Amycolatopsis mediterranei S699: RAM_09440
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Entry
RAM_09440 CDS
T01822
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00362
Benzoate degradation
amn00624
Polycyclic aromatic hydrocarbon degradation
amn01100
Metabolic pathways
amn01120
Microbial metabolism in diverse environments
amn01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RAM_09440
00624 Polycyclic aromatic hydrocarbon degradation
RAM_09440
Enzymes [BR:
amn01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RAM_09440
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AEK40378
UniProt:
A0A9R0U789
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Position
1993332..1994069
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AA seq
245 aa
AA seq
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MATPTEFRLPRYGEDPEGTHPPLDFSGYGSTALRHPKQDLVLLPQMLTEVTGPLLGPGRL
GEHDNDLTRQHAGEPQGQRIIVTGRLLDGEGRPVRDSLVEIWQANAGGRYRHTGDRWPSP
LDPNFDGVGRTLTDSDGRYTFTTIKPGAYPWKNHDNAWRPAHIHFSVFGSAFTQRLVTQM
YFPDDPLFSQDPIFNSIPDEKARQRMVSRYDHDITQAEWALGFQFDIVLRGRDASVFEEE
EEDED
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtggctactccgaccgaattcaggctgccgcgctacggggaagaccccgaaggcacccac
ccgcccctcgacttcagcggctacggctccacggcgctgcggcacccgaagcaggacctc
gtcctgctgccacagatgctgaccgaggtcaccggcccgctgctcgggcccggccgcctc
ggtgagcacgacaacgacctcacccggcagcacgcgggcgaaccgcagggccagcgcatc
atcgtcaccgggcgcctcctcgacggcgaaggccgtccggtgcgtgactccctggtggag
atctggcaggcgaacgcgggcggccgctaccggcacaccggcgaccgctggccgtccccg
ctcgatccgaacttcgacggcgtcggccgcaccctgaccgacagcgacggccgctacacc
ttcaccaccatcaagcccggcgcctacccgtggaagaaccacgacaacgcctggcgcccg
gcgcacatccacttctcggtgttcggctcggcgttcacccagcggctggtcacccagatg
tacttcccggacgacccgctgttctcccaggacccgatcttcaactcgatcccggacgag
aaggcccggcagcggatggtctcgcgctacgaccacgacatcacgcaggccgagtgggcg
ctcgggttccagttcgacatcgtgttgcgcgggcgcgacgcgtcggtgttcgaagaggaa
gaggaggacgaagactga
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