Adhaeretor mobilis: HG15A2_07250
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Entry
HG15A2_07250 CDS
T07351
Symbol
mfd
Name
(GenBank) Transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amob
Adhaeretor mobilis
Pathway
amob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HG15A2_07250 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amob03400
]
HG15A2_07250 (mfd)
Enzymes [BR:
amob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HG15A2_07250 (mfd)
DNA repair and recombination proteins [BR:
amob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
HG15A2_07250 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
RecG_dom3_C
Cas3-like_C_2
AAA_30
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QDS97464
UniProt:
A0A517MRF7
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All DBs
Position
883715..886996
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AA seq
1093 aa
AA seq
DB search
MAKTSEATETASPVDASAAAAIRDLPGYLETLDDFTDVLTSLKEGHGGTLGGVWGSSRAL
VAAALQRRCEGTLLVVLPHAADIDVFASDCELFTSASIATLPAWETDAGERVLHDEIFGT
RLRVLKALAKPSSSRGPLEVVITSIQSLLQPVPSEDDLAAATRNIAVGEALDEAELARWL
VEHGCTNTTAVELPGEFSVRGGILDVFPPDSLNPFRIELFGDEIESIRTFDVATQRSLEN
LQIAPITMLAPSSESRTHFASYLPQGSWVLLVEPNELEEEGRYYHKRQENAENFFATSTT
LAELYKFPSVTASGVPSGSYETTAHLQFESVEQFSGDVSRVRNELEVAAAGQQVFLVCDV
EEEAQRLAEVFAESPLLAQGDLHFTLGHLRSGFRIVGRQTVLISAAELFQRQELARGSTR
QTGRAIDSFLELRDGDLVVHLAHGIGRYRGLRLIEKADQAEEHLELEYDGGTRIFVPVSK
IELVQKYIGGRKAKPKLAKIGGKSWARQKLAAEKAVVDMAADMIQVQATRAARPGIAFPD
DSQWMDEFEAAFPYQETPDQLTAIAAIKGDMQEHKPMDRLLCGDVGFGKTEMAIRAAFKA
IDAGYQVAVLAPTTVLAEQHRRTFTQRMAEFPFKIACLSRFCTAKEQREIVKGAAEGTID
LVIGTHRLASPDVSFQNLGLLVIDEEQRFGVAVKEKLKALRAAVDVLTMTATPIPRTLHM
SLLGVRSISNLETAPKDRLAVETRVSRFDETLLRHAILRELNRDGQIYFVHNRIHDIQKV
SQRLQQIVPEATVGIGHGQMSAGELEEVMLGFVRKDYDILLATTIIESGLDIPNANTIFI
DDADRYGLADLHQLRGRVGRWKHRAYCYLLVDENRHLSPEAARRLRAIEEFSQMGAGFAI
AMRDLELRGAGNILGTQQSGHIATVGYELYCTLLEKAVRQLKQLPPKQSVDVSVDLPIMA
YLPGSYVPDMRMKIDLYRRLARVATEEELDDFSGELADRFGTPTEAVEELLRVTRLRIWA
YQHDIHAIHLEDQYVVLTFSERAKIERLVASSAGRLRIADKRSAYLPLIADVDDSQAVLA
EVESLLQPAGVGA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaacatctgaggcgacggaaaccgcctccccggtcgatgcgagcgccgctgcg
gcgattcgtgacttgcccggctatcttgaaacgctcgacgactttaccgacgtactcacc
agcctcaaagaagggcacggagggacgctcggcggagtctgggggtcttcgcgcgcactg
gtcgcggccgctttgcagcggcgatgcgagggcacactgctggtggtcctacctcacgcg
gccgacattgatgtatttgctagcgattgcgagctcttcacttcggccagcatcgcaacg
ctgcccgcttgggaaaccgacgccggcgagcgtgtgctacacgacgaaatcttcggtacc
cgactgcgcgtactcaaggctctcgctaaacctagttctagccgtgggccgcttgaagtt
gttatcacgtcgattcagagtctcttgcagccagtgcctagcgaagatgatctcgcagct
gcaacgcggaatattgccgtcggcgaggcgctcgatgaggcggaattggctcgctggctc
gtcgagcatggctgcacgaacacgacggcagtggagctgccaggtgagttctctgtgcgt
ggcggtattctcgatgtgttcccgcccgattcgctcaatccgtttcgtattgaattattc
