Amycolatopsis mediterranei S699: RAM_26555
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Entry
RAM_26555 CDS
T01822
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amn03021
]
RAM_26555
Transcription machinery [BR:
amn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAM_26555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
HTH_3
Sigma70_ECF
HTH_Crp_2
HTH_31
MarR_2
MarR
DUF7343
HTH_IclR
KORA
HTH_AraC
GerE
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AEK43788
UniProt:
A0A9R0P008
LinkDB
All DBs
Position
5781733..5782524
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AA seq
263 aa
AA seq
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MSSERKTLLHRPDEYAHCEPLFQELGSLDTADPRRDVVRSKLVTELLPLAEHIATRFSGR
GEPREDLVQVARIGLINAVDRFDPARGHDFLSFAVPTIMGEVRRHFRDTGWSVRVPRRLK
ELHLSLSQGSAVLSQRLGRAPTPTELAEHLNLDVDEVREGLLAGNAYQALSVDKPVHDDA
EALSLADTMGEPDHEMAMVENHEALQPLLQELPKRERAILVMRFFGGLTQTQIADRVGIS
QMHVSRLLSQTLEQLRGKLTGEG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgagcggaaaaccctcctccaccgcccggacgaatacgcccactgcgaaccg
ctgttccaggaactgggcagcctcgacaccgctgatccgcgccgggacgtcgtccggagc
aagctcgtcaccgagctgctcccgctggccgagcacatcgcgacccggttctccggccgc
ggcgagccccgcgaagacctggtccaggtggcgcggatcggcctgatcaacgccgtcgac
cggttcgaccccgcccgggggcacgacttcctgtccttcgcggtgccgaccatcatgggc
gaggtccgccggcacttccgcgacaccggctggtccgtccgggtgccccggcggctcaag
gagctgcacctttcgctgagccagggctcggcggtgctctcccagcgcctgggccgtgcc
ccgacgccgaccgagctggccgagcacctgaacctcgacgtcgacgaggtccgcgaaggt
ctgctcgcgggcaacgcctaccaggcgctctcggtcgacaagccggtgcacgacgacgcc
gaggcgttgtcgctggccgacaccatgggggaaccggaccacgagatggccatggtcgag
aaccacgaggccctccagccgctgctgcaggaactgccgaagcgcgaacgcgcgatcctg
gtgatgcggttcttcggcgggctcacgcagacccagatcgccgaccgcgtcgggatctcc
cagatgcacgtctcccggctgctgtcgcagaccctggagcagctgcgcgggaagctcacg
ggcgagggctag
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