Amycolatopsis mediterranei S699: RAM_26660
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Entry
RAM_26660 CDS
T01822
Name
(GenBank) RHS repeat-containing protein
Organism
amn
Amycolatopsis mediterranei S699
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
T7SS_signal
PPE
WXG100
EspA_EspE
OCRE
HAP
DUF6693
Motif
Other DBs
NCBI-ProteinID:
AEK43809
UniProt:
A0A9R0UAD3
LinkDB
All DBs
Position
complement(5800989..5805848)
Genome browser
AA seq
1619 aa
AA seq
DB search
MVNPLVAETKDSTKAYSGISLLESANDLKSAIESGDWASVAMGAVGTALDALSMAMDPFG
AILAAGVGWLMEHVGPLKEALNGLTGNADEIAAQSETWKNVATELGSIGEDLTGMVKADT
VSWTGNAADTYRQRAQDTVTLLETAQKGCEGASSGVKTAGEVVAAVRALVRDIIAELVGH
LISWALQVVFTLGIGLTWVVPQVVGAVAKVASKIADLVKRLVTALKALIPLLKRAGDLFA
DAAKALRKIKPGKAAPPPKHADIKSGPKDIGGPNGKGGPDAPPPKTDGTSPSGAKGDGTT
TSGAKTDPPPKTDPPPASKGPDDNPKGPDPTPNGGSTTPSGAGKGDGGKGGGSSNKPDNP
RDRGVGPDDRVCKSDPVDVANGDVVLEQRDLELPDALVLDRTHISSYRAGLWFGPTWTST
VDQRLELDDEHVCYFSADGLILVYPHAEPGVPVLPLEGPRRPLTRTATGYTLHDPLARRT
LTFAPLPGRGGALQPLQQVEDAGGAVISCAYTPSGAPARLTHSAGYEVALTTDRGRVVAV
DVVDGDTGYRVRAVRYDYDPRGRLVAVVDSSDTPVRFEYDDAGRITGWHDRNGVWYRYVY
DAAGRCVVTVGDGGFLDGRFAYDPAQRVTRFTDSLGHTSEHHFNELGQLVRDIDPLGAVT
AYTWDRYDRMLSRTDPLGHTTLFEHGEAGELRAVVRPDGSRVALTRHLDGAWDIAVEAAG
RVWRRHYPAGSAPDPYTTLPGIADGSAEEALSPDEPGTAAATAAELRERGDGTDLFGRPK
AVVDAGGRSALRWSVEGKLLARTTPAGVQEVWRYDRQGNELGHTGLLGQAEAREYGPFDL
LTAVTDPTGARTAYTYDTELRLVAVTNPAGLTWHYTYDPAGRLAAESDFDGRVTRYTHDA
AGRLVRSEAGGLVVEYAYDVLGNVVSRRTADELTTFAHDPVGRLAGAANAESRVDIERDD
QGRVLTHTVDGRTISFGYDDENHLVHRRTPSGVDSVWRFDPDGVPVALQTAGQSIRFGHE
GGAETRRVFGDVVLEQAYAGERLTGQAVTVAGRRVHSRGYDYRPDGELAVVDDDVTGPVR
YQLDAAGRVTAVAGPNRAEQYRYDGAGNITGTARERRFYTGTRLTASDTTAYEYDAHGRL
VSRRDASGAVWHYTWNALGRLTGVVTPDGSHWRYRYDPLGRRTAKQRIVAGQGGAPVVAE
QVLFSWDGTTLVEEQAGTRVTTWEYHPDDGKPLAQLASGRLATIVTDQVGSPIELVDAAG
ALLWRGEADLWGNPVLPQETVSPQEQAGTPLRFPGQYRDAETGLHYNVYRYYDPATARYL
SPDPLGLEPAPNPVAYVANPLLAADPLGLTATVSPCGKVSDKAPPKRQRSEDDSTNASGS
GSSKKPKTGQDFKPGDIVNDDLKDPAIDKYKNFPKDDPNNPLGRRLKDSEGKTKVKRSED
VGEAGAHDYLKKVTGKDDLDMITPTKANPLPAGKYGTKPGEPWPNAVAFNGNNVADVAYW
DGKTMHVVEAKGNGSTLTGGPMHGRVQKFDPDTGAPVPPANRPNEHRMDQGSTEYLKDVA
ANMKNSKPENATYDGRGEVGTSIWNAIHNGHPPVKYVPVNTTVGPDGKAVVKVTPGYGE
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaatccgctggtcgcggagacgaaggattccacgaaggcgtattcgggcatttcg
ctcttggagtcggcgaatgacttgaagtcggcgatcgagagcggtgactgggcgtcggtc
gcgatgggtgcggtcgggacggcgttggatgcgttgtcgatggcgatggatccgttcggg
gcgatcctcgctgccggggtcgggtggctgatggagcacgtcggtccgctcaaggaggcc
