Ammodytes marinus (lesser sand-eel): 307270172
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Entry
307270172 CDS
T12006
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ammm Ammodytes marinus (lesser sand-eel)
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ammm04131
]
307270172 (vps53)
Membrane trafficking [BR:
ammm04131
]
Protein recycling
Others
EARP complex
307270172 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
307270172 (vps53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Syndetin_C
GrpE
GbsR_C
HAUS1
COG5_N
FBF1
IFT74
PsaD
NBD94
Sec8_N
Motif
Other DBs
NCBI-GeneID:
307270172
NCBI-ProteinID:
XP_079909466
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All DBs
Position
3:complement(25448265..25480212)
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AA seq
831 aa
AA seq
DB search
MMEEEEFELAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVSKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPAQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLLDYEE
KYGRMFPEEWCMTERVAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDVAGQKRPESPLEPTNPFLEDEAGEGVGTEKDEDLAKPRKAKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALSTIFQKFLREYAWKILSGNLPKSSSSSSGGLTISSLLKEKEGPE
AAKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISN
SIQLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTR
KYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVNRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSGADGGSSLFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaatttgaattggctgaggatttggaggctattttgcatctaacc
ccagaggtgcaactcgccattgagcaggttttccccagccaagacccactggatagagca
gacttcaacgctgtggaatacatcaacactctgtttcccaccgagcagtctctggccaat
attgatgatgtggtaagcaagattcgtctgaaaattcggcgcctggatgacaacatcagg
acagtggtgagaggccaaaccaatgtgggccaggatggcagacaggctttggaagaggcc
cagatagctatccagcagctctttggcaaaatcaaagatatcaaggacaaggcggagaag
tctgaacaaatggtcaaggagattacgagggacataaagcagttggaccatgccaagcgc
cacctcactacatccatcaccaccctcaaccacctgcacatgttggcagggggtgtggac
tctttagaagccatgaccagaaagaggcaatatggtgaggtggccaacctgctgcaggga
gtggtcaatgtgcttgaacatttccacaagtatatgggcatacctcagatcaggcagctc
tctgagagagtgaaggcagcgcagagtgagttggggactcagatccttgcagattttgaa
gaagcatttcccgcgcagggctccaagagacccggcggtcccagtaacgtgctgagggat
gcctgcctggtggccaatgtgctggacccgcgcatcaaacaggagatcatcaaaaagttc
atcaggcagcatctctcagagtacctggtgttattccaggaaaaccaagatgtcgcatgg
ctggacaagatcgaccggcgctatgcctggatcaaacgacagctgttagactacgaggag
aagtacggacgcatgtttcctgaggagtggtgcatgactgagcgtgtggctgtggagttc
tgccacatcacaagggtggagttagccaaggtgatgcgtacacgggctaaggagatcgag
gtgaagctgcttctgtttgctattcagagaaccacaaactttgagggtcttctggccaaa
cgcttcacaggatgcaccttgaccgacgtagctggacagaagaggccagagagccctcta
gagcccactaacccctttctggaggatgaggcaggagagggtgtgggcacagagaaggac
gaggatctggccaagcccaggaaggcgaaagctccagacaaccctttccatggcatcgtc
tccaagtgctttgaacctcatctatacgtctacattgaatcccaagacaagaacctgggc
gagctgatcgaccggtttgtggctgacttccgagcacagggcccacccaaggccggcaca
gaggagggcggggcggtgctgcccagctgcgccgacctctttgtctattacaagaagtgc
atggttcagtgctcccaactgagcaccggagaaccaatgatcgccctctcaaccatcttc
cagaaattcctgagagagtacgcttggaagatcctttcgggcaacctgcctaaatctagc
agcagtagcagtggtggtctgaccatcagcagtctactgaaggagaaagaaggcccagaa
gctgcaaagttcacggtggatgagctctgcctcatctgcagcatcctcagcactgcagag
tactgcctggctaccacacaacagttggaagagaagctaaaagagaaagttgataaagtc
ctggtggagagaattaatttgactggggagatggatacattcagcactgtcatctcaaac
agcatccagctacttgttcaagatcttgatgctgcctgtgaccctgctctcagtgctatg
agcaagatgccatggcaaagtgtggagcacgttggtgaccagagtccttatgtcacgtcc
atcatcatgcacattaagcaaaatgtgcccatcatcagagacaatctggcctccacgcgc
aaatacttcacgcaattctgcatcaagttcacaaattctttcattcccaaatttatcaac
cacctgttcagatgtaagcctatcagcatggtgggagctgaacaactcctgcttgacact
cactccctgaagacagtcttgctggatctgccctccataggctcccaagtgaatcgtaag
gcccctgccagctacaccaagatagtggtgaaaggcatgactcgcgcagagatgatcctt
aaggtggtgatggccccgcatgaacctcccgtggtgtttgttgataactacatcaagctc
ctggctgacggcaaccctgagaccttccagaagattctggacatgaagggtctgaaacgc
agtgaacagagcagcatgctggagctcttcaggcagaggctccccactccaccctctggg
gccgacggcggctcctctctcttcagtgcccccacacctgagcaggagtcctcccgcatc
cgcaaactagagaaactcatcaagaagagactgtga
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