Ammodytes marinus (lesser sand-eel): 307271304
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Entry
307271304 CDS
T12006
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ammm Ammodytes marinus (lesser sand-eel)
Pathway
ammm04512
ECM-receptor interaction
ammm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ammm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
307271304 (frem2b)
04518 Integrin signaling
307271304 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ammm04091
]
307271304 (frem2b)
Lectins [BR:
ammm04091
]
C-Type lectins
Lecticans
307271304 (frem2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
C1orf162
TMEM154
DUF6522
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
307271304
NCBI-ProteinID:
XP_079909840
LinkDB
All DBs
Position
3:complement(16292680..16349860)
Genome browser
AA seq
3119 aa
AA seq
DB search
MAWISPPQLHGTGAAFIVLAVILTGDAVAQVFDSYGLSYGLRSELSEDTILVANNGIRVP
FGRSVFIDPINDLVIQVQPEDRCSITVLDNDPLSQRPGHLSPKKFPCEFGPNDVKYSHFG
SRSPPRDRVRLQLRYDTQTDTIIIPFMMEVEVIFTQLEVLTKNMPLTVERLLGISNPIDR
RILEFTYDNSAQQCKIASLSSGSVLPRYGKLVDENSLGTMVDCDEFIKMNIRYQHTFALK
SPNRDYIPMLVELHDKEGNLLKQEFFQILVRIKNGEENTAPKPSFVAMMMMEIDQFVMSA
ITIDMLAAEDVESNPDELIFNITSTLSFEEGYIVSTDDRNLPITSFYQGDLKDLKIAYKP
PAVDSDTERIFQIEFEVVDSEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPL
SSSQNLEISDEDNLDKVTITVIDGLRHGELTVLGSRRTFFTPTDLDTGVVIYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEAPIINANTGIVLFKNQMMPVSSLMLSAADID
SEDSSIKFTIEPPFSTIGQVLLRQSEAPEDPSTWKFNTEDELYEKVVSEWLQQDITDGKL
FYKHIGPHSTSTVMDQFVFRVQDDNDPPNQSGESSFIIKILPVDDLPPELYPETTLQMTV
HEYQITYFRRKFLRYTDLDSEDRDLKYTVIQPPTDTDENNPVVLGALILTEKPNTEVTTF
TQAQINHHKIAYKPPDLELGITSHILQFRYIVEDTSGNIVEGDFTIFLKPVDNKPPQITN
SGFTVLERGTHFITSAELDTSDTDTDSKQISFTIIQPPLHGHIQFTFIEMTKGDSFSLED
IGSGRISYIHNGDESTVDSIQVDVSDGVHVVSITIKISVKPIDDEIPTIILPAGIIGSYI
DVLENGATEITSNVIQGRDEDTDDLRLTFIVEDPPSLGEILVRGVPSGTFTQADIINGLV
VYTHTSGEIGLTTKDDFFNLTLTDMSDEWTVGGNKITGVRVHVTILPLDSQAPEVFVGPQ
FTVVEGEKSVIQILHISTDDVDTPSDDLLCTIIVQPTSGYVENISPAPGSEKSRSGTAIS
AFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPISIIPSNDEKPEIY
MREFVVMEGMNIVIDTPILNGVDADLPSDQLTFIITNPPKHGFILNQLTTGTVPVSNFTL
DQIRETSSIVYEHDDSETTEDSFDIVLTDGKFSVEKTVIVMIIPVDDETPRMAINDGLEI
EIGDVKVINSNVLKATDLDSEDKTLTYIIRYAPGQGYLQRTTPSGELQNITIGMNFTQNE
VDLDLILYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVTSKGVSLKEG
GRVTLTTDLLSTSDHNSPDEHLVFTITRAPMRGHLECTDTPGMPISSFTQLQLAGNKVYY
IHTADDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTIHGLVVTEGENKLITPF
ELTVEDRDTVDRLLKFTVTQIPVHGRLLFNNTRPVTSFTKQDLNENMISYKHDGTESAED
SFSFTVTDSTHTDFYIFPDTVYETRRPQVMKITVLPVDNGTPQIVVNKGAPTLQVLETGH
LGFVITSKTLKAEDRDSIQNSVTFTITVAPEHGYLINIGKGNSTITVFTQAEIDEMNICY
VLRNSDNATNDIFYFSIEDNGGNKLKNQQFRLNWAWISLEKEHYVVDEEVKFLEVVLKRR
GYLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQTTSIWRVRILSDSEYEVSETFQ
