KEGG   Amycolatopsis mediterranei S699: RAM_08760
Entry
RAM_08760         CDS       T01822                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
amn  Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:amn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amn03032]
    RAM_08760
   03036 Chromosome and associated proteins [BR:amn03036]
    RAM_08760
   03400 DNA repair and recombination proteins [BR:amn03400]
    RAM_08760
DNA replication proteins [BR:amn03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RAM_08760
Chromosome and associated proteins [BR:amn03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RAM_08760
DNA repair and recombination proteins [BR:amn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RAM_08760
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AEK40242
UniProt: A0A9R0NTC0
LinkDB
Position
1851433..1852218
AA seq 261 aa
MANKAQLIEALTERLGDKKAASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGEAVRVKKTNVPAFRAGTTFKDVISGAKKLPKATPVKRTPTATRAAATTTTRATT
PRATTSRTAAAAPKPATTRSTTTRTRATAAKPATTRTPAAKPATTRAKAAPKTTAAKTTA
AKAAPPAKAATAAKTTVAKATTAAKSAAAKAATAAKTTAAKAATAAKPTTARKTSAARTP
AAKTTAAKTPARRTSAAAKKD
NT seq 786 nt   +upstreamnt  +downstreamnt
atggccaacaaggcccagctgatcgaggcgctgaccgagcgcctgggcgacaagaaggcc
gcttccgaggcggtcgacggtctggtcgacatcatcatccggacggtcaacaagggcgaa
aaggtcaacatcaccggcttcggggtgttcgagaagcgcgcccgtgccgcgcggacggct
cgcaacccgcgcaccggtgaggccgtccgcgtcaagaagaccaacgtgcccgccttccgc
gcggggaccacgttcaaggacgtcatttcgggagcgaagaagctgccgaaggcgaccccg
gtcaagcgcacaccgacggccacccgagcggcggcgaccacgacgacgcgcgcaaccacg
ccccgcgcaaccacgtcccgcaccgcggcggcggctccgaagccggccaccacgcggtcg
acgaccacgcgaacccgcgcaacggcggcaaagccggccacgacgaggacaccggcggcc
aagccggcaaccacccgcgccaaggcggcgccgaagacgacggcggcgaagaccacggcg
gcgaaggcggccccgcccgcaaaggcggccacggcggcgaagaccacggtggcgaaggcg
accacggctgcgaagagcgcggccgcgaaggccgctacggcggcgaagaccaccgccgcg
aaggcagccacggccgcgaagccgactacggctcgtaagacctcggcggcccggaccccg
gcggccaagaccaccgcggccaagaccccggcaaggcggacctcggccgcggcgaagaag
gactga

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