Amycolatopsis mediterranei S699: RAM_03260
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Entry
RAM_03260 CDS
T01822
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00523
Polyketide sugar unit biosynthesis
amn01100
Metabolic pathways
amn01110
Biosynthesis of secondary metabolites
amn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RAM_03260
Enzymes [BR:
amn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
RAM_03260
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEK39144
UniProt:
A0A9R0U623
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All DBs
Position
complement(695979..697286)
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AA seq
435 aa
AA seq
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MVDSARSDLLTQVRDYHDAQSPGPAPFIPGQTPILSSGAVLDAADREALVAAALDLRIAS
GTIATKFESSFARKLKRRKAVLTNSGSSANLLALSTLTSPTLGDEQLKPGDEVVTVAAGF
PTTVNPILQNGMIPVFVDIELGTYNTTAERVEAAISPRTRAIMIAHTLGNPFPVAEIAEI
AQRHGCHLIEDNCDAVGSTYQGQLTGTFGRFSTVSFYPAHHLTMGEGGMLLSSDIKLAKL
AKSFRDWGRDCWCEPGEDDRCLKRFDLHLGTLPEAYDHKYVFSEVGYNLKSTDIHAALGL
SQLAKLPDFVDARKRNWRQLREGLDGLPGLILPEATPGSDPSWFGFIITVKPDAGFDVPE
VVEYLEARNIRTRRLFAGNLTRHPAYIGKPQRIAGPLTNSDIVTERTFWIGVYPGITTEM
IEYVIGTLKEFVATH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactcagcccgatcggacctgctgacgcaggttcgcgactaccacgacgcccag
tcccccgggccggcgccgttcatcccggggcagacaccgatcctgtcgtccggggcggtg
ctggacgccgccgaccgcgaagccctggtggccgccgcgctcgacctgcgcatcgcctcc
ggcaccatcgcgacgaagttcgagtcgtccttcgcccggaaactcaagcggcgcaaggcg
gtgctgacgaactccggctcgtcggcgaacctgctggcgctgagcacgctgacgtccccg
acgctgggcgacgagcagctcaagccgggcgacgaggtcgtcacggtcgcggccggcttc
ccgaccacggtgaacccgatcctgcagaacggcatgatcccggtgttcgtcgacatcgag
ctcggcacgtacaacacgaccgccgaacgggtcgaagcggcgatctccccgcgcacgcgc
gccatcatgatcgcccacacgctgggaaatcctttcccggtggcggaaatcgccgaaatc
gcccagcgccacggctgccacctcatcgaggacaactgcgacgccgtcggctccacctac
cagggacagctcaccggcacgttcggccggttctcgacggtgtccttctacccagcccac
cacctgaccatgggcgagggcggcatgctgctgtcctcggacatcaagctggccaagctg
gcgaagtcgttccgcgactggggccgcgactgctggtgcgagcccggcgaggacgaccgc
tgcctgaagcggttcgacctgcacctcggcacgctgccggaggcctacgaccacaagtac
gtcttctccgaggtcggctacaacctcaagagcaccgacatccacgccgcgctcgggctg
agccagctggcgaaactgccggacttcgtcgacgcccgcaagcgcaactggcgtcagctg
cgcgaaggcctcgacggcctgcccgggctgatcctgccggaggccacgccgggcagcgac
ccgagctggttcgggttcatcatcacggtgaaacccgacgccggcttcgacgtcccggag
gtcgtcgagtacctcgaggcgcgcaacatccgcacccggcggctgttcgcgggcaacctg
acccgccaccccgcctacatcggcaagccgcagcgcatcgccggcccgctgaccaacagc
gacatcgtcaccgagcggacgttctggatcggcgtctacccggggatcaccacggagatg
atcgagtacgtgatcggcacgctcaaggagttcgtcgccacgcactga
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