Amycolatopsis mediterranei S699: RAM_32425
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Entry
RAM_32425 CDS
T01822
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amn
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amn03016
]
RAM_32425
Enzymes [BR:
amn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RAM_32425
Transfer RNA biogenesis [BR:
amn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RAM_32425
Prokaryotic type
RAM_32425
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
LPP
Motif
Other DBs
NCBI-ProteinID:
AEK44958
UniProt:
A0A9R0P296
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Position
complement(6999410..7000243)
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AA seq
277 aa
AA seq
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MTSHDVVARARRIMGTRKVGHAGTLDPMATGVLVLGVERATKLLGHLALDRKTYLATLSL
GSSTTTDDAEGEVLTTADTKQTQDDDIANGIEKLTGDIQQVPSAVSAVKIDGKRAYARVR
AGEDVVIPARPVTVYRFDVLAVRHEEDHVEVDAVVECSSGTYVRALARDLGAGLGVGGHL
KALRRTTVGPFTLAKARTLDQLEEQPELSLDLDAAVAAAFPRRDLDAATAKAVRHGQRIP
AAGLEGTYGLFGPDGRVLALAADEQGVSRAVVVLLPA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcacgacgtcgtcgcgcgcgctcgccggatcatgggcacccgcaaggtcggg
cacgccggcacgctcgacccgatggcgaccggcgtgctggtgctcggcgtcgagcgcgcc
accaagctgctcggccacctggccctggaccgcaagacctacctggccaccctgagcctc
ggcagcagcaccacgaccgacgacgccgagggcgaagtcctcaccacggcggacacgaag
cagacgcaagacgacgacatcgccaacggcatcgaaaagctgaccggcgacatccagcag
gtgcccagcgcggtcagcgcggtcaagatcgacggcaagcgcgcctacgcccgcgtccgc
gccggcgaggacgtcgtcatcccggcccgcccggtcaccgtctaccgcttcgacgtcctc
gccgtccgccacgaagaggaccacgtcgaggtggacgccgtcgtcgagtgctcttccggc
acctacgtccgcgcgctggcccgcgacctgggcgcgggcctcggcgtcggcggccacctg
aaggcgctccggcgcaccacggtcggccccttcaccctcgccaaggcgaggaccctcgac
cagctcgaagaacagcccgaactgagcctcgacctcgacgccgccgtcgccgccgccttc
ccgcggcgcgacctcgacgcggccacggcgaaagcggtccgccacggccagcgcatcccg
gcggccggcctcgaaggcacttacgggctcttcggtcccgacggccgggtgctcgccctg
gccgccgacgaacagggtgtatcccgcgcggtggtcgtgttgctgcccgcctag
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