KEGG   Amycolatopsis mediterranei S699: RAM_26515
Entry
RAM_26515         CDS       T01822                                 
Name
(GenBank) DNA end-binding protein Ku
  KO
K10979  DNA end-binding protein Ku
Organism
amn  Amycolatopsis mediterranei S699
Pathway
amn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:amn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    RAM_26515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amn03400]
    RAM_26515
DNA repair and recombination proteins [BR:amn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RAM_26515
SSDB
Motif
Pfam: Ku Rho_N CPSase_L_D3
Other DBs
NCBI-ProteinID: AEK43780
UniProt: A0A9R0P044
LinkDB
Position
complement(5776687..5777619)
AA seq 310 aa
MARPVWSGALSLGLVTVPVELYPAVADHTIHFHQFERGTADRIRNRRVNERTGEEVTQGE
IVKGYDLGGGDHVLVEPDELDEIAPERSRRIDIEQFVELDEIDPWFFDKTYWLKPAKEDF
AKAYGLLLQAMDRSEKAGVAKFVLRGKEYLAAVRAGEGVMVLNTLHFVADLRKPKDVMGK
LPEVPKPRPKELDMALALVDEMTAPWKPEDYRDEYSQRVEELIKAKEAGKEIAHEEEPEP
SADVVDLFEALSRSVKNRKSGGKEPKKKAAKKPELAELSKSDLDKLAREQGVKGRSKMTR
AQLEKALKAS
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcccgaccggtgtggagcggcgcactgagcctggggctggtcaccgtgccggtggag
ctgtacccggcggtggcggaccacacgatccacttccaccagttcgaacgcggcacggcg
gaccggatccgcaaccgccgcgtcaacgaacggaccggcgaggaggtcacccagggcgag
atcgtcaagggctacgacctcggcggcggcgaccacgtgctggtcgaaccggacgaactg
gacgagatcgcgcccgagcggtcgcgccggatcgacatcgagcagttcgtcgagctcgac
gagatcgacccgtggttcttcgacaagacctactggctcaagccggcgaaggaggacttc
gccaaggcgtacggcctgctgctgcaggcgatggaccgcagcgaaaaggccggcgtcgcg
aagttcgtgctgcgcggcaaggagtacctcgccgccgttcgcgccggtgaaggcgtcatg
gtgctcaacacgctgcacttcgtcgccgacctgcggaagccgaaggacgtcatgggcaag
ctgccggaggtgccgaaaccccggccgaaggagctcgacatggcgctggcgctggtcgac
gagatgaccgctccctggaaaccggaggactaccgcgacgagtactcccagcgcgtcgaa
gagctgatcaaggccaaggaagccggcaaagagatcgctcacgaagaggagccggagccc
tcggccgacgtggtggacctgttcgaggcgctgtcgcgcagcgtgaagaaccgcaagagc
ggcggcaaggaacccaagaagaaggcggcgaagaaacccgagctcgccgagctgtcgaag
tccgatctcgacaagctggcccgggaacagggcgtgaagggccggtcgaagatgacgcgc
gcccagctggagaaggcgctgaaggcgtcgtga

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