Acetomicrobium mobile: Anamo_0467
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Entry
Anamo_0467 CDS
T02151
Name
(GenBank) DNA-directed RNA polymerase, beta'' subunit, predominant form
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amo
Acetomicrobium mobile
Pathway
amo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Anamo_0467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amo03021
]
Anamo_0467
03400 DNA repair and recombination proteins [BR:
amo03400
]
Anamo_0467
Enzymes [BR:
amo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Anamo_0467
Transcription machinery [BR:
amo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Anamo_0467
DNA repair and recombination proteins [BR:
amo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Anamo_0467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
CPxCG_zf
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AFM21121
UniProt:
I4BV14
LinkDB
All DBs
Position
459996..464957
Genome browser
AA seq
1653 aa
AA seq
DB search
MDKREIVGVRIRLASPERIRELSSGEVKRPETINYRTLRPEKDGLFCERIFGPVRSYECA
CGKYKRNGPKFKGIVCDRCGVEVTDSKVRRERMGHIELACPVVHIWYLRGIPSRLSLFLG
TTSKDLERVVYFAPLRRRELLYKVVMEGKRPDLVKKGDLIPACEERIHRHYDPKFKAEEA
YRITSVDDLPLKEGDILSAQQVSRYRTEYGDDLFKVEPAYTITEIEEGAQFKAGDIVSQG
DIDRLKKQGIKVEFERTAIKNQEAFMVIAAVRLPFAKDDILSASELQLYMKNYPGRFNSQ
QETIAIEDPSYIVIEGSNSPFEQCDIIVEREHKLCRAYDKDFMAGIGAESLLELLRRIDI
DELAILLREEIANSTGQKKRKLIKRLQVVEDFRKGDSKPEWMILTVLPVIPPDLRPMVQL
DGGRFATSDLNDLYRRVINRNNRLKKLQELNAPDMIIRNEKRMLQEAVDALIDNGRVGKA
VLGAGNRPLKSLTDLLRGKKGRFRQNLLGKRVDYSGRSVIVIGPELKLYQCGLPKEMALE
LFRPFVMHKLIEKGIASNVKGAKRIIERRRDEVWEALEEIIKDHPVMLNRAPTLHRLGIQ
AFEPLLMEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLESQAESRVLMLAGHNLLSPAH
GRPIVTPTQDVVLGIYYLTAMADGRKGEGMLFRDIEDALIALDHGVVHPNARVKMRWNGE
FIETSPGRALFNSVLHPSLRYINRQIAKKDLGALLDLAFDKIEHEDLVKMLDDIKLLGYK
WFTKSGISLNIDSVVIPPEKEEIVKEVLDKESELNVQYGMGILTEDEYLRQTELLWTEAA
SKIADCILQHMDEFNPLRMMVDSGARGSKSQVSQMAGIRGVMADPSGKVIDYPIISNFRE
GLNMLEYFISTHGARKGLADTALRTAKSGYLTRRLVDVSQDLIVIDEDCGTDKGVFMTPL
LQDGKVVISLSERIYGRTALEDVRHPGDGTIMVKAGDIIDQEKADAIEAAGVEGVWVRSP
MTCGLRNGVCQKCYGLDLSSRKPVSIGEAVGVVAAQSIGEPGTQLTMRTFHTGGVRITGE
DITQGLPRVEQLFEIRKPKKTALLSEIDGTVVEIREMEGKRKIVIQSSENADEKVTFNVP
SAQLLLVEEGDEVTKGQVLTEGYIDPQQLLDVKGIEAVQRYLVDGIQEVYKSQGVSINNK
HIEVILRKVAPVNKVRIADEGDTSYVVGEIVWLDELEREIEEIRSHNRRCMDDSVALLKG
KVLKDVIGKGSLEHAAQYKGEILDEQAIKILLQPGTVLSELVVEDQGEQVRVIVGESLFR
RELDGLELVEPYEGGNGIRIEAGVPLSIKQLALVTQDLRRPLQVMDTEKLLTLCDVTYLA
EDVVCDGMVIAPKDGLLTKDIALKLKEKSVKEIKVWKAPETVDLPDAIQEYLISKIWGRP
LSRAIDSNGNELEDIPPIVDGGIVRGIIEGKITAIEADGEIYSRQRILHSVMTDKIYGKV
LLEPVRDRLGDVIIPAGTEINQQVLERLIELEPTKIVVRPILALSQVEKLIQRVTFVRKL
