Amycolatopsis mediterranei S699: RAM_41355
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Entry
RAM_41355 CDS
T01822
Name
(GenBank) adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAM_41355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amn03000
]
RAM_41355
03400 DNA repair and recombination proteins [BR:
amn03400
]
RAM_41355
Enzymes [BR:
amn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RAM_41355
Transcription factors [BR:
amn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RAM_41355
DNA repair and recombination proteins [BR:
amn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAM_41355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
PKS_DE
UBA_6
Motif
Other DBs
NCBI-ProteinID:
AEK46738
UniProt:
A0A9R0UDF0
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All DBs
Position
8852512..8853951
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AA seq
479 aa
AA seq
DB search
MVTETLSLWRDAERCYRVVTARDPRFDGQFIMAVRTTGIYCRPSCPASTPKVQNVRFFPT
SAAAQANGFRACRRCLPDAVPGSPHWNVRADLAARAMRLISDGTVEREGVPGLARRLGYS
ERQLGRVLAAELGAGPLALARAHRAHSARLLIEMSELPLTDVAFAAGFSSVRQFNETIRE
VFATTPSQLRAFAASRRGRQSDVTGTRLSLRLPFRPPFDAAGLLRFFADHAVPGVEEVTA
EAYARTLRLAHGTGVVRLTPSPDHVRCELMLTDLRDLGSAVSRVRRLLDLDADPAAVTRV
LGADPALAPVVAAVPGIRVPGAVDGEELLLRALLREVPPGEEVPGEWGVRRLFPTAARIA
TAGLGETVTGVAAALAEGRLEVHVGREAAELRAELLACPGIDPSAADYVLMRVLGAPDIL
LTGDTEVRRGAEALGIAPDSLGERARSWTPWCSYAGRYLRHAAASPSLGRPATARLGRR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccgaaacgctctcactctggcgagacgccgagcgctgctaccgcgtggtcacc
gcccgcgacccgcgcttcgacggccagttcatcatggcggtccgcaccaccgggatctac
tgccgcccgtcgtgcccggcttcgacgccgaaggtgcaaaacgtccgcttcttcccgacg
tcggcggccgcgcaggccaacggcttccgcgcctgccgccgctgcctgccggacgccgtg
cccggctcgccgcactggaacgtgcgcgccgacctggccgcgcgggcgatgcgcctgatc
tccgacgggaccgtcgagcgcgaaggcgtccccggcctcgcgcggcggctcggctactcg
gaacgccagctgggccgggtgctcgccgccgagctgggcgcaggcccgctggccctggcc
cgggcgcaccgcgcgcactcggcgcggctgctcatcgagatgtccgagctgccgctgacc
gacgtcgccttcgcggcgggcttctccagcgtgcggcagttcaacgagacgatccgcgag
gtgttcgccacgacgccttcgcagcttcgtgccttcgcggcttcacgacgtggccggcag
agcgacgtgaccgggacccggctcagcctgcggctgccgttccggccgcccttcgacgct
gcggggttgcttcgcttcttcgcggaccacgcggtgccaggcgtcgaggaagtcactgcg
gaggcctacgcgcggaccctgcggctcgcccacggcaccggcgtcgtgcgattgacgcct
tcgccggaccacgtgcgctgcgagctgatgctcaccgacctgcgcgatctcggcagcgcg
gtcagccgggtgcgccggctgctcgacctcgacgccgatcccgcggcggtcacccgcgtc
ctcggcgccgatccggcgttggcgccggtggtcgcggccgtgccggggatccgggtgccg
ggcgccgtcgacggcgaggaactgctgctccgcgccctgctgcgcgaggtgcctccgggc
gaggaggtgcctggcgagtggggtgtgcgcaggctcttccccacggcagcccggatcgcg
acggccgggctcggcgaaaccgtcaccggcgtggccgccgccctggccgaaggacggctg
gaggtccacgtcggccgggaggcggccgaactgcgtgcggagctgctggcgtgcccgggg
atcgacccgtcggcagcggactacgtgttgatgcgcgttctcggcgccccggacatcctg
ctcaccggcgacaccgaggtccggcgcggtgccgaggcgctgggcatcgcacccgactca
ctcggcgagcgggcccgctcgtggacgccgtggtgttcctacgccgggaggtatctccgg
cacgcggccgcctcgcctagccttggtcgccccgccacagcacggcttgggcgacgatga
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