Ammodytes marinus (lesser sand-eel): 307267804
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Entry
307267804 CDS
T12006
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
307267804 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ammm01002
]
307267804 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ammm00536
]
307267804 (shha)
Peptidases and inhibitors [BR:
ammm01002
]
Cysteine peptidases
Family C46: hedgehog family
307267804 (shha)
Glycosaminoglycan binding proteins [BR:
ammm00536
]
Heparan sulfate / Heparin
Morphogens
307267804 (shha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
DrmE_C
Peptidase_M15_3
Intein_splicing
Vint
VldE
Hint_2
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
307267804
NCBI-ProteinID:
XP_079906333
LinkDB
All DBs
Position
21:complement(<17336503..>17343885)
Genome browser
AA seq
415 aa
AA seq
DB search
MLLWTRIVLAGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKAVKDLQTGDRVLAADDEGKPIYTDFIM
FIDRDSTTRRLYYVIETDSGQKITLTAAHLLFVGGHNATDEQRMSAVFASQVQPGQKVFV
FDGVRSRLETANVKRIYTQEHEGSFAPLTVQGTLVVDRVLASCYAVIEDHDLAHWSLAPV
RLAHWVSTSLFSSQQRQVSAQNDGVHWYSKILYQLGTWLLDRHSIHPLGMSVYPS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgttttggccggtctcatctgcttatccttggtgtcctct
gggatggggtgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacactggtgccgaccggctaatgactcag
agatgtaaagacaagctgaactctctggctatctcagtgatgaaccagtggcccggggtg
aagctgcgggtcaccgagggctgggacgaggacggacaccacttcgaggagtcgctccac
tacgagggccgggccgtggacatcaccacctcggatagagacaagagcaaatacggcact
ctgtccagactggcggtggaagccgggttcgactgggtctattacgaatccaaagcccac
atccactgctctgtcaaagcagaaaactcagtggcagcaaagtctggcggctgcttccca
ggctcctccactgtaacccttcaggatggcaccaagaaggcggtcaaagacctccaaact
ggcgacagggtcctggctgcggacgacgaaggaaagccgatttacacggacttcatcatg
ttcatagaccgagactcgacgaccaggaggctctactacgtaatcgaaaccgactcgggc
cagaaaatcaccctgaccgccgcgcacctcctctttgtcggcggacacaacgccacggac
gagcagcggatgtcggcggtgttcgccagccaagtccaacctgggcaaaaggtgttcgtg
ttcgacggcgtgagaagtcgactggagaccgcgaacgtaaaacggatttacacgcaagag
cacgaaggctcctttgcaccgctgaccgtgcaggggaccttggtggtggaccgggtcctt
gcgtcctgttacgcagtgatcgaagaccacgacctggcgcactggagcttggcacctgtc
aggctcgcccactgggtgtccacgtcgcttttcagttcccagcagcgtcaagtcagtgcg
cagaacgacggagtgcactggtactccaagatcctttatcaattaggaacatggctcttg
gacaggcactcgatccatccacttgggatgtcagtatacccaagttga
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