IVLSEPVMAALEFPEIATVEILDPDDESTVFIPSAAYNIEEDIGELLIPVHRSGDASQEL
MVICYTQQVSATGTIPTTVLSYSDYISRPEDHHSILRFDKGEVEKSCRVVIIDDSLYEDE
ESFNVILSMPMGGRLGSDFPAAKITIIPDMEDAPIFYFGNTDYHVDESDSFLDVQVWRTG
TDLSKGGTVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVNMQTFRVTILDDLGQPVLEG
PEKFELILRMPMNGILGEPSKATILINDSVSDLPKVQFRDAVYVGDENSGQISATVYRSG
DISYKSTVRCYSRQGTAQVMMDFNERPNTDASIITFLPGEIEKLCLLVLVDDIEHEEDEE
LRLVLGSPKSDSPFGASIGIQNETLIKIKDDADKAIIRFGETKFSVTEPKGSGQVSVVKI
SVLRVGDTSKVSIVRVHTKDGSATSGEDYHPISEEIVFKEGDREHYVEVEILYDSVREMR
EAFTVHLKPDENMVAETKMSKAIIYIEETDSMADVTFPSVPIVVSLLHYDDIDRTTDSLP
VAGYPVICVTACNAKYPDFDRTGSICVSENINNTLTRYRWLVSAPTGSDGVTSSMREVDF
DTFFTSSKLITLDSVYFQAGSRVQCAARGVNSNGDEGLELSSPIVSISVYEGMCQPRAVG
TVGAEPFSAKLRYTGTEDPDHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGTRV
GNHRCSNLLDYTEVKTRYSFLTAATKNPEVIGETAPYQYSTAIRGSSTLRFYRNLNLEAC
LWEFNSYYDMSELLSDCGGTIGTDGQVLNLVQSFVTLRVPLHVSYVFHSPVGAGGWQHFD
LQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINGQGRLVVNFRTEARYRGLF
VFGHPASPLSSMVMCPDHPGLTFNLSLVRNEPTYNQPIQQWTFVSDFAVRDYSGTYTVRL
VPCTTPPGLEYTIPPVCNPREPLTFDMDIRFQQVSDPVAAEFSLNTQMILLSKRMLWLSD
GSMGFGQESDTAFSQGDTIYGRVMVDPVQNLGDSFICSIEKVFLCTGADGYVPKYNPIDF
EFGCLADAPSLLHRFKIIDKAQPDTQALSFGNIAFNAFLAVDDSDALALVRQPGSDGFRM
DSSALFQVSAGREWFIHTIYTVRSRDNANRGIGKRSLEYHAMSSHTHHHHHLLPKSPHRG
RRSADDEPDIIEEIGVSNNRGTNILHISLDRSSQRRTSPEKEIFTKGIVPHELNSRDSSD
DGLVLIIGVFVGLLLTVLITIVVVLLVRSKREKKDMPKCSSSAEHMMTRVVNNSDSSEV
NT seq
9360 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatttcccccccgcagctgcacgggactggtgctgcctttattgtgcttgcg
gtgattctgacaggtgatgcagtagcgcaggtttttgacagctatggattatcatatggc
ttaaggtcggagctgtcggaggacacgatattggttgccaataatgggatccgcgtgcct
ttcgggagatcagtcttcattgatccaatcaacgatttggttatccaagttcagcccgag
gatagatgcagcataacagttctggacaatgaccccttgtctcaaagacctggacacctg
tctccgaaaaagtttccgtgtgaatttggccccaacgacgtgaagtattctcactttggc
tcgaggagtcctccgagggatagagtgagattacaactcaggtatgacacccaaacggat
accattataataccttttatgatggaggttgaagtcattttcacacagctagaagtgctt
accaaaaacatgccactcactgttgagagattgctcggcataagtaaccctatcgataga
agaattttagaattcacctatgataacagtgcacaacaatgcaaaatagcctctctatcc
agtggcagcgttctgcccaggtatgggaaacttgtggatgagaacagcctgggaacaatg
gtagactgtgatgaatttattaaaatgaatatccgttatcagcacacttttgctttgaag
tcaccaaacagagattacatcccaatgcttgtggagttacatgataaggaaggcaatttg
ctcaaacaggaatttttccaaattttggtaaggattaaaaatggggaggagaacacagct
cctaaacccagctttgttgccatgatgatgatggaaatagaccagtttgtaatgtcagcg
ataactattgacatgctggctgcagaggatgttgagtctaatcctgacgaattaattttc
aacatcacatccaccttgtcctttgaggagggctacatagtgagcacagatgataggaat
ttaccaataacctcattctaccaaggagacctcaaagacttgaaaattgcctacaagccc
cctgctgtggattcagacactgagcggattttccagattgagtttgaggtggtggactca
gagggggctgtgtcagacccttttgctttcatgattgttgttaagcctatgaacacgttg
gcccctgtggtgacaagaaatactggccagttactgtatgagggtcagtccaggccgctg
