Acetomicrobium mobile: Anamo_0406
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Entry
Anamo_0406 CDS
T02151
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
amo
Acetomicrobium mobile
Pathway
amo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anamo_0406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amo03019
]
Anamo_0406
03009 Ribosome biogenesis [BR:
amo03009
]
Anamo_0406
Enzymes [BR:
amo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Anamo_0406
Messenger RNA biogenesis [BR:
amo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Anamo_0406
Ribosome biogenesis [BR:
amo03009
]
Prokaryotic type
rRNA helicases
Anamo_0406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AFM21063
UniProt:
I4BUV6
LinkDB
All DBs
Position
complement(391346..392836)
Genome browser
AA seq
496 aa
AA seq
DB search
MSINVNGFKKYGLSERLLDAIEAKGFASPTPVQREMLNLDSFKRDVIVRAKTGSGKTLAF
LLPIYNEGNLDSGSPKVLILSPTRELALQTNAEACWLGQNQDISTASLVGGMDMAKQIRE
LRKGASIVIGTPGRTLDHLRQGTLKPEGIHSIILDEGDRMLDMGFKEELEAILQALPKKK
RTWLFSATMPEEVMTISKKYLNEPLCIDLVEDENQHSDIEHEIYTVPQRFAFEGLVNVLL
WESPTKGLIFCRTKAETMEIAKKLSAKGFKALCLNGDMTQRERSASLGAFKSGQTSLLVA
TNVAARGLDVPGVDYVVQYGLPDDLETFIHRSGRTGRAGAHGKDVLVLTPQETRHIKQMI
GKTKIKAKWLTVPNRNDINKKRKIEYEKDLLGTDEVDEDVLTWAGELLEKSDPATLVAKL
LKRTNADSAGGYDLEEELKRELKREPLKRKDSSWAKGKKDMHSISRDKKIKPRRKIRSSD
LFLAEPQNLGKKRRYN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaatgttaacggatttaaaaagtacggattgagcgagagattgcttgatgcc
atcgaggctaagggatttgcttcaccgactcccgttcaaagggagatgctgaacctcgac
agcttcaagagagacgtgatagtaagggcaaagacgggttccggaaagacgcttgccttt
ctgcttcccatctacaacgaaggaaacctcgatagcggtagccctaaagtactgatactt
tctcctaccagagaattagccctacaaactaatgcggaagcatgttggttggggcaaaat
caggacatctccacggccagcctggtgggcggaatggacatggccaagcaaattcgagag
ctaagaaagggcgcatcgatagtcatcggcactcccggcaggacgttggatcacttgcgc
caaggcacgcttaaaccagaaggcatacacagcatcatacttgacgaaggggatcgcatg
ctggacatgggctttaaagaggaactcgaagccattcttcaagcgcttcccaagaaaaag
aggacgtggcttttttccgccaccatgcccgaagaggtaatgacaatttccaagaaatac
ctcaatgagccactttgcattgacctcgtcgaagacgaaaaccagcattccgatatagag
catgaaatctacacggtcccccaaagatttgcctttgaggggctggtcaatgtgcttttg
tgggaaagtccgaccaagggcctcatcttttgtcgcacgaaggcagagacaatggaaatt
gcaaaaaagctttctgcaaagggctttaaggcattatgcctaaatggggacatgacacag
agagaaagaagcgcttccctgggggcatttaaatccggacaaacatccctcttggtagcg
acgaacgtggcagcaaggggccttgacgtgccaggggttgattacgtcgttcagtacggc
ctgccagacgatctcgagaccttcatacaccgcagcgggcgcaccggaagggcaggtgct
catggcaaggatgtcttggtccttactccccaagaaacccggcacattaaacaaatgatt
ggcaaaactaaaataaaggccaaatggcttaccgtgccaaaccgcaatgacattaacaaa
aaaaggaagatcgaatacgaaaaggacctccttggcaccgatgaggttgacgaagatgtg
ctgacatgggcaggggaactgctcgaaaaaagcgacccagcaacattggtcgcaaagttg
cttaaaagaacgaacgcagatagcgcgggcggctacgacctggaggaagaattaaagcga
gagctaaaacgagagcccctgaagagaaaggactcctcgtgggccaaaggcaagaaagac
atgcattcaatttcaagagataaaaagataaaaccacgccgaaaaatacgcagttcggat
ttattcctggctgaacctcaaaatttaggaaaaaaacgaagatacaactag
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