Amycolatopsis mediterranei S699: RAM_25025
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Entry
RAM_25025 CDS
T01822
Name
(GenBank) adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAM_25025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amn03000
]
RAM_25025
03400 DNA repair and recombination proteins [BR:
amn03400
]
RAM_25025
Enzymes [BR:
amn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RAM_25025
Transcription factors [BR:
amn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RAM_25025
DNA repair and recombination proteins [BR:
amn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAM_25025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AEK43483
UniProt:
A0A9R0UA85
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All DBs
Position
complement(5435709..5437148)
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AA seq
479 aa
AA seq
DB search
MRAVQAKDARFDGWFYTAVLTTKIYCRPSCPVVPPKPRNMSFYPSAAAAQQAGFRACKRC
RPDASPGSPLWNERADLVARAMRLIADGVVDTEGVRGLAARLGYSVRQVERQVFAELGAG
PLALARAQRAQTARTLIETTTLPMTELALAAGFGSIRTFNDTVREVFALSPTELRSRAKG
TPQAAAGALVLRLPYRKPLCPDNLFGHLVATGVPGVEEWRDGAYRRTLRLPHGHGVVALR
PEDGHIACRLTLADLRDLPAATSRCRRLLDLDADPVAVDDQLATDPLLAPLVAAAPGRRV
PRTADGAEFAVRAVLGQQVSTAAARTHAARLVVAHGEPVDDPEGGLTHLFPSPEALASLD
PETLAMPRSRRRTLLGLVSALADGLDLSAGSDWEAARAALGALPGFGPWTVESIAMRALG
DPDAFLPTDLGIKYAAEMLGLGGPAAVVARSAAWRPWRAYATQHLWATGDHAINRMPAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggccgtgcaggcgaaggacgcccggttcgacgggtggttctacaccgccgtcctg
acgacgaagatctactgccggcccagctgcccggtggtcccgcccaagccgcggaacatg
agtttttacccgagcgccgcggccgcccagcaggccgggttccgggcctgcaagcgctgc
cgcccggacgcgagccccggctcgccgctgtggaacgagcgtgccgacctggtcgcccgg
gcgatgcggctgatcgccgacggcgtcgtcgacaccgaaggcgtccgcggcctcgccgcc
cgcctcggctacagcgtccggcaggtcgaacggcaggtcttcgccgaactcggcgccggc
ccgctggctctggcccgggcccagcgcgcgcagaccgcgcgcaccctgatcgagacgacc
acgctgccgatgaccgagctggccctggccgccgggttcggcagcatccggacgttcaac
gacaccgtccgcgaggtgttcgccctgtcgccgaccgagctgcgcagccgcgcgaagggc
acgccgcaggccgcggccggagccctcgtgctgcggctgccctaccggaagccgctgtgc
ccggacaacctcttcgggcacctggtggcgaccggcgtgccgggcgtggaggagtggcgg
gacggcgcctaccggcggacgctgcggttgccccacggccacggcgtcgtcgcgctgcgg
cccgaagacggccacatcgcctgccggctcaccctggccgatctgcgggacctgcccgcc
gccaccagccggtgccgccggctgctcgacctcgacgccgacccggtcgccgtcgacgac
cagctcgccaccgacccgctgctcgcgccgctggtcgcggccgcgcccggccgccgggtc
ccgcgcacggccgacggcgccgagttcgccgtgcgggccgtgctgggccagcaggtctcg
acggcggcggcgcggacccacgcggcgcggctcgtggtcgcgcacggcgaaccggtcgac
gaccccgaaggcggcctgacccacctgttcccctcgccggaggcgctcgcttcgctggac
cccgaaaccctggccatgccgcgcagccgccgtcgcacactgctcgggctggtctcggcg
ttggccgacggcctggacctcagcgcgggcagcgactgggaagcggcccgggccgcgctg
ggcgcgttgcccggcttcgggccgtggacggtcgagagcatcgcgatgcgcgctctcggc
gacccggacgcgttcctcccgaccgatctcggcatcaagtacgcggcggaaatgctgggc
ctcggcggcccggccgccgtcgtggcccggtccgcggcgtggcgcccctggcgcgcctac
gccacccagcacctgtgggccaccggagaccacgcgatcaaccggatgcccgcggcatga
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