Ammodytes marinus (lesser sand-eel): 307268636
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Entry
307268636 CDS
T12006
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
307268636 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ammm03000
]
307268636 (arid2)
03021 Transcription machinery [BR:
ammm03021
]
307268636 (arid2)
03036 Chromosome and associated proteins [BR:
ammm03036
]
307268636 (arid2)
Transcription factors [BR:
ammm03000
]
Eukaryotic type
Helix-turn-helix
ARID
307268636 (arid2)
Transcription machinery [BR:
ammm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
307268636 (arid2)
Chromosome and associated proteins [BR:
ammm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
307268636 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Pox_D5
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
307268636
NCBI-ProteinID:
XP_079907474
LinkDB
All DBs
Position
22:18828625..18862174
Genome browser
AA seq
1612 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSPFKKIPFVGGKELDLNALYIRVVALGGF
AKVSDKNQWIELGEEFNLPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDEETQPGNPKN
ALPIGAIPTTYNYQQHIVSDYLRQSYGLSTDFVPPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHAMQLEKDPKLVTLLLAHAGVFDDTLGSFSAVFGTEWKAKSSRDFVRFWKEV
VEDTEVRELIWDKNSPAQGTSCEERWPSLFHPPRNAGIKDMEAQRVLQVAVILRNLSFEE
ANVKLLAANRTCLRFLLLSAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTIT
KCLMSRDRFLKMRAMEILGNLSKAEDNGVLICEYVDQDSYREVIMLLTLPDLMLLMASLE
VLYLLAQLGEIPCTKIATVDHSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANAEQAAEV
RPQLVEQVPAATQGAPAPVTRVPVQSAQPPPGIVELDGEKFILQWLNAHFETNPEGTVSR
SEVYSEYLSTCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQEETKTNGQVHILLVGLRRR
AIPLPIQLYYQQQNQAAAQTLPPARHEAPGDPQATLPGLPPGHLALGSQMVNAGHSTVSR
HPAPQQVSPQLAPNPLAAAAVQQQQVRPGPVVQIPTSALAIQNLSPQGPSAQQQQQHSPM
LPMGTPVTLFQQVVPQGHILTARVQGVCPPIAQHPGLSQTSPQGEPPSTASSIQVGVGQA
LNIGTVPNTQGSRVSFQNIAPKPAATIATPNQQAQPQQQSVVMLSPNPQQSQSYNPAIHQ
IVLTNPGAQTIQIAGQAGASSCPPPAPHSNTQAHSSQTVSHALAMKRQQQHQQLQIISQA
PPSQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPLPNSTLSPSPQVIYQTNYSTQN
PSPQPQQLNVQLVQGQPSAAGGPALQTVQILPGQLISTSSSGAATLIQGPATAGQVTFTV
VPNTGFTTSTAAVAASQGAVAPGVPPPLFSTGTVPHHAPATPPPPPAPLRGDKIICQKEE
EAKDATGLHVHERKIEVMENSSMGDGDSNSKTSNGGVAAGAKLLNGRKCMESNLPPYHSG
NSQGVLNGPATESHPANGKQALSPGLEGNPDPKKTLVNGVCDFDRGDGTFNKNIPNHIAS
KQYLGNGAVGPAEKSHGSDLSSPQQDPAKAQQAEQRLVNGPQAAGNRPPSELTNGPLGLA
HAVPVLRQQLLPNSPLLSTVTLTSQSPAASAANGLASEPRGLKRPAESEDRSAASSGIPN
KVGVRIITISDPNNAGSSSTMVAVPAGTDPSTVAKVAIENATQQRNCLPTQAAGSTPTGT
PSPPPLSQHAPAGNHSPQLPAQQSAAAPPEQSRKAGQNFKCLWQSCKRWFETPSQVFYHA