tccagttcacagaatctggaaatcagtgatgaggacaatttagacaaagttacaatcact
gttattgatgggctgaggcatggagaattaactgttcttggctcaaggaggacatttttc
accccgactgacctcgacacaggagtagtcatttatcaacatgatggcagtgacacatac
agtgacaatattattttcaggatgactgatggcacaaatgaggtggagtttctgtttcca
attactgttgtgccaactgatgatgaggctcccataatcaatgcaaacactggcatagtt
ttatttaaaaaccaaatgatgccagtttcctcactaatgctcagtgcggcagacattgac
tctgaggattcttcaataaaattcacaatagagcctcccttttccacaattgggcaggtg
ttgctgcgccagtctgaggcaccggaggacccatccacatggaagtttaatacagaggat
gaattgtatgagaaagtagtttctgaatggctgcagcaggatattactgatggtaaattg
ttttacaagcatattggacctcatagtaccagcacagtcatggatcagtttgtgttcaga
gttcaagatgacaatgacccaccaaaccaatcaggggagagctcattcattatcaaaatt
ctcccagttgatgacctcccacctgaactgtaccctgaaacgactttgcaaatgactgtg
catgagtatcaaattacatactttcggagaaaattcctccgttacactgacctggactca
gaggatcgggatctcaaatacactgtcatccagccaccgacagatacagacgagaataac
cctgtagtattaggagctctgatattaactgaaaagccaaacactgaagtcacaacattt
actcaggcacaaattaaccaccataaaatagcttacaaaccacctgatcttgagcttgga
attacctctcacattttgcagtttaggtacattgtggaggatacttctggaaatatcgta
gaaggagatttcactatctttttaaaacctgtggataataagccaccacaaattacgaac
tctggatttaccgtgcttgaacgcggtacacatttcataactagtgctgagctggacacc
tcagacaccgatacagacagcaaacagatatccttcactattattcagcctccactgcat
ggccatatccagtttacattcattgaaatgacaaaaggagacagtttcagcctggaggat
attggaagtggcagaatttcatacatccataatggagatgaatcaacggttgattcgata
caagtagatgtcagcgatggggttcacgttgtctcaattactataaagattagcgtgaag
ccaattgatgatgaaattccaaccatcattctcccagctggtattattggctcttacata
gatgtactggaaaacggagcaacagaaatcactagtaatgtcattcagggaagagatgag
gatacggatgacctccgtttgaccttcattgtggaggacccgccatcattaggtgaaatt
ctggtaagaggtgtcccgtctggcacattcacccaagctgatatcattaatggactggtg
gtctatactcataccagtggggaaataggcttgaccacaaaggatgactttttcaatctc
acattgacggacatgtcggatgagtggactgttggaggaaataagatcacaggtgtcaga
gttcacgtaacaattcttcccctggacagccaggctccggaggtctttgtggggccacag
ttcactgttgttgagggagagaagagtgtcattcaaattcttcatattagcactgatgat
gtcgacacccccagcgatgacctcctctgtacaatcattgtacagccgacctcaggttat
gtggaaaatatctccccagccccaggctctgagaaatccaggtccgggacagctattagt
gctttcaccataaaggacatcagacagaatcacatttactatgttcaaagcattcacaaa
ggagtcgagccagtggaggacaggtttacgttcaggtgctctgatggcatcaatttctct
gaaaggcactttttccctatctccataatcccctctaatgatgaaaagcctgagatttac
atgagagagtttgtagttatggagggcatgaacatagtcatcgacactcccatcctgaat
ggtgtggatgcagatctcccctctgatcagctcacattcattatcaccaatccccccaag
catggatttattctcaatcagctcactaccggcactgtccctgtctctaacttcaccttg
gatcagatcagggagacctccagcattgtgtatgaacatgatgactcagagaccacagag
gacagctttgatattgtgctcacagacggaaagtttagtgtagagaagacagttatagtt
atgattatccctgtggatgatgagaccccgaggatggcaataaatgatggccttgaaatt
gagattggtgatgtgaaagtcataaacagcaatgttttaaaagctactgatctagactct
gaggataaaacactgacttacataattcgctatgcccctggtcaggggtatttgcaaagg
acaaccccctctggggagttgcaaaatatcaccattggaatgaactttacacagaatgaa
gtggatttggatttaattttatacatccataacgggcaagaagggattcgtgacctcatc
