccagggcctagtgtcacttcgcaagctg
tggctaatgcactccagagtgtcagtcattgaacgcaatgcttttgatgacctaaaaaac
ttggaggagcttaacctctcccacaattccctgcattccctgccccatgacctcttcacc
ccgttgcaccagctggagagggttcatctcaatcacaacccttgggtgtgcaactgtgat
gtactgtggctcagctggtggcttaaagagaccgttcccagcaacaccacatgttgtgct
cgctgccatgcgcccccaggtataaagggcaggtatattggggaactagaccagagccac
tttacctgctatgccccggttattgttgagccacccactgacctaaatgtcactgagggc
atggctgctgagctgaaatgccgtactggaacctcgatgacctccgtgaattggttcact
ccaaacggcactctgatgacccacggatcatatcgagttaggatctcagtgcttcatgac
ggaacactcaacttcacaaatgtgaccgtgcaagacactgggcaatacacttgcatggtt
accaactctgctggaaacaccactgcaaccgccgtgctcaatgtgtctgcgtcagacccc
agcaacgcttacagctatttcaccactgtcactgtggaaacagtggagacagtgagagga
gacgaaaaaaattccgcaagacaatatattaacgagactttcatagatttccctaatccg
actggtcaaagaggggtgttagaaggcagacccggcatcactatatcaccttctctctcc
tctctttcctcactatccccacgagccaacagagctactgaaaatgcagtgactgtgtcg
ataatgggtgtaactaacataccaggccttgatgatgtaatgaaaactactaagatcatc
attggttgcttcgtggccattaccttcatggccgctgtaatgttggtggtcttctataaa
ctccggaagcagcaccagctacacaagcaccacggccctgccagagcaattgaaattgtc
aatgtagaagatgagatcggagctggggccgggagtggtatctcaggtggttcaacaatg
aattctggtagcggtggagaaggaaccctaaggagacatcattcagaaatagtcaacctt
cccaacattggccgtacagataccctcaaccattactacaagacccatcatttcaacaac
aacgtgatgggtctcagtattggaagcgatatgatgggacctggagggaactacaataac
aagaaccaccaagatatccccatatcctgtacctccgtcccaatctctacagctaatatg
ctcacctcgtctggcaatggcaataacatcaacccctgttctatgtccccaccactgccg
atgtctctccctatgcctaccatgggcttacatggatcgatcaagggtttcatgggccac
aaccagaatccccaaatggagcctcttctcttcaaggggaactcgaaggaaaacgtccaa
gagactcagatctaa
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