Amycolatopsis mediterranei S699: RAM_46055
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Entry
RAM_46055 CDS
T01822
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00300
Lysine biosynthesis
amn00470
D-Amino acid metabolism
amn01100
Metabolic pathways
amn01110
Biosynthesis of secondary metabolites
amn01120
Microbial metabolism in diverse environments
amn01230
Biosynthesis of amino acids
Module
amn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RAM_46055
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RAM_46055
Enzymes [BR:
amn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RAM_46055
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
RHA1_ro05818_N
Motif
Other DBs
NCBI-ProteinID:
AEK47676
UniProt:
A0A9R0P7Q5
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All DBs
Position
9830749..9832092
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AA seq
447 aa
AA seq
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MTLSELLPSLGCEAADHLEPGVWPRSTRIGEDGELLFAGAPVSHLAARFGTPSYLIDEQQ
VRDTAREYREALPDVEVAYASKALCTRAVLRWVAEEGLSLDTCSAGEIAVARSVGFPAER
MLLHGNAKTPEDLKAALGYGVRRIVVDSLDEIEQLGALAHGAQQVMIRVTPGVAAGAHAA
ISTGTEGQKFGFSLLDGVPDNVDAAVEAVKRQPGLRLRGLHCHIGSQVSRVDRYEAAARR
MAEVLVRIRDTHGVTLRELDLGGGHAVPYVGGEPAFDLGGYSRRLRVALAYECAAHRFPL
PRLTIEPGRAIVGPAGITVYRVCAVKRGSRTFVAVDGGMSDNARPSLYGARYTTRLVGRR
STAKRLPMTVVGRHCEAGDVLADGISLPADLHAGDLLAVPCTGAYHHSLASNYNQVGRPP
LIGVRGGVATLLVRRETEEDLGRRDLG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctcagcgagcttcttcccagcctcggctgcgaagccgccgatcacctcgagcca
ggagtctggccgcgaagcacccgaatcggcgaagacggcgaactgctcttcgccggcgcg
cccgtcagccacctcgccgcccgcttcgggacgccctcctacctcatcgacgaacagcag
gtccgcgacaccgcacgcgagtaccgcgaagcgctgccggacgtcgaagtcgcgtacgcg
agcaaggcgctctgtacgcgggccgtactgcgttgggtcgccgaagaggggttgtcgctc
gacacctgctccgccggcgagatcgccgtcgcgcgctcggtcggcttccccgcggagcgc
atgctgctgcacggcaacgcgaagacgcctgaggacctgaaggccgcgctcggctacggc
gtccggcggatcgtcgtcgactcgctcgacgagatcgaacagctcggcgcgctcgcccac
ggcgctcagcaggtgatgatccgggtgacgccgggcgtcgcggccggggcgcacgccgcc
atcagcaccggcaccgaaggccagaagttcggcttctcgctcctcgacggcgttcccgac
aacgtcgacgccgccgtcgaagcggtgaagaggcaacccgggttgcgccttcggggcctg
cactgccacatcggctcacaggtgtcccgcgtcgaccggtacgaggccgccgcgcggcgg
atggccgaggtgctcgtccggatccgcgacacccacggcgtcacgttgcgggaactcgat
ctcggcggcggacacgcggtgccctacgtcggcggcgagcccgcgttcgacctcggcggc
tactcgcggcgcctgcgcgtggcgctcgcctacgagtgcgcggcacaccgctttcccctg
ccgcgcctgacgatcgagcccggccgcgcgatcgtcgggcccgccgggatcacggtctac
cgcgtgtgcgcggtcaagcgcggcagccgcacgttcgtcgcggtcgacggcggcatgagc
gacaacgcccggccatcgctctacggcgctcggtacacgacacgcctggtgggacggcgt
tcgacggcgaagcgcctcccgatgaccgtggtcggcaggcactgcgaagccggtgacgtc
ctcgccgacggcatcagcctgcccgccgacctgcacgccggcgacctcctggccgtgccg
tgcaccggcgcgtaccaccactcgctggcgtcgaactacaaccaggtcggccggccaccg
ctgatcggcgtgcggggcggcgtcgcgacgctgctggtgcgccgcgaaaccgaggaagat
ctcggccgacgcgacttgggctga
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