aaatttgacgtaacagatggcatcaaccctttgatcgacagatacttttacgtcacagtg
ggtggaattgacatggttttcccggatgtgaccagtaaaggtgtatcacttaaagagggt
ggcagggttactctaacaacagacctgctcagcaccagtgaccacaacagcccagatgaa
cacttggttttcacaattaccagagctccaatgagaggacacttggagtgcacagacaca
ccggggatgcccatttcatccttcactcagctccagctggctggaaacaaagtctactac
atccacactgctgacgatgaagtaaaaatggatagctttgaatttgaagtaactgatggc
tataaccctgtgttccgcactttccgcatctccatcactgatgtggacaataaaaagcct
gtggtgacaatacacgggctggtggtgacagagggagagaacaaactcatcacgcctttt
gaactaaccgtggaggacagagacaccgttgaccgcctcttaaagttcacagttactcaa
atcccagttcatggtcgcctgctctttaacaacacccggcctgtcacctccttcacaaag
caggacctgaatgaaaacatgatcagctacaagcatgatggcacagagagtgcagaggac
agcttctccttcactgtcaccgatagcactcacacagacttctacatcttccctgacaca
gtatatgagactcgcagaccccaagtgatgaagattactgtcctcccagtggataatggg
acaccacagattgtggtgaacaagggagccccaacactgcaggttctggagaccggtcac
ttgggttttgtgatcaccagtaaaacccttaaagcagaggacagagacagcattcagaat
tctgtgacctttacaataactgttgccccagaacatggatacctgatcaacatcggcaaa
ggaaattccacaatcactgtcttcacacaagctgaaattgatgagatgaacatttgctat
gttctaaggaatagcgacaatgctacgaatgacatcttctatttttccattgaggacaat
ggaggcaacaaactgaagaaccagcagttccgtctgaactgggcttggatttctttagag
aaggaacactacgtggtggatgaagaggtcaagttcctcgaggtggtgttgaaacgtcgg
ggctacttgggggagacctccttcgttagtataggcacaaaggatggcactgcagaaaag
gacaaagatttccgagggaaagctcagaaacaggtgcagttcaacccgggccagaccaca
tccatctggagggtgaggatcctgtcagatagcgagtacgaagtgtcagagacgttccag
attgttctgtctgagccggtgatggcagcccttgaattcccagaaattgctactgtggag
atcctggacccggatgatgagtcaacagtgttcataccgtcagctgcatacaacatagag
gaagacattggtgagctgcttatcccagtgcacaggagtggtgatgccagtcaggagctc
atggtcatctgctacacccagcaagtttcggccacgggcaccatccccaccacagtgctg
tcctactctgattacatctccaggcccgaggaccatcacagcatcctgcgcttcgacaag
ggagaggtggagaagtcctgccgggtcgtgatcattgatgactcgctgtatgaggacgag
gaaagcttcaatgtcatcctcagcatgcccatgggcggacgcctgggctcagacttcccc
gcggccaaaatcacaatcattcctgatatggaggacgctcccatcttctactttggcaac
acagactaccacgtggatgagagtgatagcttcctggatgtgcaagtgtggaggacgggg
actgatctctccaaaggaggaactgtcacagtgcgctccagaaaaacagatcctgtctca
gccgaggctggtgtggattacgttgggatcagtcggaatctggactttgcaccgggggtc
aacatgcagacctttcgtgtgaccatcctggatgacttgggtcagccggtgctggagggg
cccgaaaagtttgaactgatactcagaatgcctatgaacgggatcctcggggagcccagc
aaagctactatcctcatcaatgactctgtttcagacttgccaaaggtgcagttccgtgat
gctgtgtatgtgggcgatgagaactctgggcagatctcggctactgtgtaccgcagtggg
gatatcagctacaagtccactgtccgctgttacagcaggcaggggacagcccaggtcatg
atggacttcaatgagagacccaacacagatgcttccatcatcaccttcttaccaggagag
atagaaaagctttgtttacttgtactagtcgatgacatagaacacgaagaagatgaagag
ctccgtcttgtgttgggaagtcccaagagtgactctccattcggagcgtctattggaatc
cagaatgaaacgctcatcaagataaaagacgatgctgacaaggcgatcatcaggtttgga
gaaaccaaattcagtgtgactgagccgaagggaagtggccaagtgtctgtggtgaagatc
tcagttctgcgtgttggagacacctccaaggtctctattgtccgagttcacactaaggac