RQEPIWKPVLLGITKAALATDSFMSAASFQQTAQALASAAVRGEIDYLRGLKENVIIGHL
IPAGTGATPNRNFDVVEVEEEVAHLPVSAERAR
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacgcgagatcgtgggcgttcgtatccgacttgcaagtccggagaggataagg
gaattgtcgagcggcgaagtgaagcggcccgagacgataaactacaggacccttaggcca
gagaaggacggtcttttttgtgagcgcatattcggtcccgtgaggagctacgaatgcgcc
tgcggaaaatacaagcgcaatggccctaaatttaagggcatagtgtgcgatcgttgcggc
gtggaagtgaccgacagcaaggtgaggcgcgagaggatggggcatatcgagcttgcctgc
cctgtggtgcatatatggtatctgcgcggaattcccagcaggctcagcctgtttttggga
acgacctccaaggacctggaaagggtcgtctactttgctccccttaggcggagggagtta
ctgtacaaggtcgtgatggaaggcaagaggcccgacttagtcaaaaaaggagacttgatc
ccggcatgcgaggagcgcatccacaggcattacgatcccaagttcaaagccgaagaggcc
tatcgcattaccagcgtcgacgacctgcccctaaaggagggggacatcctttccgctcaa
caggtctcccgctatcgtacggagtacggagacgacctcttcaaggtggagccggcctac
acaataacggagatcgaggagggtgctcagtttaaggccggggatatagtgagccaaggt
gacatagataggctcaagaaacagggcataaaggtagagtttgagaggactgccatcaaa
aatcaggaagccttcatggtgatagctgccgttcgtcttcccttcgcaaaggacgacatt
ttgtccgcctcggagctgcagctttacatgaaaaactatcccggcaggttcaactctcag
caggagacaattgccatcgaggatccgtcgtacatagtcatagagggcagcaattctccc
tttgaacagtgtgacattatagtggaaagggaacataagctgtgccgtgcctacgacaag
gattttatggcaggaatcggggccgaaagccttcttgaactgctcaggcgcatagacata
gatgagcttgccatattgcttcgcgaggagatagccaactctaccggccagaagaagcga
aagctcataaagcggctgcaggtcgtggaggacttcagaaagggagacagcaagcccgag
tggatgatcttgaccgttttgccggtcattccacctgatcttcgacccatggtccagctt
gacggcggaaggtttgccacatccgacttgaacgatctttacaggcgtgtcatcaatagg
aacaatcgtctgaagaagctgcaggagctgaatgctcctgacatgataataagaaacgaa
aaaagaatgctccaggaagcagttgacgccctcattgataacggcagggtgggcaaggcc
gtgttgggcgccgggaaccgtcctcttaagagcttgaccgacctgctaaggggaaagaaa
gggcgtttccgccaaaacctgctcggcaagcgcgtggactattcgggaaggtccgtcata
gtcataggaccggagttgaagctttatcagtgcggtttgcccaaggaaatggcactggaa
ttatttcgccccttcgtcatgcataagttgatcgaaaagggcatagcctcaaacgtcaag
ggggcaaagcgcataatagagcgcagaagggatgaggtttgggaggccctggaagagatc
ataaaggaccacccggtcatgctcaacagggcgccaacccttcaccgcctgggcatccag
gccttcgaaccgctcctaatggagggtaaggccatcaggctgcacccccttgtctgcacc
gcctttaacgccgacttcgacggagaccagatggccgtgcacgttcctttatcgctggaa
tctcaggcggaatccagggtcctgatgctagccggacacaacttgttgtcgcccgcgcac
ggacgtcccattgtgacgccaacccaggatgtcgtgctcggcatatattacctgactgcc
atggccgatggacgcaagggggagggcatgctcttcagggacatagaggacgcgctgata
gcccttgaccacggggtcgttcaccccaatgcgagagtgaagatgcgctggaacggggag
tttatagaaacttctcccggcagagctttgttcaacagcgtcttgcatccatctctcaga
tatataaacaggcagattgccaaaaaggatttaggtgctttgctcgatttggcttttgac
aagattgaacatgaagatctggtaaagatgctggatgacatcaagctattgggatataag
tggttcactaagagcggcatctccctaaatatagactcagtagtcattcctcccgagaag
gaggagatagtgaaggaggtcctcgataaggagagcgagctcaacgttcagtacggcatg
