Amycolatopsis mediterranei S699: RAM_05030
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Entry
RAM_05030 CDS
T01822
Name
(GenBank) RNA polymerase sigma factor
Organism
amn
Amycolatopsis mediterranei S699
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
CLIPPER
Motif
Other DBs
NCBI-ProteinID:
AEK39498
UniProt:
A0A9R0NRT7
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Position
complement(1043513..1045630)
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AA seq
705 aa
AA seq
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MSTVPADLSGKSDSELIAEVRSGKIASYGTLYERHTGAARNLARQLARSSSEADDLVSEA
FAKVLDTLRGGKGPDTAFRAYLLTALRHTAYDRTRKERRVDLNEDMTEVGGAAAEALTVP
FSDTAVAGLERTMAAKAFARLPERWQAVLWHTEIEQQSPAEVAPLLGLTANGVSALAYRA
REGLRQAYLQVHLQENAGERCRACAERLGAWTRDGLSKRERAQVESHLDECDRCRALAAE
LADVNGGLRAIIAPIVLGGAALGYLATIGAAKASAATAIVAAVVIALTAGGGTQEVPVAA
PVPPPAQQVAPPAPQPPPPAPPAPQQPAPPVPQPPVPQPPAPPAAPSVAPAPPPVAPPAP
APPPAPAPPVPAPPSMSATTPPGGVELSPGAASNLPITVRNDGGSVSEPVAVALKLPPGV
RAVDTGGGGAPQARAEDPTPISVNCPGGQGTVVCKTGAGLQPGQSATLNFRLQADEDAEG
GTVTGSVTAGVQISVHVSVKVTVKLPPDAVVLEAQGDGLSAFPWNHHPLVYVRVRNTGET
TKPVTVTFDTPLKQWWSLRGFPCTTTDESASCTTKSAVAPGQHVNLWVRLLGRPNDGRVT
INAQLGRATAPPVTVDFGCWRHWCGKDPLPTPTTPSVPTTTPSKPKPTPSKPTPKPPVTT
TDTDEPASEPPVSSTTTSAPPRSGGNPGAKPPTVSPGKVFGWLTG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgttcccgccgatctcagcggaaagagtgactccgagctgattgcggaagtc
cgctccgggaagatcgcgtcgtacggaacgctctacgaacgacacaccggcgcggcccgc
aatctggcccgccagctggcccgctccagctccgaagccgacgatctcgtgtccgaggcg
ttcgccaaggtgctcgacacgctccgtggcggcaagggcccggacacagccttccgggcg
tacctgctgaccgcgctgcgtcacaccgcgtacgaccggacccgcaaggagcgccgggtc
gacctcaacgaggacatgaccgaggtcggcggcgccgcggccgaggcgctgaccgtgccg
ttctccgacaccgcggtcgccgggctcgagcggacgatggccgccaaggcgttcgcgcgg
ctgcccgaacgctggcaggcggtgctctggcacaccgagatcgagcagcagagcccggcc
gaggtcgcgccgctgctgggcctgaccgcgaacggagtctccgcgctcgcctaccgcgcc
cgcgaggggctccgccaggcctatctgcaggtccacctgcaggagaacgccggggaacgc
tgccgcgcctgcgccgagcggctcggcgcgtggacccgcgacgggctgtccaaacgggaa
cgcgcccaggtcgagagccacctcgacgagtgcgaccggtgccgggcgctggccgcggag
ctggccgacgtgaacggcgggctgcgcgcgatcatcgccccgatcgtcctcggcggcgcc
gcgctgggctacctcgccaccatcggcgccgcgaaggcgagcgcggccaccgcgatcgtc
gcggccgtcgtcatcgcgctcaccgcgggcggcgggacgcaggaggtcccggtcgccgcc
ccggtgccgccgccggcccagcaggtcgcaccgccggccccgcagccgccgcccccggcc
ccgcccgcgccgcagcagcccgcacccccggtaccccagcccccggtgccccagccgccc
gcgccgcccgcggccccgtcggtcgcgcccgccccgccgccggtcgcgccccccgctccg
gcaccgccgcccgccccggccccgcccgtgccggcaccgccgtcgatgtccgcgacgacc
ccgccgggtggcgtcgagctcagcccgggcgccgcgtcgaacctgccgatcaccgtgcgc
aacgacggcgggagcgtgtccgagccggtggccgtcgcgctgaagctgccgcccggggtg
cgtgcggtcgacaccggcggtggtggcgcgccgcaggcccgcgcggaggaccccaccccg
atctcggtgaactgccccggcggccagggcacggtcgtctgcaagaccggcgccggcctg
caacccggccagagcgcgacgctgaacttccggctgcaggccgacgaagacgccgagggt
ggcacggtgaccgggtcggtcacggccggcgtgcagatctccgtccacgtgagcgtcaag
gtcaccgtgaagctcccgccggacgccgtggtcctggaagcccagggcgacgggctgtcg
gcgttcccctggaaccaccacccgctggtctacgtccgggtccgcaacaccggcgagacg
accaagccggtgaccgtcaccttcgacaccccgctcaagcagtggtggagcctgcgcggc
tttccctgcacgacgaccgacgagagcgcgagctgcacgacgaagagcgcggtggcgccg
ggccagcacgtcaacctgtgggtgcggctgctgggccgtcccaacgacggacgggtgacg
atcaacgcccagctcggccgggcgacggcaccgccggtgaccgtggacttcggctgctgg
cgccactggtgcggcaaggacccgctgcccacgccgacgaccccgtcggtccccacgacg
acgccgtccaagccgaagccgacgccgtcgaagcccacgccgaagccaccggtgacgacg
acggacaccgacgagccggcgagcgagccgccggtttcctcgaccacgacgagcgcacca
ccgcggtcgggcgggaacccgggggccaagccgccgacagtcagccccgggaaggttttc
ggctggctgacggggtag
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