ATQHGGKGVYGGHCQWEGCEPFPRQRLSFVTHLQDKHCSRDALLAGLKLEEKQALSPNQT
SSQTPPAAGSSSPAPRAPKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPVTKHIRLTA
ALTLKNIAKHSDCGRMLVKRHETHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctactagatcagcgaaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccaaagcagaggatcgccgttcaagaagattcctttcgtg
ggtgggaaagagctggacctaaatgctctctatatcagagtcgtcgctttaggtggattt
gctaaggtctctgacaaaaaccaatggattgaacttggagaagagttcaacctcccgagg
agttgctccaacgctgcatttgctttaaaacagtactaccttcgatacctggagaagtat
gagaaagtccaccactttggcgaggacgatgaggaaacgcagccggggaatcccaaaaac
gctcttccaatcggtgcaattcccaccacatacaactaccagcaacacatcgtatcagac
tatctccgccaaagctatggactgtcaacggattttgttccgccgtgcgactacaacaaa
ctggtgctgtctctcctgtcgggcctgcccaacgaggtggactttgccgtcaacgtttgc
actctgctgtccaacgagagcaagcacgccatgcagctggagaaggaccccaagctggtc
accctgcttctggcccacgccggcgtctttgacgacacactaggcagcttctcggcggtt
ttcgggacggaatggaaggcgaaatcctcgcgggactttgtcaggttctggaaagaggtg
gtggaggacactgaagtcagggagctgatctgggacaagaacagcccagcacaaggtacg
tcgtgtgaggagcgctggccgagcctcttccacccgccgcggaacgccggcatcaaagac
atggaggcgcagcgggtgctgcaggtggccgttatcctgcggaacctctccttcgaggag
gccaacgtcaagctgctggcggccaaccgaacgtgcctgcgcttcctcctgctctctgcc
cactgtaacctcatctcactccgacagctcgggctggacacgctgggcaacgtggctgct
gagctccagctggatcccgttgactttcggacgactcatctgatctttcacaccatcacc
aaatgcttgatgtccagggacaggtttctcaaaatgagagccatggaaatcctgggcaac
ctcagcaaggcggaggacaacggcgtgctgatctgtgagtacgtggaccaggactcgtac
agggaggtgatcatgctcctcaccctgcccgacctcatgctcctcatggcctctctggag
gtgctctacctgctggcccagctgggagagatcccctgcaccaagatcgccaccgtcgac
cacagcatagacttgttagtgcggttggtgtctgtggacctccacacgtttggccctgac
gccctgacagcggtgcggttgatcgagcaccaggccaacgccgagcaggccgcagaggtt
cgaccgcagctggtggagcaggtgcctgcagccacgcagggagcgccagcacccgtaaca
agggtcccagttcaatcggctcaaccaccacctggtatcgttgaactcgacggggaaaag
tttatactgcagtggctcaacgcacactttgagacaaaccccgagggcacagtgtctcgg
tcagaggtgtattcagagtacctgtccacgtgcagtaaaatgggacgaagcaacatcttg
aactccaccggcttcctcaaatgtctgcggactgtgtttcccaaccacacgatgcggcgg
caagaagagaccaagactaacggtcaggttcacatcctcctggtggggctgaggcggagg
gccatccctctgcccatccagctgtactaccagcagcagaaccaggcagcagctcagact
cttccaccagcccgccacgaagctcctggagaccctcaggccactcttccaggcttacct
cccgggcatctggctcttggatcccagatggtcaatgcaggccactcgactgtttcccgt
cacccggctccccagcaggtgtctcctcagttagcaccaaaccctctagcagcagcagca
gtgcagcagcaacaggtccgacctggtccagtggtccagattcccacgtctgcactggcc
atccagaacctcagcccccagggcccttcagcccagcaacagcagcaacactcccccatg
ctgcccatggggacacctgtcacgctattccagcaggtagtaccacagggccacatactc
accgccagggtacaaggcgtgtgccctcccatcgcccagcacccaggcctgtctcaaacc
tctccccagggtgaacctccatcgacagcttcttccatccaggttggggttggtcaggcg
