Acetomicrobium mobile: Anamo_0466
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Entry
Anamo_0466 CDS
T02151
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
amo
Acetomicrobium mobile
Pathway
amo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Anamo_0466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amo03021
]
Anamo_0466
03400 DNA repair and recombination proteins [BR:
amo03400
]
Anamo_0466
Enzymes [BR:
amo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Anamo_0466
Transcription machinery [BR:
amo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Anamo_0466
DNA repair and recombination proteins [BR:
amo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Anamo_0466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFM21120
UniProt:
I4BV13
LinkDB
All DBs
Position
456447..459995
Genome browser
AA seq
1182 aa
AA seq
DB search
MPEFVKVGRKRERLNFGPSKELIALPYLVELQHESYKWFLQPEEHPDHRKSQGLQELLEE
IFPIESYDGSFVIEFVRYYIDPPTLTEEEARQKDLTWSMPLRATVRLVNRNTGEIKEEEI
FLGDFPVMTDRGSFIINGTERVVVNQLARSAGVYFSIESGAPGQEVYKAKIIPDRGAWLE
FDLTSGDVLSVNIDNRRKVPATVLLKAFGLKDNTELIKAFGGVEEEVDIVEGDVRGRLLA
EDIIDSAGHVIIPKNDRLTKEHVETLWDRGLTKVRLWNVDPIFPATLERDGSNSPEEAML
EIFKRMRPNEPLRVENAKDYVYSIFFDTRRYNLGRVGRYKLNRRLGLNISEEVRLLTLED
LIAIVKGILNLRDGTEREDDIDHLANRRVRSVGELLQNQIRIGLLRMERIAKDRMTTIPD
LSTATAHDLINIRPISAAIREFFGSSQLSQFMDQTNPLADVTHRRRLSAMGPGGLTRERA
GFEARDVHPSHYGRICPIETPEGPNIGLVTSLANYAKVNEYGFLMSPKRVVRDRYVTDEV
VYLSADEEDEAYVARANIPVDEEGRINQEEVHVRHRGSIVIVPPEQVNYADVTPKQIVSV
SAALIPFLEHDDANRALMGSNMQRQAVPLMQSEAPLVGTGIEEKVARDSGACILAKRAGT
VTYVDANRIEVTTDDGQVDKYSLIKFRRSNQGTVIHQRPIVKKGETVKAGDFLADGQAVD
QGELALGRNVLVAFMGWEGYNFEDAILLSERLVKEDVYTSIHIEEYEIDARDTKLGPEEI
TRDIPNVGEDQLKNLDERGIVRIGAEVRAGDILVGKVTPKGETDQTPEEKLLRAIFGEKA
REVRDTSLRVPHGEGGKVVAVKRLSRDEYGDELPPGVNEVVKVFLAQLRKITVGDKMAGR
HGNKGVVSRILPVEDMPYLPDGTPVDVVLNPLGVPSRMNLGQVLETVLGFVAYHNGWRVA
TPVFEGASVDEIFKYMEEIRHRKFPSLTRDGSIVLYDGRTGEPFESKVTVGHMYMLKLIH
LVDDKIHARSVGPYSLITQQPLGGKSQFGGQRFGEMEVWALEGYGAAHTLQEMLTIKSDD
VQGRLKTFESIVKGQNIGNPGVPESFRVLIKELQGLALDVQVLYDDQSIGDVEEEERHKK
RLDKQVPEAQERKEAVVGLEARIFGDPDDDEEDEIDPEGDDA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgccggaatttgtgaaagtggggagaaaacgcgaaaggttgaattttggtccctcgaag
gaattaattgccctaccatatttagtcgagcttcaacatgagtcatacaaatggttctta
caacccgaagagcatcctgaccacagaaagtcacaaggacttcaggagctgctcgaggag
atctttcccatagaaagctacgacggatccttcgtgatagagttcgtacgatattacatc
gatcctccgaccttgacggaagaggaggccaggcagaaggacttgacctggtcaatgcct
cttcgtgccaccgtgcgactcgtgaacagaaacacgggcgaaataaaagaggaggagata
ttccttggagacttccctgtcatgactgacaggggaagctttataatcaacggaacggaa
agggtagtcgtaaaccagttggcccgttccgctggagtgtatttcagcatcgagtcgggt
gctcccggacaggaggtctacaaggccaagatcatccccgacaggggtgcctggcttgag
ttcgacctaacctccggtgacgtcttatcggttaacatcgacaacagacgaaaagtgccg
gccaccgtgctgcttaaggccttcggactcaaggataacacggagcttatcaaggccttt
ggcggagtcgaagaggaggtagacatagttgaaggggacgtcagaggacgtctgctggcc
gaagatatcatagacagcgcaggccacgtgatcattcccaaaaacgatcgcctgaccaag
