Amycolatopsis mediterranei S699: RAM_06140
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Entry
RAM_06140 CDS
T01822
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RAM_06140 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amn01007
]
RAM_06140 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amn03016
]
RAM_06140 (lysS)
Enzymes [BR:
amn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RAM_06140 (lysS)
Amino acid related enzymes [BR:
amn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RAM_06140 (lysS)
Transfer RNA biogenesis [BR:
amn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RAM_06140 (lysS)
Prokaryotic type
Other AARSs
RAM_06140 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AEK39720
UniProt:
A0A9R0U6P0
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All DBs
Position
1277717..1281040
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AA seq
1107 aa
AA seq
DB search
MGNLASSRPRLPAWKAKAGGIAATVVQLAAVFSVILLFTGGPHGRVLNGIDMAFSGLSVP
TSESLIMVLLLVVLGAALRRRKKAALYTLVLFQVGGLLLTLALQATLLWSPDVLTLGPKQ
VRHIPAQLWVLTIADAVSVGLIVLLLALRPAFPARLAPSAWRDGLSMLFGGIAVVILVGW
GLTEAFPGHLGDTWERFAWVVNHATGENLQLRRIGVGEGPGWLDLFLDLSATAVATAALY
LLFRGVRSRALRTDEDELRLRRLLAEHGEDDSLGYFATRRDKSVVFAPNGRAAVTYRVLG
GTSVASADPVGDPEAWPDAVRAWLDETRTYGWTPGVLGASERGAKAYTGAGLRALEIGDE
AVLDVREFSLAGPERRSVRQAVKRIERAGYTSRVRRHGEIPEAEMTELLARAQAWRGAET
ERGFSMALGRLGDASDGRSVMVEAYDAHGELRGLLSFVPWGRRGLSLDLMRRDRDAENGL
NEYMIAETVAAAQVLGAQRISLNFAMFRAVFSEGERIGAGPVLRAWRGILSVFSRFFQLE
SLYRSNAKYGPDWEPRFLCYSSARRLPRVGIVAGALEGFVPTGRARSLRLETVSEDFVAR
VKEIEESAAAPAPKAWRRPEQVRVRIAKLDKLREAGIDPYPVGFRRDDHIGDVVAKYGDL
APDTTTGHRVRIAGRVLNLRILGGLCFARVKDFSGEIQLMLEAGELDLTRWRTGVDLGDH
VGVSGQVVTSKRGELSVLVDEWTVTAKCLHPLPDKRKGLTDPETRVRQRYLDLAVNPDST
NMLRLRSTVVRAVRDRLHHADYLEVETPMLQTVHGGANARPFVTHINAYDMRMYLRIAPE
LYLKRLCVAGVERVFELNRNFRNEGVDATHNPEFTMLEAYQAYADYDTMRTLTRELVQHA
AEAAYGAQVVRRPDADGKVVEYDISGDWPVVPVHEAVSARFGEEIDPGTPVAELRRLCVA
AGVPVGEDPSHGDLVLKAFEHLVEGATVLPTFYTDYPTDVSPLTRQHRVDPRLAERWDLI
AFGSEVGTAYTELTDPIEQRRRLEGQSLRAASGDVEAMELDEDFLLALEHGMPPTGGLGL
GVDRLLMMLTGASIRQTVLFPFVRPQA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacctcgcgagctcgcgccctcgcctccccgcctggaaggcgaaggcgggcggc
atcgccgcgaccgtggtccagctggccgcggtgttctccgtgatcctgctcttcaccggc
ggcccgcacggccgcgtgctcaacggcatcgacatggccttctccggcttgagcgtgccg
accagcgagagcctgatcatggtgctgctgctggtggtgctcggagccgccctgcgccgc
cgcaagaaggccgcgctgtacaccctggtgctgttccaggtcggcgggctgctgctcacg
ctggccctccaggcgaccctgctctggtcacccgacgtgctgaccctcggcccgaagcag
gtccggcacatccccgcgcagctgtgggtgctgaccatcgccgacgccgtctcggtcggg
ctgatcgtgctcctgctcgcgctgcgcccggcgttcccggcccgcctcgcgccgagcgcc
tggcgcgacggcctgagcatgctgttcggcggcatcgccgtggtcatcctggtcgggtgg
ggcctgaccgaggcgttccccggccacctcggcgacacgtgggagcgcttcgcctgggtc
gtcaaccacgccacgggcgagaacctgcagctgcgccggatcggcgtgggcgaagggccc
