Amycolatopsis mediterranei S699: RAM_11965
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Entry
RAM_11965 CDS
T01822
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00020
Citrate cycle (TCA cycle)
amn00190
Oxidative phosphorylation
amn00650
Butanoate metabolism
amn00720
Other carbon fixation pathways
amn01100
Metabolic pathways
amn01110
Biosynthesis of secondary metabolites
amn01120
Microbial metabolism in diverse environments
amn01200
Carbon metabolism
Module
amn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amn_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RAM_11965 (sdhA)
00650 Butanoate metabolism
RAM_11965 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RAM_11965 (sdhA)
00720 Other carbon fixation pathways
RAM_11965 (sdhA)
Enzymes [BR:
amn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RAM_11965 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
GIDA
Thi4
NAD_binding_8
FAD_oxidored
AlaDh_PNT_C
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AEK40883
UniProt:
A0A9R0NUI7
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All DBs
Position
2510115..2512031
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AA seq
638 aa
AA seq
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MTEVERHSYDVVVIGAGGAGLRAVIEARERGFRVAVVCKSLFGKAHTVMAEGGCAASMGN
ANSNDNWQVHFRDTMRGGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTADGRISQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAETGDYEAKIKVFAECTVTELLTT
DGKIAGAFGYWRESGRFILFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGAKL
INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSDGKRFMFEYVPDVFKGQYAESE
EEADRWYADADNNRRTPDLLPRDEVARAINSEVKEGRGSPHGGVFLDIASRLPAEEIKKR
LPSMYHQFKELADVDITAEPMEVGPTCHYVMGGIEVDPDTAAASVPGLFAAGECSGGMHG
SNRLGGNSLSDLLVFGRRAGLGAAEYVLGLDGRPAVSESDVDAAAKMALAPFDPPSGASA
ENPYTLHTELQQSMNDLVGIIRKAGEIEQALVKLAELRQRILRVTVEGHRQFNPGWHLAI
DLRNMLMVSECVAKAALTRTESRGGHTRDDYPGMDAEWRHKLLVCSAAEGDNPVVPDIDV
VVKEQVPLRQDLLELFEFGELGKYYTDDELEAHPGSKA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggtcgaacggcacagctacgacgtggtggtgatcggtgccggtggcgccggt
ctgcgcgccgtgatcgaagcccgcgaacgcggcttccgcgtcgcggtcgtgtgcaagtcc
ctgttcggcaaggcgcacacggtgatggccgagggcggctgcgcggcctcgatgggcaac
gcgaactcgaacgacaactggcaggtccacttccgcgacaccatgcgcggcgggaagttc
ctcaacaactggcggatggccgagctgcacgccaaggaggcgccggatcgcgtctgggaa
ctcgagacgtacggcgcgctcttcgaccgcaccgccgacggccggatcagccagcgcaac
ttcggcgggcacacctacccgcggctggcgcacgtcggtgaccgcaccgggctcgagctc
atccgcacgatgcagcagaagatcgtctcgctgcagcaggaggacttcgccgagaccggg
gactacgaagcgaagatcaaggtcttcgccgagtgcacggtcaccgagctgctcaccacc
gacgggaagatcgccggcgcgttcggctactggcgcgagagcgggcggttcatcctcttc
gaggcgcccgcggtcgtgctggccaccggcggcatcggcaagtcgttcaaggtgacgtcg
aactcgtgggagtacaccggtgacggccacgcgctggccctgcgggcgggcgcgaagctg
atcaacatggagttcgtccagttccacccgaccgggatggtctggccgccgagcgtcaag
ggcatcctcgtcaccgagggcgtgcgcggtgacggcggcgtgctcaagaactccgacggc
aagcggttcatgttcgagtacgtgcccgacgtgttcaagggccagtacgccgaaagcgaa
gaagaagccgaccgctggtacgccgacgcggacaacaaccggcgcacacccgacctgctg
ccccgcgacgaggtggcccgcgcgatcaactccgaggtcaaggagggccgcggctccccg
cacggcggcgtcttcctcgacatcgccagccggctgccggccgaggagatcaagaagcgg
ctgccgtcgatgtaccaccagttcaaggagctggcggacgtcgacatcaccgcggagccg
atggaggtgggcccgacctgccactacgtcatgggcggcatcgaggtcgacccggacacg
gccgcggcgagcgtgcccggcctgttcgcggccggcgagtgctcgggcggcatgcacggc
tcgaaccggctcggcggcaattcgctgtcggacctgctggtgttcggccgccgcgcagga
ctcggtgccgccgagtacgtgctcggcctcgacggcaggcccgccgtctcggagtccgat
gtggacgctgcggcgaagatggcgctcgcgccgttcgacccgccgtccggtgcctcggcg
gagaacccgtacaccctgcacaccgagctgcagcagtcgatgaacgacctggtcggcatc
atccgcaaggcgggcgagatcgagcaggcgctggtgaagctcgccgagctgcggcagcgg
atcctgcgcgtcacggtggaaggccaccggcagttcaaccccggctggcacctcgcgatc
gacctgcgcaacatgctgatggtcagcgagtgcgtcgcgaaggcggcgctgacgcggacc
gagagccgtggcgggcacacgcgcgacgactaccccggcatggacgccgagtggcgccac
aagctgctggtgtgctcggcggccgagggcgacaacccggtcgtcccggacatcgacgtc
gtggtgaaggagcaggtgccgctgcggcaggacctgctggagctgttcgagttcggcgaa
ctcgggaagtactacaccgacgacgaactcgaggcgcaccccgggagcaaagcatga
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