Amycolatopsis mediterranei S699: RAM_01460
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Entry
RAM_01460 CDS
T01822
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_01460
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_01460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
HTH_3
HTH_Crp_2
HTH_31
LacI
HTH_24
HTH_IclR
HTH_7
HTH_AsnC-type
MarR_2
HTH_37
HTH_38
HTH_28
HTH_26
CENP-B_N
MarR
DUF7343
KORA
GerE
HTH_Tnp_ISL3
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AEK38787
UniProt:
A0A9R0NQK0
LinkDB
All DBs
Position
complement(303808..304587)
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AA seq
259 aa
AA seq
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MSDPAGSSGNDLDVGALFTRLAALPADSPERERIRDTLVRTHLELARNLARKFRNRDEAM
EDLVQIATVGLIHAVDRFDPAQGTDFLAFAVPTISGELRHHFRDNSWSVRVPRRLKELNA
NISAAREELTVQLSRAPKPSEIAARLGVPIEDVYEGLRAGQGRYGASLDHLLENAAHTRF
GAPDAELGQAELREALRPMLESLPERERKIVALRFGSGMSQSDIARRVGVSQMQVSRLLA
ATLKKLRSGLDESELADGT
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcccgccgggagcagcgggaacgacctcgacgtcggcgcgctgttcacccgt
ctcgctgccctgccggcggactcgccggagcgcgaacgcatccgcgacaccctcgtgcgc
acgcacctggagctggcgcggaacctggcccggaagttccgcaaccgcgacgaggcgatg
gaggacctggtccagatcgccacggtcgggctcatccacgccgtcgaccggttcgacccc
gcgcaggggacggacttcctggcgttcgccgtgcccaccatctccggcgagctgcggcac
cacttccgggacaacagctggtcggtgcgggtgccgcggcggctcaaggagctgaacgcg
aacatctcggccgcgcgcgaagagctcaccgtgcagctctcgcgtgccccgaagccgagt
gagatcgccgcgcggctcggggtgcccatcgaagacgtctacgagggcctccgcgccggt
caaggccgctacggcgcctcgctggaccacctgctggagaacgctgcgcacacccgcttc
ggggcgccggacgccgagctcggccaggcggagctgcgcgaggcgctgcgcccgatgctg
gagagcctgccggagcgggagcgcaagatcgtcgcgctgcggttcggctcggggatgagc
cagtcggacatcgcccgccgtgtcggggtgtcccagatgcaggtgtcgcggctgctggcc
gcgacgctgaagaaactgcggtccggcttggacgaatccgagctggccgacggcacctga
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