Amycolatopsis mediterranei S699: RAM_04075
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Entry
RAM_04075 CDS
T01822
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn03420
Nucleotide excision repair
amn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RAM_04075
03430 Mismatch repair
RAM_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amn03400
]
RAM_04075
Enzymes [BR:
amn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAM_04075
DNA repair and recombination proteins [BR:
amn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAM_04075
MMR (mismatch excision repair)
Other MMR factors
RAM_04075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEK39307
UniProt:
A0A9R0NRL6
LinkDB
All DBs
Position
853449..855863
Genome browser
AA seq
804 aa
AA seq
DB search
MDTLFDLPAATPVRKPAAGGQAELLDDLNPAQREAVTHAGGPLLVVAGAGSGKTRVLTRR
IAYLLGQRRVHPGEIMAITFTNKAAAEMRERVAALVGRRANAMWVSTFHSMCVRILRREA
KVLDMSSSFSIYDSDDTKRLITLVARDLDIDPKRYAARTLAVHISNLKNELTDPETAAAN
AGNDLERRVAEVYGEYQRRLNQANAFDFDDLIMRTVSLLQTFPDVAEYYRRRFRHVLVDE
YQDTNHAQYTLVRELAGTAPNEAGVEPAELVVVGDADQSIYAFRGATIRNIEEFERDFPN
AHTILLEQNYRSTQTILNAANAVIERNPNRRAKRLWTDSGDGEKIVGYVADNDHDEAAFV
AGEIDALAEKGEADYSDVAVFYRTNNQSRVFEEIFIRLGLPYKVVGGVRFYERREVRDMI
AYLRVLANPEDTVSLRRVLNVPKRGIGDRAEAVVATHAERERISFAQALRDAVEGKVPLL
NPRSVKAIGGFVAMLDELGMLVADGAEVHDVLEAVLDKTGYRIELEESEDPQDHTRVENL
DELVTVAREFTEITAEVAADENAEPVVEDGVPAPGSLPAFLERVSLVADADSVPSPDGGE
EGDGGAGVVTLMTVHTAKGLEYPVVFCTGWEDGVFPHMRALGDPAELAEERRLAYVAITR
ARKRLYVSRAITRSAWGQPSMNPASRFLDELPPDLVDWRRLEPSSSGFGSFGSGSRGTPR
AATTWGGRRSSSPSSSGTPSFGKGWKDTVALKLDVGDRVSHDKYGLGTVISCDGVGPRAT
ATIDFGAAGKVRLMLIGSVPMVKL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctcttcgatctccccgccgcgacccctgtgcgcaagcccgccgccggcggg
caggccgagctgctcgacgacctcaaccccgcccagcgcgaagcggtcacccacgccggt
ggcccgctgctggtggtggcgggcgcgggttcgggcaagacccgggtgctgacccgccgg
atcgcctacctgctcgggcaacgccgggtgcaccccggcgaaatcatggcgatcacgttc
accaacaaggccgccgccgaaatgcgcgagcgcgtcgccgcgctcgtcgggcgccgcgcg
aacgcgatgtgggtgtcgacgttccactccatgtgcgtgcggatcctgcgccgcgaggcc
aaggtcctggacatgtcgtcgagcttctccatctacgactccgacgacaccaagcggctg
atcaccctggtggcgcgggacctcgacatcgacccgaagcgctacgccgcccgcacgctc
gccgtgcacatctcgaacctgaagaacgagctcaccgacccggagaccgcggcggcgaac
gcgggcaacgacctcgagcgccgcgtcgccgaggtctacggcgaataccagcggcggctg
aaccaggccaacgccttcgacttcgacgacctcatcatgcgcacggtctcgctgctgcag
acgttcccggacgtcgccgagtactaccggcggcgcttccgccacgtgctggtcgacgag
taccaggacacgaaccacgcgcagtacaccctggtccgcgagctggccgggaccgcgccg
aacgaagcgggcgtcgagccggccgagctggtcgtcgtcggtgacgcagaccagtcgatc
tacgccttccgcggcgcgacgatccgcaacatcgaggagttcgagcgggacttcccgaac
gcgcacaccatcctgctggagcagaactaccgctccacgcagacgatcctgaacgcggcc
aacgccgtgatcgagcggaacccgaaccggcgggccaagcggctgtggacggattcgggc
gacggcgagaagatcgtcggctacgtcgcggacaacgaccacgacgaagcagcgttcgtc
gcgggcgaaatcgacgcgctggcggagaagggcgaagccgactactccgacgtcgccgtc
ttctaccgcaccaacaaccagtcccgcgtcttcgaagagatcttcatccggctcggcctg
ccgtacaaggtcgtcggcggcgtgcggttctacgagcgccgcgaggtccgcgacatgatc
gcgtacctgcgcgtgctggcgaaccccgaggacacggtcagcctgcggcgcgtgctgaac
gtgcccaagcgcggcatcggcgaccgcgcggaggccgtcgtggcgacgcacgccgagcgc
gagcggatctccttcgcccaggcgctgcgggacgccgtcgagggcaaggtgccgctgctg
aacccgcgctcggtcaaggcgatcggcgggttcgtggccatgctcgacgagctcgggatg
ctggtggcggacggcgccgaggtgcacgacgtcctggaagcggtgctggacaagaccggt
taccgcatcgagctcgaggagtcggaagacccgcaggaccacacgcgcgtggaaaacctc
gacgagctcgtcaccgtcgcgcgggagttcaccgagatcaccgccgaggtcgccgcggac
gagaacgccgagccggtcgtcgaggacggcgtcccggcgccgggctcgctgccggcgttc
ctcgaacgcgtttcgctggtcgcggacgccgactcggtgccttcgcccgacggcggcgag
gaaggcgacggcggcgcgggcgtggtcacgctgatgaccgtgcacaccgcgaagggcctg
gagtaccccgtggtgttctgcaccggctgggaggacggcgtcttcccgcacatgcgggcg
ctgggcgacccggcggagctggccgaggagcgacggctggcgtacgtcgcgatcacccgc
gccaggaagcggttgtacgtctcgcgcgcgatcacgcgctcggcgtggggccagccgtcg
atgaacccggcttcgcggttcctcgacgagctgccgccggacctggtcgactggcggcgg
ctggagccgtccagcagcggcttcggctccttcggttccggttcgcgcggcaccccgcgg
gcggcgaccacctggggcggccggcggtcttcttcgccgtcttcgtcgggcacgccgtcg
ttcggcaagggctggaaggacacggtggcgctgaagctggacgtcggcgaccgcgtcagc
cacgacaagtacggcctcggcacggtgatctcctgcgacggcgtcggcccgcgggccacg
gccacgatcgacttcggcgcggcgggcaaggtccgcctgatgctgatcggcagcgtgccg
atggtgaagctctag
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