KEGG   Amycolatopsis mediterranei S699: RAM_31180
Entry
RAM_31180         CDS       T01822                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
amn  Amycolatopsis mediterranei S699
Pathway
amn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RAM_31180 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amn03400]
    RAM_31180 (uvrA)
DNA repair and recombination proteins [BR:amn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RAM_31180 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RAM_31180 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran AAA_29 AAA_16 AAA_21 RsgA_GTPase APS_kinase AAA_25 nSTAND1 NACHT DnaJ_CXXCXGXG Viral_helicase1 NTPase_1 Plasmid_stab_B ScfRs
Other DBs
NCBI-ProteinID: AEK44711
UniProt: A0A9R0UBD5
LinkDB
Position
complement(6735996..6738860)
AA seq 954 aa
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH
CPTCGEPISKQTPQQIVDQVLEMDEGVRFQVLAPVVRGRKGEYVDLFENLQQQGYARVVV
DGTMHPLTDPPKLKKQEKHQIGVVIDRLSVKSSSRQRLTDSVETALRLADGLIELEFVDL
PENDPHRIRGFSENLACPNGHPLAIEDLEPRSFSFNSPYGACPECTGIGIRKEVDPELVV
PDDELSLAEGAIAPWSGGQSADYFIRLLESLSETIGFRMDTPWRRLPARAQKAVLHGVDE
QVHVRYKNRYGRQRSYYAAFEGVIPFLERRQEQTESEYMRERYEGYMREVPCPACQGTRL
KPEILAVTLAHKTRGDMSIAEVCALSIAEASQFLDELELGQREAMIAGAVLKEIQARLRF
LLDVGLTYLSLDRASATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIE
TLTRLRNLGNTLIVVEHDEDTIRSSDWVVDIGPGAGEHGGHIVHSGPYKKLLKSKDSLTG
QYLSGRRKIEVPAIRRPIDKKRQLTVVGAREHNLRGLDVSFPLGCLVSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVNGLNNVDKLVRVDQSPIGRTPRSNPATYTGVWDH
VRKLFAATTEAKVRGYQQGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGAR
YNRETLEVHYKGKTVSDVLDMPIEEAAEFFEPIKAIHRHLQTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDINKLIGVINGLVDKGNSVIVIEH
NLDVIKTSDWIIDMGPEGGSGGGQIVAEGTPEHVAEVEGSYTGEFLRTVLTPAE
NT seq 2865 nt   +upstreamnt  +downstreamnt
gtggctgatcgcctcgttgttcgcggtgcccgcgagcacaaccttcgcggcgtggatctc
gacctgccccgcgacagcctgatcgtgttcaccggcctgtccgggtcggggaagtcgagc
ctcgccttcgacaccatcttcgccgaagggcagcggcgctacgtcgagtcgctctcggcc
tacgcccgccagttcctcgggcagatggacaagccggacgtcgacttcatcgagggcctc
tcgcccgcggtgtcgatcgaccagaagtcgacctcgcgcaacccgcgttcgaccgtgggc
acgatcaccgaggtctacgactacctgcgcctgctctacgcccgcgccggcaaggcgcac
tgccccacgtgcggcgagccgatcagcaagcagaccccgcagcagatcgtcgaccaggtg
ctggagatggacgaaggcgtccgcttccaggtgctcgcgccggtggtgcgcgggcgcaag
ggcgagtacgtcgacctgttcgagaacctgcagcagcagggctacgcgcgcgtggtcgtc
gacggcacgatgcacccgctcaccgatccgccgaagctgaagaagcaggaaaagcaccag
atcggcgtggtcatcgaccggctgagcgtgaagtcgtcttcgcgccagcggctcaccgac
tcggtcgagacggcgctgcggctggccgacgggctgatcgagctcgagttcgtcgacctg
ccggagaacgacccgcaccggatccgcggcttctccgagaacctggcctgtcccaacggc
cacccgctggccatcgaggacctcgagccccgctcgttctccttcaactcgccctacggc
gcctgccccgagtgcaccggcatcggcatccgcaaggaggtcgacccggagctggtggtc
ccggacgacgagctgtcgctggccgagggcgcgatcgcgccgtggtcgggcggccagagc
gccgactacttcatccgcctgctcgagtcgctgtcggagaccatcggcttccgcatggat
acgccgtggcggcggctgccggcgcgcgcccagaaggcggtgctgcacggcgtcgacgag
caggtccacgtccgctacaagaaccgctacggccgccagcgctcgtactacgcggccttc
gagggcgtcatcccgttcctcgagcggcgccaggagcagaccgagtccgagtacatgcgc
gagcggtacgagggctacatgcgcgaggtgccgtgcccggcctgccagggcacccggctc
aagccggagatcctcgcggtgacgctggcgcacaagacccgcggtgacatgtccatcgcc
gaggtctgcgcgctgtccatcgcggaggcgtcgcagttcctcgacgagctggagctgggg
cagcgcgaggcgatgatcgccggtgcggtgctcaaggagatccaggcccgcctgcgcttc
ctcctggacgtcggcttgacgtacctctcgctcgaccgcgcgtcggccactctctcgggt
ggtgaagcccagcgcatccggctggcgacgcagatcggttcgggcctggtgggcgtgctg
tacgtgctggacgagccgtcgatcggcctgcaccagcgcgacaaccaccgcctgatcgag
acgctgacccggctgcggaacctcggcaacacgctgatcgtcgtcgagcacgacgaggac
accatccgctccagcgactgggtggtcgacatcggcccgggcgccggcgagcacggcggc
cacatcgtccacagtggaccgtacaagaagctgctcaagagcaaggactcgctgaccggg
cagtacctgtccggccggcggaagatcgaggtgccggcgatccggcggccgatcgacaag
aagcggcagctgaccgtcgtcggcgcgcgcgagcacaacctgcgcggcctcgacgtgtcg
ttcccgctcggctgcctggtctcggtcaccggcgtctccggctcgggcaagtcgacgctg
gtcaacgacatcctcgcgacggtgctggcgaacaagctcaacggcgcccgtcaggtgccg
ggccgccacacccgcgtgaacggcctgaacaacgtcgacaagctggtgcgcgtcgaccag
tcgccgatcgggcggaccccgcgctccaacccggccacctacaccggtgtctgggaccac
gtccgcaagctgttcgcggccacgaccgaggccaaggtccgcggctaccagcagggccgg
ttctcgttcaacgtcaagggcggccgctgcgaggcgtgcgccggcgacggcacgatcaag
atcgagatgaacttcctgccggacgtctacgtcccgtgcgaggtctgcaagggcgcccgg
tacaaccgggagaccctcgaggtgcactacaagggcaagaccgtctcggacgtgctcgac
atgcccatcgaagaggccgcggagttcttcgagccgatcaaggccatccaccgccacctg
cagacgctggtggacgtcggcctcggctacgtccggctcggccagccggcgccgacgctg
tccggtggtgaggcgcagcgcgtcaagctggccagcgagctgcagaagcgctcgaccggc
aagacggtgtacatcctcgacgagccgacgaccggcctgcacttcgaggacatcaacaag
ctgatcggcgtgatcaacgggctggtcgacaagggcaactcggtgatcgtgatcgagcac
aacctcgacgtgatcaagacctccgactggatcatcgacatgggccccgagggcggctcc
ggcggcggccagatcgtcgccgagggcacgccggagcacgtcgccgaggtcgagggcagc
tacacgggcgagttcctgcggacggtgctcacccccgccgagtag

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