ggcgacgagatcgaatcgattcgcacattcgacgtggccacacagcgcagcttagaaaac
ttgcaaattgcgccgatcacgatgcttgctccgagcagcgaaagccgcacgcactttgcc
agctatttgcctcaaggcagctgggtgttgctggtggaacccaacgagcttgaggaggag
ggacgctactaccacaaacgccaagagaatgcagagaattttttcgccacgagcaccaca
cttgccgagctgtacaaattcccctcagtcaccgcttccggcgtgccgagtggttcttac
gagacgaccgcacacttgcagtttgaatcggtcgagcagttctccggtgacgtgagccgg
gttcgcaatgaattggaagtggccgccgctggtcagcaagtatttctagtttgtgacgtc
gaggaggaagcccagcgactagcagaggtgtttgccgagagcccgttgctagcccagggc
gatctgcacttcacccttggccacttgcgaagcggctttcgtatcgtgggccgacaaacg
gtactcatcagtgcggctgaattgttccagcgccaagaactggcccgcggaagcacgcgc
caaacgggtcgcgcgatcgacagttttcttgagctgcgcgatggcgatttggtcgtccac
ttggcacacggcatcggacgctatcgcggtctcagactcatcgagaaagcggaccaagcc
gaagagcatctggagctcgagtacgacggcggcacgcgcatcttcgtgcctgtcagcaag
atcgagctagtccaaaagtacatcggcggccgcaaggcaaagccgaagctggccaaaatt
ggtggcaaatcgtgggcacggcaaaagctggcggctgagaaagccgtcgtcgatatggcc
gccgacatgatccaagtgcaagccacccgtgccgctcgcccgggtatcgctttcccagac
gatagtcagtggatggatgaattcgaagcagctttcccgtatcaagagacgcctgatcag
ctgactgctattgccgccatcaaaggcgacatgcaagaacacaagccgatggaccgcctc
ctctgcggggatgttggcttcggcaagaccgagatggccattcgtgcagcgttcaaagcc
atcgacgcgggctatcaagtcgccgtgcttgcaccgaccacagtgctggccgaacaacat
cgccgcacattcacccaacgcatggctgagttccccttcaagattgcttgcctgtctcgc
ttctgcaccgccaaggaacaacgcgagatcgtgaaaggcgctgctgagggaaccatcgat
ttggtgatcggcacgcatcgcttggcttcgcctgatgtttcattccagaacttgggctta
ctggtgatcgacgaggagcaacgctttggcgtcgcagtcaaggaaaaactgaaagccctg
cgtgcagccgtcgatgtgctcacgatgacggcgacgcccattccgcgcacgttgcacatg
tcgctgttgggcgtgcggagtatttccaacttggaaacggcccccaaagatcgtctcgcg
gtagaaactcgcgtatcacgtttcgacgagacgctcctacgacacgcaatcctgcgagaa
ctaaatcgcgatggacagatctactttgtccacaatcgaattcacgacatccaaaaagta
tcacaacgcttgcaacagatcgtgcctgaagcgaccgtcggtatcggtcatgggcagatg
agtgctggagagttagaggaagtcatgctcggctttgtgcgcaaagactacgacatcctg
ctagcaaccacgatcatcgagagcgggctcgacattcccaacgcgaataccattttcatc
gacgatgcggatcgctacggccttgccgacctgcaccaactgcgtgggcgcgtcggccgt
tggaagcaccgggcgtattgttatttgctagtcgatgagaatcgccacttgtcaccggaa
gccgcacgacgcctgcgggcgattgaggaatttagccagatgggtgccggctttgctatc
gccatgcgcgacctggaacttcgcggtgccgggaacatcctcggcacgcagcaaagcggg
catatcgccacggtggggtacgaactgtactgcacgctactcgaaaaggcggtccgccaa
ttgaagcaactgccaccgaaacaatcggtggatgtgtcggttgatctacccatcatggct
tacctgccgggcagctatgtgccggacatgcggatgaagatcgatctctatcgccgcctc
gcacgcgtagccaccgaagaggaactcgacgacttcagcggtgagctggccgaccggttc
ggcacaccgaccgaagcggttgaggagctgctgcgcgtcacgcggctgcgaatctgggcc
taccagcacgatatccatgcgattcatctggaggaccagtacgtcgtactaaccttcagc
gagcgggcgaaaatcgaacgcctagttgctagcagtgccggaagactgcgcattgccgac
aagcgtagcgcgtatctgccattgatcgcagatgtcgacgattcgcaagcggtgctggcg
gaagtggaatcgctcttgcaaccagcgggggtcggtgcctaa
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