Amycolatopsis mediterranei S699: RAM_47650
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Entry
RAM_47650 CDS
T01822
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAM_47650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amn03400
]
RAM_47650
Enzymes [BR:
amn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RAM_47650
DNA repair and recombination proteins [BR:
amn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RAM_47650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Staphylcoagulse
Motif
Other DBs
NCBI-ProteinID:
AEK47995
UniProt:
A0A9R0PHR4
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All DBs
Position
complement(10150985..10151758)
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AA seq
257 aa
AA seq
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MLIGAHVRDDDPLPAVVERKAEVVQFFLSDPQGWKAPKPHPHGEAIKADPVEVFIHSPYL
INVASLNNRIRIPSRKNVTQHADGAAAIGAKGLIVHGGHVGANDDAEAGLDNWRKLFERE
QEKGGFKVPILIENTAGGENAMTRDLDVIARLWDKVGEFGAGFCLDTCHAFAAGWDLATA
VGRVKAITGRIDLVHLNNSRDEFGSTRDRHANVVQGDGTIDPEVLVAVAREAGAPVVVET
PADGQAADIAYLREQLG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgctgattggcgcccatgtccgtgacgacgacccgttgcccgcggtcgtcgagcgcaaa
gccgaagtcgtccagttcttcctctccgacccgcagggctggaaggccccgaagccgcat
ccgcacggcgaagccatcaaggccgacccggtcgaggtgttcatccactcgccgtacctc
atcaacgtggcttcgctgaacaaccggatccggatcccgtcccgcaagaacgtcacccag
cacgcggacggtgcggccgcgatcggcgcgaagggcctgatcgtgcacggcgggcacgtc
ggggcgaacgacgacgccgaggccggcctggacaactggcgcaagctgttcgagcgggag
caggagaagggcggcttcaaggtcccgatcctgatcgagaacaccgccggcggcgagaac
gcgatgacccgcgacctcgacgtcatcgcccggctgtgggacaaggtcggcgagttcggc
gccgggttctgcctcgacacctgccacgcgttcgccgcgggctgggacctggcgaccgcc
gtcggacgagtcaaggccatcaccggccggatcgacctggtgcacctcaacaactcccgc
gacgagttcggctcgacccgcgaccggcacgccaacgtcgtgcagggcgacgggacgatc
gaccccgaggtgctggtcgccgtcgcccgcgaggcgggcgccccggtcgtcgtcgagacg
ccggccgatgggcaggccgccgacatcgcctacctgcgggaacagctcggttag
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