ggcatcctgaccgaggacgagtacctgagacagacggagttgctttggactgaggcggcc
tcgaagattgccgactgtatattgcagcatatggatgagtttaatcccttgaggatgatg
gtcgattcgggagctcgcggtagcaagagccaggtctcgcagatggccggcatccgggga
gtcatggccgatccttcgggtaaagtcatagattacccgattatttccaacttcagggaa
ggcctgaacatgttggaatacttcatttcgactcacggagcaaggaaggggctcgccgat
acggccttgaggacggccaagtccggatatttaacgaggcgtctcgtcgatgtatcgcaa
gacttgatcgtcatcgatgaggattgcgggacggataagggggtattcatgactccgctg
cttcaagacggcaaggtcgtgatttccttaagcgaaaggatatacggaagaactgccctt
gaggatgtgcgtcaccccggagatgggacaattatggtaaaggccggagatatcatcgat
caggaaaaggccgatgccatagaagctgcaggcgtagaaggtgtatgggtgagaagcccg
atgacttgcgggctacgtaacggcgtatgccaaaagtgctacggtttggatctttcctca
agaaagcccgtgtccattggcgaggcagtgggcgtagtggcagcccagtcgatcggagag
ccgggaacgcagcttacgatgaggacgttccataccggcggcgtcaggattacaggagag
gatatcactcagggtctgcctcgtgtcgagcagcttttcgagatcaggaagcccaaaaag
acagcccttctttccgagatcgacggcacggtcgtcgagattcgggagatggaaggcaag
aggaagatcgtcatccagtccagtgaaaacgccgacgagaaggtgacgttcaacgtgcct
tccgcccaactgcttcttgttgaagagggagatgaggtgacgaagggtcaggtcttgacg
gagggttacatcgatcctcagcaactgctggatgttaagggcatagaggccgttcaaagg
taccttgtcgatggcattcaagaggtctacaagtctcaaggcgtttccataaacaacaag
cacatcgaggtaatcttgcgcaaggttgcccctgttaataaggtgcgcatagccgacgaa
ggagatacctcttacgtggtcggcgaaatagtatggctggacgagctggaaagggaaata
gaggaaattaggagccataataggcgatgcatggacgattctgtcgccttgctgaagggc
aaagtcctcaaagacgtgatcggcaagggttcgttggagcacgcagcgcaatataaagga
gaaatcttggacgaacaggcaataaagatccttcttcagccgggcacggtgctttccgag
ctcgtcgtcgaagaccagggagagcaggttcgcgtaatagtgggagagtcgctgttcagg
agggaactcgatgggttggagctggttgaaccctatgagggcggcaacggcatacgcata
gaggcaggcgtgcccctgagcattaagcagcttgcactggttacccaggatttgcgcagg
ccgctgcaggtaatggatacggagaaactccttaccctttgcgatgtcacctatctggcc
gaggacgtagtttgcgatggaatggtcatagcccccaaggacggtcttttgacaaaggac
atagctttgaagttaaaggagaaatcggtaaaggagatcaaggtatggaaggctccggag
accgtcgatttgcctgacgccatccaggaatacctcatcagcaaaatatggggtcggcct
ttaagtagggcaatagattcgaacggcaacgagcttgaagatatcccccccatcgttgat
ggaggtattgttaggggtataatcgaaggcaagataaccgccatcgaggccgacggggag
atctattccaggcaaaggatattgcacagcgttatgaccgataaaatttacggcaaggtc
ttgctggaacccgtaagggatcgccttggtgacgtcattatccctgcgggaaccgagata
aatcagcaagtcctcgagcggcttatagagcttgaaccgacgaagatagtggtaagaccg
atactcgctctctctcaagtcgagaagttgatccaaagggtgacctttgtgcggaagctt
cgccaggaacccatatggaagccggtattgctcggcatcaccaaggcggctttggcgacg
gacagttttatgtctgcagcatccttccagcagacagcccaggctcttgcctctgctgcc
gtcagaggcgaaatagactacctcagaggcctgaaggaaaacgtaataataggtcatctg
atcccggctggcactggagcaactcccaataggaactttgatgttgtggaggttgaagaa
gaggtcgctcacttgccagtttccgctgaacgtgccaggtaa
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integrated database retrieval system
