Amycolatopsis mediterranei S699: RAM_32940
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Entry
RAM_32940 CDS
T01822
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAM_32940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amn03019
]
RAM_32940
03110 Chaperones and folding catalysts [BR:
amn03110
]
RAM_32940
03029 Mitochondrial biogenesis [BR:
amn03029
]
RAM_32940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amn04147
]
RAM_32940
Messenger RNA biogenesis [BR:
amn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RAM_32940
Chaperones and folding catalysts [BR:
amn03110
]
Heat shock proteins
HSP70 / DNAK
RAM_32940
Mitochondrial biogenesis [BR:
amn03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
RAM_32940
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
RAM_32940
Exosome [BR:
amn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RAM_32940
Exosomal proteins of breast cancer cells
RAM_32940
Exosomal proteins of colorectal cancer cells
RAM_32940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
Peptidase_C14
Pept_C14_Metacaspase
MreB_Mbl
DDR
ParM_N
ECM13_helical
DUF8340
Motif
Other DBs
NCBI-ProteinID:
AEK45061
UniProt:
A0A9R0P2D0
LinkDB
All DBs
Position
complement(7101416..7103725)
Genome browser
AA seq
769 aa
AA seq
DB search
MNRALVVGCAGYEDPDIAPLRHAQTDAARVADTLRTVCGVEDSELVVLHDNMPRTHQPTR
TNVLRHLTRMAADPRDDGILYFFFSGHGFQAGDNSQYLLPIDCVRAAVEDTALRFDTVVR
YLGAAAAPHVVLFLDACRNVLDGGRSVSSSLPRIDVDALCPPGVVSFCSCRPGRVSYEID
AIRSGVFTEALCSAFGSVGRCRTIHELDAYLSVQVPALAKAHGKPEQRPHSRVEPLGVQH
LEVVSEQTLNQWRATTPIGAERRTRRVAPVVPAGTVEDPLLAIDFGTSYSVVSWYRPEGD
VALIPGPDGRPLVPSVLHFLPDMDYLVGTAAVEATPYRPTSTIRHAKRDLGRSVDYLIEG
RSIEPVLAVGLILRSLRRNAEEALGSPVRRCIASHPANFTLRQIDTLEKAFELAGLTVTR
MIGEPNAASLLTLMATPEAEQDYLVVDLGGGTFDVALVEAGEGVAEVRAVAGSNEVGGLD
FDDVMVAYAEEQLRTVHGWGGELTSTVRDKLRREAERAKRDLGYRDATTMLLTDLDDVSR
GLVDISIEIDRTQFRRLTAELNKSVRATLDTVFTRLAFGESVSAWVERGGKVMLAGQGTK
IFTVSEQITAVVPGAEVVSNFQETAVAHGLGTQAGVLTGFQKTFLLLNALSFGVGVLVSG
TDGRICSLSPHAEDNKEVLTMIDPSRTIPTKRTEFLRLTGKRGVAHEITIIEIPRSSGLV
FGSVSLVAAKGDISITVDVDANSIVRLTFLDQKNEVIGSHQLNELRQRS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgggcgctggtggtcggctgcgcgggttacgaggaccccgacatcgctccgctg
cgccacgcgcagaccgacgcggcaagggtcgccgacacgttgcggacggtttgcggtgtc
gaagattccgaactcgtcgtcctgcacgacaacatgccgaggacgcaccaaccgacgaga
accaacgtgctgcggcacctcacgcggatggcggccgacccgagagacgacggaatactc
tacttcttcttctccggacacgggttccaagccggcgacaactcgcaatacctgctgccg
atcgactgcgtccgggcggcggtggaggacacggccctgcgattcgacaccgtcgtgcgc
tacttgggtgcggccgcggccccgcacgtcgtgttgttcctcgacgcctgccggaacgtt
ctggacggcggcaggtccgtctcgtcgtcgttgccccgcatcgacgtggatgccctgtgc
ccgccgggcgtcgtgtccttttgctcctgccgccccgggcgggtctcctacgagatcgac
gccatcaggtcgggcgttttcaccgaagcgttgtgttcggcgttcggctctgtaggccgg
tgtcggacgattcacgagctcgacgcctacctttcggtgcaggtaccggccttggccaag
gcgcacggcaagcccgagcaacgaccgcattccagggtcgagccgctcggtgtgcagcac
ctggaggtcgtctccgagcagacgctcaaccagtggcgcgcgacgacgcccatcggcgcg
gagcggcgaaccaggcgcgtcgcccccgtggttccggccggcaccgtggaagatccgctg
ctggcgatcgacttcgggacgagttactccgtcgtgtcctggtaccggcccgagggcgac
gtcgcgctgatccccggcccggacggacggccgctggtgccgtccgtgctgcacttcctg
ccggacatggactacctggtcggcaccgcggcggtggaggcgacaccgtaccggccgact
tcgacgatccggcacgcgaaacgcgacctgggccgtagcgtcgattacctcatcgagggg
cgcagcatcgagccggtgctcgccgtcggcctgattctgcggtcgttgcggcgcaacgcc
gaagaggcgctcggctccccggttcggcgatgtatcgcgtctcatccggcgaacttcacg
ttgcggcagatcgacactctggaaaaggccttcgaactggccggcctgaccgtcacccgg
atgatcggagaaccgaacgccgcgtccctgctgacgctgatggcgacgccggaggcggag
caggactacctggtcgtcgacctcggcggaggcacgttcgacgtcgctctggtcgaggcc
ggcgagggggtcgcggaggtccgggccgtcgccggcagcaacgaggtcggcggactcgac
ttcgacgacgtcatggtcgcctacgccgaggaacagttgcgtaccgtgcacggctggggt
ggggaactgacgtcgaccgtccgggacaagctgcggcgggaggcagaacgcgcgaaacgg
gacctcggctaccgggacgccacgaccatgctgctgaccgacctcgacgacgtttcgcgc
ggcctggtcgatatcagcatcgagatcgaccggacgcagttccggcgtctgacagccgag
ctcaacaagtcggtccgggcgactctggacaccgtcttcacccgcctcgcgttcggtgag
agcgtgagcgcgtgggtcgagcgcggcggaaaggtcatgctggccggccaagggaccaag
atcttcaccgtttcggagcagatcaccgcggtcgtccccggggccgaggtcgtctcgaac
ttccaggagaccgccgtagcgcacggtctcggaacacaagccggtgtgttgaccggtttt
cagaagaccttcctgctgttgaacgccttgagcttcggtgtgggagttctcgtatcgggc
acggatggacgtatttgctcgctgtctccccatgccgaggacaacaaagaagtcctgacc
atgatcgacccatcgaggacaattcccaccaagcgcactgagttccttcgcctcaccgga
aagcgtggcgtggcccacgagatcacgatcatcgagattccccgttcgtcgggtctcgtg
ttcgggtccgtctcgttggtggcggcgaaaggggacatctcgattacggtggacgtcgac
gcgaacagcatcgttcggctgactttcctcgatcaaaagaacgaggtgatcggttcgcat
cagctgaacgagctgcgtcagcggtcgtga
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