gagcacgtcgaaacgttatgggacaggggcttaacgaaggttaggctctggaacgtggat
cccatctttcccgccaccctcgaacgtgacgggagcaactcccccgaggaggcaatgctt
gagatcttcaagcgtatgcgtcccaatgaacccttgagggtggagaacgcaaaggactac
gtttattccatattctttgataccaggcgctacaaccttggccgcgttggcagatacaag
ctgaacagaaggctgggcctcaacatatccgaagaggttaggttgctgacccttgaggat
ctgatagccatagttaagggaatactcaacctccgcgacggaacggagcgcgaggatgac
atagaccacttggccaacaggcgcgttcgttccgtgggcgagttgctgcagaaccagatt
cgcataggtttgcttcgaatggagcgtatagccaaggacaggatgacgacgataccggat
ttgtcgaccgccactgcacatgacctgataaacattcgacccatatcggcagccattagg
gagttcttcggttccagccagttgtctcagttcatggaccagaccaaccccttggcggac
gtcacccacagaagaaggctgtcggcaatggggcccgggggtttgacgagagagagggca
ggctttgaggcgcgtgacgtgcatccctctcactatggaaggatttgtcctatagagacg
ccggaaggtccgaacatcggactggtgacgtctttggccaattatgccaaggtaaacgaa
tacggctttttgatgtcgcccaagagggtcgtcagggaccgctacgtgaccgacgaggtg
gtgtatttgtcagccgacgaggaggacgaggcatacgtggccagggccaacatacccgtt
gacgaagagggtcgcatcaaccaggaagaggtgcacgtaaggcaccgcggttccatagtc
atagtgccccccgaacaggtcaactacgccgatgttacgccaaagcagattgtatcggtt
tcggcagcccttataccttttttggagcacgatgacgccaacagggcactcatgggatcc
aatatgcagaggcaggctgttcccttgatgcaaagcgaggctcccctggtaggcacgggg
attgaggaaaaggtggccagggattccggagcctgcatactggccaagagggcaggcact
gtcacgtacgtggatgctaacaggatagaagttacgacggatgacggtcaggtcgacaaa
tattccttgatcaagttcagaaggtccaaccagggcaccgtgatacatcagcgccccata
gtcaagaaaggcgaaacggtgaaggccggagattttctggctgacggtcaggcggtcgac
cagggcgagcttgccctgggaagaaatgtcttggtggccttcatgggatgggagggctac
aactttgaagacgccatccttttgagcgagagattggtaaaagaggacgtctatacgtcc
atccacatagaggaatatgagatagatgcccgagataccaagctgggcccggaggaaata
acgagggatatacctaacgtcggcgaggatcagctgaaaaacctcgacgaaaggggaata
gtccgcataggagccgaggtaagggctggagatatattggttgggaaggtcacccctaag
ggagagaccgatcaaactcctgaggaaaagctgcttagggccatatttggagaaaaggcc
agggaggtcagggatacttcgctcagggtgccccacggagaaggcggcaaggtcgttgcc
gtcaagaggctttccagggacgaatacggcgatgagcttccccctggggttaacgaagtc
gtgaaggtcttccttgcccagctcaggaagataacggtaggcgacaagatggcgggacgt
cacgggaataagggagtggtctcccgaatattgccggtggaggacatgccctatctcccc
gacggcacgcccgtcgatgtggtgttaaaccccctgggagtgccgagccgaatgaacctg
ggacaggtcttggagacggtccttggctttgtggcctaccataacggatggagggtggcc
actcctgtatttgaaggagcctccgtagacgagatcttcaaatatatggaagagatacgc
caccgcaaatttcccagtctgacgagggacggaagcatcgttctttacgacggtagaacc
ggagagcccttcgagagcaaggtgaccgtggggcacatgtatatgctcaagctgatccac
ttggtggacgacaagatccatgcccgttccgtagggccctacagcttgataacccagcag
cccttgggaggaaaatcccagttcggcggccagcgcttcggcgagatggaagtctgggcc
ttggaagggtatggagcagctcatacgttgcaggagatgcttaccattaagtctgacgat
gtccaaggaaggcttaagaccttcgagagcatagtcaagggtcagaacataggtaaccca
ggcgtgccggaaagcttccgcgtgctgatcaaggagctccaggggttagctttagacgtg
caggtcctgtatgacgaccaaagcattggagacgtagaggaagaggaacgccacaagaag
aggcttgacaagcaggtgcccgaggcccaggagagaaaagaggcagtggttggtttggag
gcaaggatcttcggagatcctgatgatgatgaggaagatgaaatagaccctgagggggat
gatgcgtaa
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