ttgaacggtctgaccggcaatgccgatgagattgctgcgcaatcggagacgtggaagaac
gtcgcgaccgagctgggcagcatcggggaagacctgactggcatggtcaaggccgacacg
gtgtcttggactgggaacgcggcggacacttaccggcagcgggcgcaggacacggtgacg
ctgctggagactgcgcagaagggctgtgagggtgcttcgagcggggtgaagaccgcgggt
gaggtggtcgcggcggtccgggcgctggtgcgggacatcattgctgagctggtcgggcat
ttgatcagctgggcgttgcaggtggtgttcaccttggggatcgggttgacctgggtggtg
ccgcaggtggtcggcgcggtggcgaaggtggcgtcgaagatcgcggatttggtgaagcgg
ttggtgacggcgttgaaggcgctgattccgctgttgaagcgggcgggtgatctgttcgcg
gacgcggcgaaggcgttgcggaagatcaagccgggtaaggctgcgccgccgccgaagcac
gcggatatcaagagtgggccgaaggacatcggtggtcccaatgggaagggcggcccggac
gcgccaccgccgaagaccgacggcaccagtccctcgggcgccaaaggcgacggcacgacg
acctccggcgcgaagaccgacccaccgcccaagaccgacccgccaccggcgtcgaagggt
cccgacgacaaccccaagggcccggacccgacgcccaacggcggctcgaccacgccctcg
ggtgcgggcaagggcgacggcggcaagggcgggggctcgtcgaacaagccggacaacccg
cgcgaccgcggcgtcggcccggacgaccgcgtctgcaagtccgacccggtcgacgtcgcg
aacggggacgtcgtgctggaacagcgcgacctcgagctgccggatgccctcgtgctcgac
cgcacgcacatctcgtcctaccgggccgggctgtggttcggtccgacgtggacgtccact
gtggaccagcggctcgagctcgacgacgagcacgtctgctacttctccgccgacggcctg
atcctggtgtacccgcacgccgagcccggcgtcccggtgctgccgctggaaggaccgcgg
cggccgctgacccgcacggcgaccggctacacgctgcacgaccccctggcccggcgcacg
ctcaccttcgcgccgctgcccggccgcggcggcgcgctgcagccgctgcagcaggtcgaa
gacgccggcggcgccgtcatttcgtgtgcctacacgccttccggcgcgccggcgcgcctg
acgcactcggcgggctacgaggtggccctcaccaccgaccgcggccgcgtggtggcggtg
gacgtcgtcgacggcgacaccggctaccgcgtccgcgccgtgcgctacgactacgacccg
cgcgggcggctggtcgccgtggtcgactcgtcggacacgccggtccggttcgaatacgac
gacgccggccggatcaccggctggcacgaccgcaacggcgtctggtaccgctacgtctac
gacgccgcggggcgctgcgtggtcaccgtcggggacggcggtttcctcgacggccggttc
gcctacgaccccgcccagcgggtcaccaggttcaccgactcgctcggccacaccagcgaa
caccacttcaacgagctcggccagctcgtgcgcgacatcgacccgctcggcgcggtcacg
gcgtacacgtgggaccgctacgaccgcatgctgagccggaccgacccgctcggccacacg
acgctgttcgagcacggcgaagccggcgaactgcgggcggtcgtgcggcccgacggcagc
cgcgtcgccctcacccggcacctcgacggcgcctgggacatcgcggtcgaggccgccggc
cgcgtttggcgtcgccactacccggccggcagcgcgcccgatccgtacaccacgctgccc
ggcatcgccgacggttccgccgaagaagccttgagcccggacgagcccggcaccgcggcg
gccaccgccgccgagctgcgcgagcgcggcgacggcaccgacctgttcggccgccccaag
gccgtcgtcgacgcgggcgggcggtccgcgctgcgctggagcgtcgaaggcaagctgctg
gcccggaccacgccggccggggtgcaggaggtctggcgctacgaccggcagggcaacgaa
ctcggccacaccggcctgctcggccaggccgaagcccgcgaatacgggccgttcgacctg
ctgaccgcggtcaccgacccgaccggcgcgcggacggcgtacacctacgacaccgagctg
