Amycolatopsis mediterranei S699: RAM_31180
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Entry
RAM_31180 CDS
T01822
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RAM_31180 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amn03400
]
RAM_31180 (uvrA)
DNA repair and recombination proteins [BR:
amn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAM_31180 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RAM_31180 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
AAA_16
AAA_21
RsgA_GTPase
APS_kinase
AAA_25
nSTAND1
NACHT
DnaJ_CXXCXGXG
Viral_helicase1
NTPase_1
Plasmid_stab_B
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AEK44711
UniProt:
A0A9R0UBD5
LinkDB
All DBs
Position
complement(6735996..6738860)
Genome browser
AA seq
954 aa
AA seq
DB search
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH
CPTCGEPISKQTPQQIVDQVLEMDEGVRFQVLAPVVRGRKGEYVDLFENLQQQGYARVVV
DGTMHPLTDPPKLKKQEKHQIGVVIDRLSVKSSSRQRLTDSVETALRLADGLIELEFVDL
PENDPHRIRGFSENLACPNGHPLAIEDLEPRSFSFNSPYGACPECTGIGIRKEVDPELVV
PDDELSLAEGAIAPWSGGQSADYFIRLLESLSETIGFRMDTPWRRLPARAQKAVLHGVDE
QVHVRYKNRYGRQRSYYAAFEGVIPFLERRQEQTESEYMRERYEGYMREVPCPACQGTRL
KPEILAVTLAHKTRGDMSIAEVCALSIAEASQFLDELELGQREAMIAGAVLKEIQARLRF
LLDVGLTYLSLDRASATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIE
TLTRLRNLGNTLIVVEHDEDTIRSSDWVVDIGPGAGEHGGHIVHSGPYKKLLKSKDSLTG
QYLSGRRKIEVPAIRRPIDKKRQLTVVGAREHNLRGLDVSFPLGCLVSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVNGLNNVDKLVRVDQSPIGRTPRSNPATYTGVWDH
VRKLFAATTEAKVRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGAR
YNRETLEVHYKGKTVSDVLDMPIEEAAEFFEPIKAIHRHLQTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDINKLIGVINGLVDKGNSVIVIEH
NLDVIKTSDWIIDMGPEGGSGGGQIVAEGTPEHVAEVEGSYTGEFLRTVLTPAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatcgcctcgttgttcgcggtgcccgcgagcacaaccttcgcggcgtggatctc
gacctgccccgcgacagcctgatcgtgttcaccggcctgtccgggtcggggaagtcgagc
ctcgccttcgacaccatcttcgccgaagggcagcggcgctacgtcgagtcgctctcggcc
tacgcccgccagttcctcgggcagatggacaagccggacgtcgacttcatcgagggcctc
tcgcccgcggtgtcgatcgaccagaagtcgacctcgcgcaacccgcgttcgaccgtgggc
acgatcaccgaggtctacgactacctgcgcctgctctacgcccgcgccggcaaggcgcac
tgccccacgtgcggcgagccgatcagcaagcagaccccgcagcagatcgtcgaccaggtg
ctggagatggacgaaggcgtccgcttccaggtgctcgcgccggtggtgcgcgggcgcaag
ggcgagtacgtcgacctgttcgagaacctgcagcagcagggctacgcgcgcgtggtcgtc
gacggcacgatgcacccgctcaccgatccgccgaagctgaagaagcaggaaaagcaccag
atcggcgtggtcatcgaccggctgagcgtgaagtcgtcttcgcgccagcggctcaccgac
tcggtcgagacggcgctgcggctggccgacgggctgatcgagctcgagttcgtcgacctg
ccggagaacgacccgcaccggatccgcggcttctccgagaacctggcctgtcccaacggc
cacccgctggccatcgaggacctcgagccccgctcgttctccttcaactcgccctacggc
gcctgccccgagtgcaccggcatcggcatccgcaaggaggtcgacccggagctggtggtc
ccggacgacgagctgtcgctggccgagggcgcgatcgcgccgtggtcgggcggccagagc
gccgactacttcatccgcctgctcgagtcgctgtcggagaccatcggcttccgcatggat
acgccgtggcggcggctgccggcgcgcgcccagaaggcggtgctgcacggcgtcgacgag
caggtccacgtccgctacaagaaccgctacggccgccagcgctcgtactacgcggccttc
gagggcgtcatcccgttcctcgagcggcgccaggagcagaccgagtccgagtacatgcgc
gagcggtacgagggctacatgcgcgaggtgccgtgcccggcctgccagggcacccggctc
aagccggagatcctcgcggtgacgctggcgcacaagacccgcggtgacatgtccatcgcc
gaggtctgcgcgctgtccatcgcggaggcgtcgcagttcctcgacgagctggagctgggg
cagcgcgaggcgatgatcgccggtgcggtgctcaaggagatccaggcccgcctgcgcttc
ctcctggacgtcggcttgacgtacctctcgctcgaccgcgcgtcggccactctctcgggt
ggtgaagcccagcgcatccggctggcgacgcagatcggttcgggcctggtgggcgtgctg
tacgtgctggacgagccgtcgatcggcctgcaccagcgcgacaaccaccgcctgatcgag
acgctgacccggctgcggaacctcggcaacacgctgatcgtcgtcgagcacgacgaggac
accatccgctccagcgactgggtggtcgacatcggcccgggcgccggcgagcacggcggc
cacatcgtccacagtggaccgtacaagaagctgctcaagagcaaggactcgctgaccggg
cagtacctgtccggccggcggaagatcgaggtgccggcgatccggcggccgatcgacaag
aagcggcagctgaccgtcgtcggcgcgcgcgagcacaacctgcgcggcctcgacgtgtcg
ttcccgctcggctgcctggtctcggtcaccggcgtctccggctcgggcaagtcgacgctg
gtcaacgacatcctcgcgacggtgctggcgaacaagctcaacggcgcccgtcaggtgccg
ggccgccacacccgcgtgaacggcctgaacaacgtcgacaagctggtgcgcgtcgaccag
tcgccgatcgggcggaccccgcgctccaacccggccacctacaccggtgtctgggaccac
gtccgcaagctgttcgcggccacgaccgaggccaaggtccgcggctaccagcagggccgg
ttctcgttcaacgtcaagggcggccgctgcgaggcgtgcgccggcgacggcacgatcaag
atcgagatgaacttcctgccggacgtctacgtcccgtgcgaggtctgcaagggcgcccgg
tacaaccgggagaccctcgaggtgcactacaagggcaagaccgtctcggacgtgctcgac
atgcccatcgaagaggccgcggagttcttcgagccgatcaaggccatccaccgccacctg
cagacgctggtggacgtcggcctcggctacgtccggctcggccagccggcgccgacgctg
tccggtggtgaggcgcagcgcgtcaagctggccagcgagctgcagaagcgctcgaccggc
aagacggtgtacatcctcgacgagccgacgaccggcctgcacttcgaggacatcaacaag
ctgatcggcgtgatcaacgggctggtcgacaagggcaactcggtgatcgtgatcgagcac
aacctcgacgtgatcaagacctccgactggatcatcgacatgggccccgagggcggctcc
ggcggcggccagatcgtcgccgagggcacgccggagcacgtcgccgaggtcgagggcagc
tacacgggcgagttcctgcggacggtgctcacccccgccgagtag
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