ctgaatattgggactgtgcccaatacccagggctctcgcgtctcatttcagaatatcgcc
cccaaaccggcagccacgatagccacgcccaaccagcaggcccagcctcagcagcagagt
gtggtgatgctcagtcccaacccccagcagagccagtcctataaccccgccatacaccag
atcgttctcaccaaccccggtgcccagactatccagatagcagggcaggccggagcttct
tcctgcccgcctcctgccccccactccaacacccaggcccattccagtcaaactgtcagc
cacgcactggccatgaaacggcagcagcaacatcaacagctccaaatcatttcccaagcc
cctccctctcaacctacttccaccgagtccagcttgatcaaacagctactgcttccaaag
cgagggccttccactccgggaggaaagctcatcctgcctgctccacaggtgccccttccc
aacagcacgctatcccccagtccacaggtcatctaccagacgaactacagcacccagaat
ccctctccccagccccagcagctcaacgtccagctggtccaaggtcagccctcagcagca
ggaggcccggccctccagacggtccagatcctaccaggccagctcatttccactagtagc
tcaggggctgctaccctcatccagggccccgcgacggccggacaagtcacattcaccgtg
gtccccaacactggctttaccacctctaccgctgctgtggccgcgagtcagggcgcagtg
gctccaggagttccccctcctctgttctctactggaacagtgccccaccacgccccagcc
acaccaccaccgccgccagctcccctcagaggagacaagatcatttgtcagaaagaggag
gaagccaaggacgccacggggctgcatgtccacgagaggaagatcgaagtgatggagaac
tcttccatgggagacggagactcaaacagcaaaaccagtaacggcggcgtagcggcagga
gccaagctgctaaacggtcggaagtgcatggagtctaatctacctccataccactcaggg
aacagccagggggtgctcaacggcccggccacggagagccaccctgccaatgggaagcag
gccctctcccccggcctcgagggcaacccagacccaaaaaagactctggtcaacggggtg
tgtgactttgatcggggcgacggcacctttaacaaaaacattccaaatcacattgcttcc
aaacagtacttggggaacggggcggtgggccccgctgagaagagtcacgggtcagacctc
tcttccccccagcaggaccctgccaaagcccagcaggccgagcagcgcctggtcaacgga
ccccaggcggcgggcaacaggccgccctcggaattaaccaatggacctttggggctggcc
cacgcggtgccggtgctaagacagcaactgctccctaactccccgctcctctccactgtt
actcttacctcccagagtcccgctgcctctgctgctaacggcctagcgtctgagcctcgt
ggtctgaagagaccggctgagagcgaggaccgcagtgcagcgtcctcggggatccctaac
aaagtgggagtacgcatcatcaccatcagcgaccccaacaacgccggcagcagctccacc
atggtggcagtgccagcaggaacagacccaagcacagtagccaaagtagcaatagagaac
gccactcagcagaggaactgcttacccacacaggcagctggctctacgcctaccggaacc
ccgtcccctcccccgctttcccagcatgcaccagccgggaaccacagcccgcagctccca
gcacagcaaagcgccgcagcaccgccggagcaaagcaggaaagcagggcagaacttcaag
tgtctgtggcagtcctgtaaacggtggtttgaaacgccgtctcaggtgttttaccacgca
gcgacacaacatggcggaaagggtgtgtatggaggccactgtcagtgggagggatgtgaa
cctttcccccggcagagactgtccttcgtcacgcatctacaggataagcactgttctcga
gacgctttgctggctggactcaagctagaggaaaagcaggcgctgagtcccaatcagacc
tcttcccagactccgccggcagcaggcagcagctctccggcaccgcgagcaccgaaggca
atcgtgaatcatccgagtgcagctctcatggccctacgcagaggctctcgaaacctggtc
ttcagggacttcactgacgagaaagagggaccagtgaccaaacacatacgactaacggct
gccttaacgttaaagaacatcgccaagcactctgactgcggtcgaatgttggtaaagagg
catgagacgcacctctctgtgctcgcgctaagtaacatggaggtgtccaccacgctcgcc
aaatgcctttacgaactgacgcgctcgctccaggcttaa
DBGET
integrated database retrieval system