ggctggctggacctgttcctcgacctcagcgcgacggcggtcgccaccgcggcgctgtac
ctgctcttccgcggcgtgcgcagccgcgccctgcggaccgacgaggacgagctccgcctg
cgccggctgctcgccgaacacggcgaggacgactccctcggctacttcgccacccggcgc
gacaagagcgtcgtcttcgcgccgaacggccgcgcggcggtgacctaccgcgtcctcggc
ggcacgagcgtcgccagcgccgacccggtcggcgacccggaggcgtggcccgacgcggtc
cgggcgtggctcgacgagacgcgcacgtacggctggaccccgggcgtgctcggggcgagc
gaacgcggcgcgaaggcgtacaccggggcgggtctgcgtgccctggaaatcggcgacgaa
gcggtgctcgacgtccgcgagttcagcctggccggcccggagcggcgctcggtgcgccag
gccgtcaagcgcatcgagcgggccggctacacctcgcgggtccgccgccacggcgagatc
cccgaggccgagatgaccgagctgctcgcccgggcgcaggcctggcgcggcgccgagacc
gaacgcgggttctcgatggcgctgggccggctcggcgacgccagcgacggccgcagcgtg
atggtcgaggcctacgacgcccacggcgagctgcgcgggctgctgtcgttcgtcccgtgg
gggcgccgcgggctttcgctggacctcatgcgccgcgaccgcgacgccgagaacggcctc
aacgagtacatgatcgccgagacggtcgcggccgcgcaggtcctcggcgcgcagcggatc
tcgctcaacttcgcgatgttccgcgcggtgttctccgagggcgagcggatcggcgccggc
ccggtgctgcgggcctggcgtggcatcctcagcgtgttttcgcggttcttccagctggag
tcgctgtaccggtccaacgccaagtacgggccggactgggagccgcggttcctctgctac
tcctcggcccggcggctgccgcgggtcggcatcgtcgcgggcgcgctcgaagggttcgtc
ccgaccggacgggcgcggtcgctgcggctggagacggtcagcgaggacttcgtcgcgcgc
gtcaaggagatcgaggagtcggcggcggcaccggcgccgaaggcctggcggcggcccgaa
caggtccgcgtccgcatcgccaagctcgacaagctgcgcgaggccggcatcgacccgtac
ccggtcggtttccgccgcgacgaccacatcggggacgtcgtggcgaagtacggcgacctg
gcgccggacaccaccaccgggcaccgggtccggatcgccgggcgggtgctgaacctgcgc
atcctcggcggcctgtgcttcgcccgcgtcaaggacttcagcggcgagatccagctgatg
ctggaggccggcgagctggacctgacccgctggcggaccggcgtcgacctcggcgaccac
gtcggcgtcagcggccaggtcgtgacgtcgaagcgcggcgagctttcggtgctcgtcgac
gagtggacggtcaccgcgaagtgcctgcacccgctgcccgacaagcgaaagggcctcacc
gacccggagacgcgggtccggcagcgctacctcgacctggcggtcaacccggactcgacg
aacatgctgcggctgcggtccaccgtggtccgcgcggtgcgcgaccggctgcaccacgcc
gactacctcgaggtcgagacgccgatgctgcagacggtgcacggcggcgccaacgcccgg
ccgttcgtcacccacatcaacgcctacgacatgcggatgtacctgcggatcgcgcccgag
ctgtacctgaagcggctgtgcgtggccggcgtcgagcgggtcttcgagctcaaccgcaac
ttccgcaacgaaggcgtcgacgcgacgcacaaccccgagttcacgatgctcgaggcgtac
caggcgtacgcggactacgacacgatgcggacgctgacccgcgaactggtccagcacgcg
gccgaagcggcgtacggggctcaggtcgtccggcggcccgacgccgacgggaaggtcgtc
gagtacgacatctccggcgactggccggtcgtgccggtccacgaagccgtctcggcgagg
ttcggcgaggagatcgacccggggacgccggtggccgagctgcgccgcctgtgcgtggcc
gccggggtgccggtgggggaggacccgagccacggcgacctcgtgctcaaggcgttcgag
cacctcgtcgagggcgcgaccgtgctgccgacgttctacaccgactacccgaccgacgtc
tcgccgctgacccgccagcaccgggtggacccgcggctggccgaacgctgggacctcatc
gcgttcgggtcggaggtcggcacggcctacaccgagctgaccgacccgatcgagcagcgg
cggcggctggaagggcagtcgctgcgcgcggccagcggtgacgtcgaggcgatggagctg
gacgaagacttcttgctcgccttggagcacgggatgccgccgaccggcgggctcggcctg
ggcgtcgaccggctgctcatgatgctcaccggtgcctccatccgccagacggtcctgttc
cccttcgtccgaccgcaggcataa
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