cggctggtcgcggtgaccaacccggccgggctgacctggcactacacctacgacccggcc
gggcgcctcgccgccgagtccgacttcgacggccgggtgacccgctacacccacgacgcc
gccgggcgcttggtgcgctcggaggccggcggcctggtcgtcgagtacgcctacgacgtc
ctcggcaacgtcgtctcgcgccgcacggccgacgagctcaccacgttcgcccacgacccg
gtcggccggctcgccggcgcggcgaacgccgagtcccgagtggacatcgaacgcgacgac
caaggtcgcgtgctcacccacaccgtcgacggccgcacgatttcgttcggctacgacgac
gaaaaccacctcgtgcaccgccgcacaccgtccggagtggacagtgtatggcggttcgac
ccggacggtgtcccggtcgcgctgcagaccgccggccagtcgatccgcttcgggcacgag
ggcggcgccgaaacccggcgcgtcttcggtgacgtcgtgctcgaacaggcctacgcgggg
gagcgcctcaccggccaggccgtgacggtcgccgggcggcgcgtgcactcgcgcggttac
gactaccggcccgacggcgagctcgccgtcgtcgacgacgacgtgaccggcccggtgcgc
taccagctcgacgccgccggccgggtcaccgcggtcgccggcccgaaccgcgccgagcag
taccgctacgacggcgccggcaacatcaccggcaccgcgcgggaacgccggttctacacc
ggcacccggctgacggcgtcggacaccaccgcctacgaatacgacgcccacggcaggctc
gtgtcccgccgggacgcctcgggcgctgtgtggcactacacgtggaacgccctcggccgg
ctcaccggcgtcgtcacaccggacggcagccactggcgctaccggtacgacccgctcggc
cggcgcaccgcgaaacagcggatcgtcgcgggccagggcggtgctccggtggtggccgag
caggtgctgttcagctgggacggcaccaccctcgtcgaggaacaggccggcacccgggtc
accacctgggaataccacccggacgacggaaaacccctggcgcagctggcttccggccgg
ctggccacgatcgtcaccgaccaggtgggctcgccgatcgagctcgtcgacgcggccggt
gcgctgctgtggcgcggcgaggcggacctgtggggcaaccctgtgctcccccaagagaca
gtgtcccctcaagagcaggccggcacgccgctgcgcttccccggccagtaccgcgacgcc
gagaccggactgcactacaacgtctaccgctactacgacccggcgaccgcgcggtacctc
agcccggacccgctgggtctcgaacccgccccgaacccggtcgcctacgtggcgaacccg
ctcctcgcggccgacccgctggggctcacggcgacggtgtccccgtgcgggaaggtcagc
gacaaggcgcccccgaagcgccagcggtccgaggacgactcgacgaacgcgtccggctcc
ggctcgagcaagaagccgaagaccggccaggacttcaagcccggggacatcgtcaacgac
gacctcaaggacccggcgatcgacaagtacaagaacttcccgaaggacgacccgaacaac
ccgctcggcaggcgcctgaaggactccgagggcaagacgaaggtcaagcggtccgaggac
gtcggcgaggccggggcgcacgactacctgaagaaggtcaccggcaaggacgacctcgac
atgatcacgccgacgaaggccaacccgctgccggcgggcaagtacggcaccaagccgggc
gagccgtggccgaacgcggtcgccttcaacggcaacaacgtcgccgacgtcgcctactgg
gacggcaagaccatgcacgtcgtcgaggcgaagggcaacgggtcgacgctgacgggcggc
ccgatgcacggccgcgtgcagaagttcgacccggacaccggcgccccggtgccgcccgcg
aaccggcccaacgaacaccggatggaccagggcagcacggaatacctcaaggacgtcgcc
gcgaacatgaagaacagcaagccggagaacgcgacctacgacggccggggcgaggtcggg
acctcgatctggaacgccatccacaacggccatccgccggtgaagtacgttccggtcaac
acgacggtcggcccggacggcaaggcggtcgtcaaggtgacgccggggtacggggagtag
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