Amycolatopsis mediterranei S699: RAM_26515
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Entry
RAM_26515 CDS
T01822
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RAM_26515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amn03400
]
RAM_26515
DNA repair and recombination proteins [BR:
amn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RAM_26515
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
CPSase_L_D3
Motif
Other DBs
NCBI-ProteinID:
AEK43780
UniProt:
A0A9R0P044
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Position
complement(5776687..5777619)
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AA seq
310 aa
AA seq
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MARPVWSGALSLGLVTVPVELYPAVADHTIHFHQFERGTADRIRNRRVNERTGEEVTQGE
IVKGYDLGGGDHVLVEPDELDEIAPERSRRIDIEQFVELDEIDPWFFDKTYWLKPAKEDF
AKAYGLLLQAMDRSEKAGVAKFVLRGKEYLAAVRAGEGVMVLNTLHFVADLRKPKDVMGK
LPEVPKPRPKELDMALALVDEMTAPWKPEDYRDEYSQRVEELIKAKEAGKEIAHEEEPEP
SADVVDLFEALSRSVKNRKSGGKEPKKKAAKKPELAELSKSDLDKLAREQGVKGRSKMTR
AQLEKALKAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaccggtgtggagcggcgcactgagcctggggctggtcaccgtgccggtggag
ctgtacccggcggtggcggaccacacgatccacttccaccagttcgaacgcggcacggcg
gaccggatccgcaaccgccgcgtcaacgaacggaccggcgaggaggtcacccagggcgag
atcgtcaagggctacgacctcggcggcggcgaccacgtgctggtcgaaccggacgaactg
gacgagatcgcgcccgagcggtcgcgccggatcgacatcgagcagttcgtcgagctcgac
gagatcgacccgtggttcttcgacaagacctactggctcaagccggcgaaggaggacttc
gccaaggcgtacggcctgctgctgcaggcgatggaccgcagcgaaaaggccggcgtcgcg
aagttcgtgctgcgcggcaaggagtacctcgccgccgttcgcgccggtgaaggcgtcatg
gtgctcaacacgctgcacttcgtcgccgacctgcggaagccgaaggacgtcatgggcaag
ctgccggaggtgccgaaaccccggccgaaggagctcgacatggcgctggcgctggtcgac
gagatgaccgctccctggaaaccggaggactaccgcgacgagtactcccagcgcgtcgaa
gagctgatcaaggccaaggaagccggcaaagagatcgctcacgaagaggagccggagccc
tcggccgacgtggtggacctgttcgaggcgctgtcgcgcagcgtgaagaaccgcaagagc
ggcggcaaggaacccaagaagaaggcggcgaagaaacccgagctcgccgagctgtcgaag
tccgatctcgacaagctggcccgggaacagggcgtgaagggccggtcgaagatgacgcgc
gcccagctggagaaggcgctgaaggcgtcgtga
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