ggatctgctacgtctggggaggactaccatccaatatcggaggagattgtgttcaaagag
ggtgacagagagcactatgtggaggtggagattctatacgacagtgtcagagaaatgagg
gaggcgttcactgtgcacctgaagcctgatgagaacatggtggcagagacaaagatgagc
aaagccataatctacatcgaggagacggacagcatggcggatgtcaccttcccctctgtg
cccatagtggtttctctgttgcattacgatgacattgacaggaccacggactctctccct
gtggccggataccctgtcatttgtgtcactgcctgtaacgcaaagtacccagactttgac
agaactggctccatctgtgtgagtgagaacatcaacaacaccctaactcgttaccgttgg
ctcgttagcgcccccaccggctctgatggcgtcaccagttctatgagggaggttgatttt
gacacgttcttcacttcgtccaaactcatcactctggactcagtctacttccaggctggt
tccagagtccagtgcgctgcgaggggcgtgaactctaacggggacgaaggtctggagctc
agtagccccattgtgtccatcagcgtatacgagggcatgtgccagcctcgtgctgtaggc
acagtgggggccgagcccttctctgccaagctgcggtacactggaacggaagacccagat
caccccaacctcatcaaactaactgtcaccatgcctcacattgatggtatgttgcctgta
gtgtccacacggcccctgtccaactttgagctgacactgagccctgacggaacccgtgtt
ggcaaccatcgctgctccaatttgttggactacaccgaggtcaagactcgctacagcttc
cttaccgctgccaccaaaaatccagaagtgatcggcgagacggccccttaccaatacagc
actgccatcaggggatccagtacactacgattctacagaaacctcaacctggaggcctgt
ttgtgggaattcaacagctactacgacatgtctgagctgctcagtgactgtggaggcacc
atcgggactgatggacaggtgctgaatctggtccagtcctttgtgacactacgagtcccg
ctccatgtatcatatgtcttccactcccctgtgggagcaggaggatggcagcactttgac
ttacagtcagagctcagactcacattcgtgtacgacactgccatcttatggagggatggt
atcggtagtccaccagaggctgaactacaaggtgctctttatccaaccagtatgcgtata
aatggccaaggacgactcgtagtcaacttccgcactgaggctcgatacagaggcttattt
gtgtttggacacccagcttcacccctaagctccatggtcatgtgtccggaccaccctggt
ttgacctttaacctcagtcttgtgaggaatgagccaacctacaaccagcccatacaacag
tggacatttgtctctgactttgctgtgcgtgactactctggcacttacacagtgcggctg
gttccctgtacaacccctcccggtctggagtacaccatcccgcctgtctgcaatcccaga
gagcctcttaccttcgacatggacatccgctttcagcaggttagcgatcccgttgctgct
gagttcagtctgaacacgcagatgatcttactctctaaacggatgctctggctctcagac
ggctccatgggctttggacaggaaagtgacactgcattctcacagggggatacaatttat
ggtcgagtgatggtggatccagtgcagaacttgggtgactcctttatttgtagcatagag
aaagtgttcctatgtactggagctgatggatacgtccctaaatacaaccccatcgacttt
gagtttggctgtctggctgatgctccgtcactactccacagattcaagataattgacaaa
gcccagccagatacccaggccctgtcatttgggaatatagcgttcaatgccttcttggca
gtggatgactcagacgctttagctttagtgagacaacctgggtcagatggtttcagaatg
gattcctcagctcttttccaggtgtctgcggggagagagtggttcattcacaccatctac
accgtccgctctcgggacaacgctaaccgcggcatagggaagagaagcctggagtaccac
gccatgagcagtcacacacatcatcatcatcatctgcttccaaagagtccacatcgcggc
aggagatcggccgatgacgagccggacatcatagaggagatcggtgtgagcaataaccgc
ggcaccaacatcctccacatctcactggaccgcagcagccagcgcaggaccagcccggag
aaagagatcttcaccaaagggatcgtcccccatgagctcaacagcagagacagcagtgat
gacggactagtgttgatcattggtgtctttgtgggactgctcctcacggtgctcataacc
atcgtagtggtgttactggtccggtccaagcgagagaagaaagacatgcccaagtgctcc
agcagcgccgagcatatgatgacacgagtcgtcaataacagtgacagctcagaggtctag
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integrated database retrieval system
